FFCP PHASE1:Hg19::chr1:159796561..159796581,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56833 | |EntrezGene=56833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21391 | |HGNC=21391 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000368104_5end | |association_with_transcript=-19bp_to_ENST00000368104_5end | ||
|cluster_id=chr1:159796561..159796581,+ | |||
|coexpression_cluster_id=C1153 | |||
|description=CAGE_peak_4_at_SLAMF8_5end | |description=CAGE_peak_4_at_SLAMF8_5end | ||
|id=chr1:159796561..159796581,+ | |id=chr1:159796561..159796581,+ | ||
|ontology_enrichment_celltype=CL:0002009!5.68e-26!65;CL:0000557!5.54e-24!71;CL:0002194!9.21e-24!63;CL:0000576!9.21e-24!63;CL:0000040!9.21e-24!63;CL:0000559!9.21e-24!63;CL:0000839!2.09e-21!70;CL:0000766!7.25e-20!76;CL:0002057!7.42e-16!42;CL:0000763!1.65e-14!112;CL:0000049!1.65e-14!112;CL:0000860!2.81e-14!45;CL:0000738!4.52e-13!140;CL:0002087!9.77e-13!119;CL:0002031!6.17e-12!124;CL:0000037!9.36e-10!172;CL:0000566!9.36e-10!172;CL:0000988!1.76e-08!182;CL:0002032!1.83e-08!165;CL:0000837!1.83e-08!165;CL:0000840!3.06e-07!5;CL:0001029!3.06e-07!5 | |ontology_enrichment_celltype=CL:0002009!5.68e-26!65;CL:0000557!5.54e-24!71;CL:0002194!9.21e-24!63;CL:0000576!9.21e-24!63;CL:0000040!9.21e-24!63;CL:0000559!9.21e-24!63;CL:0000839!2.09e-21!70;CL:0000766!7.25e-20!76;CL:0002057!7.42e-16!42;CL:0000763!1.65e-14!112;CL:0000049!1.65e-14!112;CL:0000860!2.81e-14!45;CL:0000738!4.52e-13!140;CL:0002087!9.77e-13!119;CL:0002031!6.17e-12!124;CL:0000037!9.36e-10!172;CL:0000566!9.36e-10!172;CL:0000988!1.76e-08!182;CL:0002032!1.83e-08!165;CL:0000837!1.83e-08!165;CL:0000840!3.06e-07!5;CL:0001029!3.06e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000235;4.12e-32;6!CL:0000473;1.49e-28;39!CL:0000234;1.49e-28;39!CL:0002619;2.65e-17;3!CL:0000860;1.02e-16;33!CL:0002057;1.02e-16;33!CL:0000576;2.31e-15;48!CL:0000840;1.68e-14;5!CL:0000766;8.83e-12;69!CL:0000990;1.05e-09;8!CL:0000451;5.91e-08;10!CL:0000346;1.17e-07;3!CL:1000428;1.17e-07;3!CL:0000763;4.22e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.94e-45,61;CL:0002194,4.19e-43,59;CL:0000576,4.19e-43,59;CL:0000040,4.19e-43,59;CL:0000559,4.19e-43,59;CL:0000557,5.83e-41,67;CL:0000839,4.58e-38,66;CL:0000766,1.63e-34,72;CL:0000235,4.84e-32,6;CL:0000473,3.87e-29,48;CL:0000234,3.87e-29,48;CL:0000763,1.48e-23,108;CL:0000049,1.48e-23,108;CL:0002031,1.08e-20,120;CL:0002087,8.07e-20,115;CL:0000738,1.17e-17,136;CL:0002619,2.44e-17,3;CL:0000840,1.65e-14,5;CL:0001029,1.65e-14,5;CL:0002032,4.07e-14,161;CL:0000837,4.07e-14,161;CL:0000860,1.03e-13,42;CL:0002057,1.03e-13,42;CL:0000037,2.58e-13,168;CL:0000988,2.24e-12,177;CL:0000990,1.04e-09,8;CL:0000451,5.85e-08,10;CL:0000346,9.85e-08,3;CL:1000428,9.85e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.57e-11;42!CL:0000049;7.55e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.93e-33!115;UBERON:0002390!7.39e-21!102;UBERON:0003061!7.39e-21!102;UBERON:0002193!8.37e-21!112;UBERON:0002371!7.66e-20!80;UBERON:0001474!1.39e-17!86;UBERON:0002405!5.22e-17!115;UBERON:0004765!5.29e-14!101;UBERON:0001434!5.29e-14!101;UBERON:0001049!3.94e-10!57;UBERON:0005068!3.94e-10!57;UBERON:0006241!3.94e-10!57;UBERON:0007135!3.94e-10!57;UBERON:0000062!6.10e-10!511;UBERON:0002298!1.26e-09!8;UBERON:0003081!1.04e-08!216;UBERON:0003076!1.29e-08!15;UBERON:0003057!1.29e-08!15;UBERON:0002616!8.54e-08!59;UBERON:0000467!1.50e-07!625;UBERON:0000480!1.74e-07!626;UBERON:0004733!1.95e-07!12;UBERON:0002028!1.95e-07!12;UBERON:0007277!1.95e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.17e-07;3!UBERON:0001992;1.17e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.49e-35,76;UBERON:0002405,2.02e-33,93;UBERON:0001474,1.34e-32,82;UBERON:0004765,2.89e-29,90;UBERON:0002390,7.15e-29,98;UBERON:0003061,7.15e-29,98;UBERON:0002193,4.80e-28,108;UBERON:0001434,7.66e-26,100;UBERON:0002204,2.00e-13,167;UBERON:0003081,2.51e-12,203;UBERON:0000926,2.99e-08,315;UBERON:0004120,2.99e-08,315;UBERON:0006603,2.99e-08,315;UBERON:0000412,9.85e-08,3;UBERON:0001992,9.85e-08,3 | |||
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|short_description=p4@SLAMF8 | |short_description=p4@SLAMF8 | ||
}} | }} |
Latest revision as of 23:33, 17 September 2015
Short description: | p4@SLAMF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLAMF8_5end |
Coexpression cluster: | C1153_Monocytederived_CD14_Dendritic_Macrophage_acute_spleen_lymph |
Association with transcript: | -19bp_to_ENST00000368104_5end |
EntrezGene: | SLAMF8 |
HGNC: | 21391 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.49e-35 | 76 |
immune system | 2.02e-33 | 93 |
bone element | 1.34e-32 | 82 |
skeletal element | 2.89e-29 | 90 |
hematopoietic system | 7.15e-29 | 98 |
blood island | 7.15e-29 | 98 |
hemolymphoid system | 4.80e-28 | 108 |
skeletal system | 7.66e-26 | 100 |
musculoskeletal system | 2.00e-13 | 167 |
lateral plate mesoderm | 2.51e-12 | 203 |
mesoderm | 2.99e-08 | 315 |
mesoderm-derived structure | 2.99e-08 | 315 |
presumptive mesoderm | 2.99e-08 | 315 |
dermal papilla | 9.85e-08 | 3 |
papillary layer of dermis | 9.85e-08 | 3 |