FFCP PHASE1:Hg19::chr1:160103733..160103769,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:160103733..160103769,+ | |||
|coexpression_cluster_id=C876 | |||
|description=CAGE_peak_at_chr1:160103733..160103769,+ | |description=CAGE_peak_at_chr1:160103733..160103769,+ | ||
|id=chr1:160103733..160103769,+ | |id=chr1:160103733..160103769,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.31e-19;82!UBERON:0006241;3.51e-14;3!UBERON:0003057;3.51e-14;3!UBERON:0002532;9.58e-07;206!UBERON:0010316;9.58e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.83e-70!115;UBERON:0001049!7.63e-63!57;UBERON:0005068!7.63e-63!57;UBERON:0006241!7.63e-63!57;UBERON:0007135!7.63e-63!57;UBERON:0001017!3.61e-53!82;UBERON:0005743!3.33e-52!86;UBERON:0002616!2.63e-51!59;UBERON:0002780!1.27e-49!41;UBERON:0001890!1.27e-49!41;UBERON:0006240!1.27e-49!41;UBERON:0003075!7.43e-49!86;UBERON:0007284!7.43e-49!86;UBERON:0003080!3.42e-48!42;UBERON:0000955!5.17e-48!69;UBERON:0006238!5.17e-48!69;UBERON:0002346!7.22e-48!90;UBERON:0000073!9.34e-46!94;UBERON:0001016!9.34e-46!94;UBERON:0002020!3.45e-44!34;UBERON:0003528!3.45e-44!34;UBERON:0001893!4.47e-44!34;UBERON:0002791!2.05e-42!33;UBERON:0001869!2.15e-40!32;UBERON:0002619!9.01e-34!22;UBERON:0003056!1.05e-33!61;UBERON:0001950!5.28e-30!20;UBERON:0000956!4.44e-29!25;UBERON:0000203!4.44e-29!25;UBERON:0000153!5.86e-28!129;UBERON:0007811!5.86e-28!129;UBERON:0000033!2.66e-27!123;UBERON:0000924!5.69e-25!173;UBERON:0006601!5.69e-25!173;UBERON:0004121!6.54e-25!169;UBERON:0000025!1.34e-17!194;UBERON:0002308!7.58e-17!9;UBERON:0000125!7.58e-17!9;UBERON:0002420!1.04e-16!9;UBERON:0007245!1.04e-16!9;UBERON:0010009!1.04e-16!9;UBERON:0010011!1.04e-16!9;UBERON:0000454!1.04e-16!9;UBERON:0003076!3.53e-15!15;UBERON:0003057!3.53e-15!15;UBERON:0004111!1.38e-14!241;UBERON:0009663!3.49e-13!7;UBERON:0002298!1.19e-12!8;UBERON:0000477!1.55e-11!286;UBERON:0000200!1.84e-11!6;UBERON:0001871!1.95e-11!7;UBERON:0000349!9.13e-11!5;UBERON:0000483!1.42e-10!309;UBERON:0000064!1.65e-10!219;UBERON:0000119!2.60e-10!312;UBERON:0001872!2.92e-10!5;UBERON:0004733!3.18e-10!12;UBERON:0002028!3.18e-10!12;UBERON:0007277!3.18e-10!12;UBERON:0000475!8.24e-10!365;UBERON:0004732!2.68e-09!13;UBERON:0000369!5.49e-08!4;UBERON:0002435!5.49e-08!4;UBERON:0000204!5.49e-08!4;UBERON:0010082!5.49e-08!4;UBERON:0000062!1.94e-07!511;UBERON:0001896!2.60e-07!3;UBERON:0005290!2.60e-07!3;UBERON:0010096!2.60e-07!3;UBERON:0002240!3.12e-07!3;UBERON:0000988!3.18e-07!3;UBERON:0006331!3.88e-07!3;UBERON:0001894!4.65e-07!7;UBERON:0006222!4.65e-07!7;UBERON:0000922!5.59e-07!612;UBERON:0000481!9.12e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.57e-45;53!UBERON:0002616;1.57e-45;53!UBERON:0002619;4.54e-44;22!UBERON:0001893;2.52e-41;34!UBERON:0003528;2.28e-39;34!UBERON:0002020;2.28e-39;34!UBERON:0002780;3.94e-39;41!UBERON:0001890;3.94e-39;41!UBERON:0000956;1.51e-38;25!UBERON:0000203;1.51e-38;25!UBERON:0001950;1.44e-36;20!UBERON:0002791;3.91e-36;32!UBERON:0001869;5.55e-36;32!UBERON:0002298;2.80e-26;6!UBERON:0000955;1.05e-23;68!UBERON:0001017;3.13e-23;75!UBERON:0004733;4.18e-22;12!UBERON:0002028;4.18e-22;12!UBERON:0001016;7.78e-22;83!UBERON:0000349;1.76e-21;5!UBERON:0004732;2.64e-20;13!UBERON:0001896;2.52e-14;3!UBERON:0005290;2.52e-14;3!UBERON:0007023;2.65e-14;114!UBERON:0002240;3.51e-14;3!UBERON:0005174;3.51e-14;3!UBERON:0001137;3.51e-14;3!UBERON:0001872;7.12e-14;5!UBERON:0000988;1.01e-13;3!UBERON:0000125;5.65e-12;9!UBERON:0002308;5.65e-12;9!UBERON:0002420;8.68e-12;9!UBERON:0007245;8.68e-12;9!UBERON:0010009;8.68e-12;9!UBERON:0010011;8.68e-12;9!UBERON:0000454;8.68e-12;9!UBERON:0002680;1.07e-11;9!UBERON:0001895;1.07e-11;9!UBERON:0001954;3.31e-10;2!UBERON:0003022;3.31e-10;2!UBERON:0002421;3.31e-10;2!UBERON:0002600;3.31e-10;2!UBERON:0001871;7.58e-10;6!UBERON:0011216;8.18e-10;132!UBERON:0002148;1.33e-09;2!UBERON:0006331;1.33e-09;2!UBERON:0009662;1.33e-09;2!UBERON:0001876;2.95e-09;2!UBERON:0002021;3.28e-08;5!UBERON:0010314;3.53e-08;132!UBERON:0000200;6.54e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.82e-86,56;UBERON:0005068,5.82e-86,56;UBERON:0006241,5.82e-86,56;UBERON:0007135,5.82e-86,56;UBERON:0000073,3.98e-75,53;UBERON:0002616,3.98e-75,53;UBERON:0000955,4.14e-64,68;UBERON:0006238,4.14e-64,68;UBERON:0001017,7.56e-64,81;UBERON:0003075,8.02e-64,82;UBERON:0007284,8.02e-64,82;UBERON:0002346,1.62e-60,86;UBERON:0001016,8.22e-57,89;UBERON:0007023,8.48e-56,114;UBERON:0002780,1.64e-53,41;UBERON:0001890,1.64e-53,41;UBERON:0003080,1.64e-53,41;UBERON:0006240,1.64e-53,41;UBERON:0003528,1.68e-49,34;UBERON:0002020,1.68e-49,34;UBERON:0001893,2.54e-49,34;UBERON:0010371,9.36e-49,104;UBERON:0002619,3.69e-44,22;UBERON:0002791,1.06e-42,32;UBERON:0001869,1.72e-42,32;UBERON:0010314,1.16e-41,132;UBERON:0000956,1.26e-38,25;UBERON:0000203,1.26e-38,25;UBERON:0001950,1.12e-36,20;UBERON:0003056,2.29e-34,61;UBERON:0003076,1.56e-33,15;UBERON:0003057,1.56e-33,15;UBERON:0004121,1.19e-31,171;UBERON:0000924,1.19e-31,171;UBERON:0006601,1.19e-31,171;UBERON:0002298,1.31e-26,6;UBERON:0011216,2.77e-25,223;UBERON:0000025,2.46e-24,192;UBERON:0004733,2.42e-22,12;UBERON:0002028,2.42e-22,12;UBERON:0007277,2.42e-22,12;UBERON:0000349,6.43e-22,5;UBERON:0004732,1.60e-20,13;UBERON:0004111,4.06e-19,240;UBERON:0001896,2.77e-14,3;UBERON:0005290,2.77e-14,3;UBERON:0010096,2.77e-14,3;UBERON:0000483,3.19e-14,306;UBERON:0002240,4.12e-14,3;UBERON:0005174,4.12e-14,3;UBERON:0001137,4.12e-14,3;UBERON:0000988,4.31e-14,3;UBERON:0000119,5.30e-14,309;UBERON:0001872,6.14e-14,5;UBERON:0000125,3.63e-12,9;UBERON:0002308,3.63e-12,9;UBERON:0002420,5.41e-12,9;UBERON:0007245,5.41e-12,9;UBERON:0010009,5.41e-12,9;UBERON:0010011,5.41e-12,9;UBERON:0000454,5.41e-12,9;UBERON:0002680,6.52e-12,9;UBERON:0001895,6.52e-12,9;UBERON:0010092,6.52e-12,9;UBERON:0001954,3.63e-10,2;UBERON:0003022,3.63e-10,2;UBERON:0002421,3.63e-10,2;UBERON:0002600,3.63e-10,2;UBERON:0001871,5.13e-10,6;UBERON:0002148,6.77e-10,2;UBERON:0006331,6.77e-10,2;UBERON:0009662,6.77e-10,2;UBERON:0001876,1.42e-09,2;UBERON:0002021,4.66e-08,5;UBERON:0000923,2.43e-07,560;UBERON:0010316,2.43e-07,560;UBERON:0005291,2.43e-07,560;UBERON:0006598,2.43e-07,560;UBERON:0010317,2.43e-07,560;UBERON:0002532,2.43e-07,560;UBERON:0002050,3.18e-07,564;UBERON:0000200,6.29e-07,6;UBERON:0005423,9.74e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0,0,1.9882952955326,1.68803299692615,0,0,0.211125408127993,0.597743964753209,0,0,0.20453736500431,0,0,0,0,0,0.493217028184668,0,0,2.90799823828566,1.11321717794222,0,0,0,0,0,0,0,0.689486746482929,0,0,0.885741385813839,0.964771509003264,0,1.54810963903714,1.47773809476774,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0.123563938946503,0,3.2352543830725,0,1.1713222286267,0,0,0,0.789168805698781,0,0.30607276163049,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,2.02594547058812,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,3.69644523008381,0,0,0,1.39641200636127,2.06244381610515,0,0.199679000498991,0.858452096273142,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0.0846733320657845,5.56660782866512,2.17925449778521,0,0.137539436597234,0,0,0,2.36923270966296,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71494208359256,1.98348902614035,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.488105059607853,1.752673029891,2.29363678276028,2.44043913381075,5.21609784707621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86264752779733,0,2.55414174491442,1.02558182120378,0.756215088665154,1.1756732918917,5.32869630585109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,1.56215619722769,1.44680757550829,1.64881106504158,3.28184885410932,0,0.496211178389294,0.175871244359621,0,0,2.35398605553177,0.606965604236632,0,0,0,0,2.65081958609644,0.855046056317038,0,0,0.313972371402056,0.471346769748006,0,0.913158720509496,0,0,0.929195074296532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.76914604625474,1.02662806856247,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0,0,0.490296643507811,0,3.33724394095407,6.83206720752298,1.2679671827502,0,0,0,0,0.178553938605658,0,0,0,0,2.00675416412032,0,1.35982980381829,1.74540276136151,0,0,0,0,0.252332849670158,0,0.253397002022874,0,0,0,0,0.151557396436479,0,0.829169439458779,3.72358785102823,1.0661699095049,0.476128862927481,0,0,0,0.0636471582781649,0,1.95945073107265,0,0.0673520530145875,0,1.66330178273007,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0,0,1.9882952955326,1.68803299692615,0,0,0.211125408127993,0.597743964753209,0,0,0.20453736500431,0,0,0,0,0,0.493217028184668,0,0,2.90799823828566,1.11321717794222,0,0,0,0,0,0,0,0.689486746482929,0,0,0.885741385813839,0.964771509003264,0,1.54810963903714,1.47773809476774,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0.123563938946503,0,3.2352543830725,0,1.1713222286267,0,0,0,0.789168805698781,0,0.30607276163049,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,2.02594547058812,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,3.69644523008381,0,0,0,1.39641200636127,2.06244381610515,0,0.199679000498991,0.858452096273142,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0.0846733320657845,5.56660782866512,2.17925449778521,0,0.137539436597234,0,0,0,2.36923270966296,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71494208359256,1.98348902614035,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.488105059607853,1.752673029891,2.29363678276028,2.44043913381075,5.21609784707621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86264752779733,0,2.55414174491442,1.02558182120378,0.756215088665154,1.1756732918917,5.32869630585109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,1.56215619722769,1.44680757550829,1.64881106504158,3.28184885410932,0,0.496211178389294,0.175871244359621,0,0,2.35398605553177,0.606965604236632,0,0,0,0,2.65081958609644,0.855046056317038,0,0,0.313972371402056,0.471346769748006,0,0.913158720509496,0,0,0.929195074296532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.76914604625474,1.02662806856247,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0,0,0.490296643507811,0,3.33724394095407,6.83206720752298,1.2679671827502,0,0,0,0,0.178553938605658,0,0,0,0,2.00675416412032,0,1.35982980381829,1.74540276136151,0,0,0,0,0.252332849670158,0,0.253397002022874,0,0,0,0,0.151557396436479,0,0.829169439458779,3.72358785102823,1.0661699095049,0.476128862927481,0,0,0,0.0636471582781649,0,1.95945073107265,0,0.0673520530145875,0,1.66330178273007,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr1:160103733..160103769,+ | |short_description=p@chr1:160103733..160103769,+ | ||
}} | }} |
Latest revision as of 23:15, 27 July 2015
Short description: | p@chr1:160103733..160103769, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160103733..160103769, + |
Coexpression cluster: | C876_skeletal_spinal_medulla_hippocampus_parietal_thalamus_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data