FFCP PHASE1:Hg19::chr1:157670658..157670667,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115352 | |EntrezGene=115352 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18506 | |HGNC=18506 | ||
|TSSclassifier=strong | |||
|UniProt=Q96P31 | |UniProt=Q96P31 | ||
|association_with_transcript=-11bp_to_ENST00000368184,NM_052939,uc001fqx.3,uc001fqy.3,uc001fqz.3,uc001frb.2,uc009wsn.2,uc009wso.2_5end | |association_with_transcript=-11bp_to_ENST00000368184,NM_052939,uc001fqx.3,uc001fqy.3,uc001fqz.3,uc001frb.2,uc009wsn.2,uc009wso.2_5end | ||
|cluster_id=chr1:157670658..157670667,- | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_4_at_FCRL3_5end | |description=CAGE_peak_4_at_FCRL3_5end | ||
|id=chr1:157670658..157670667,- | |id=chr1:157670658..157670667,- | ||
|ontology_enrichment_celltype=CL:0000838!2.43e-34!52;CL:0000542!1.62e-33!53;CL:0000051!1.62e-33!53;CL:0000791!9.46e-28!18;CL:0000789!9.46e-28!18;CL:0002420!9.46e-28!18;CL:0002419!9.46e-28!18;CL:0000790!9.46e-28!18;CL:0000625!1.45e-26!11;CL:0000738!3.85e-23!140;CL:0002087!3.91e-22!119;CL:0000236!7.68e-19!14;CL:0000084!9.21e-19!25;CL:0000827!9.21e-19!25;CL:0002031!5.81e-17!124;CL:0000037!1.68e-16!172;CL:0000566!1.68e-16!172;CL:0000988!6.38e-15!182;CL:0002032!1.35e-14!165;CL:0000837!1.35e-14!165;CL:0000945!1.31e-11!24;CL:0000826!1.31e-11!24;CL:0000623!1.09e-08!3;CL:0000825!1.09e-08!3;CL:0000842!4.74e-08!3;CL:0000767!8.68e-08!3;CL:0000898!1.20e-07!3;CL:0002619!5.41e-07!3;CL:0000094!5.42e-07!8 | |ontology_enrichment_celltype=CL:0000838!2.43e-34!52;CL:0000542!1.62e-33!53;CL:0000051!1.62e-33!53;CL:0000791!9.46e-28!18;CL:0000789!9.46e-28!18;CL:0002420!9.46e-28!18;CL:0002419!9.46e-28!18;CL:0000790!9.46e-28!18;CL:0000625!1.45e-26!11;CL:0000738!3.85e-23!140;CL:0002087!3.91e-22!119;CL:0000236!7.68e-19!14;CL:0000084!9.21e-19!25;CL:0000827!9.21e-19!25;CL:0002031!5.81e-17!124;CL:0000037!1.68e-16!172;CL:0000566!1.68e-16!172;CL:0000988!6.38e-15!182;CL:0002032!1.35e-14!165;CL:0000837!1.35e-14!165;CL:0000945!1.31e-11!24;CL:0000826!1.31e-11!24;CL:0000623!1.09e-08!3;CL:0000825!1.09e-08!3;CL:0000842!4.74e-08!3;CL:0000767!8.68e-08!3;CL:0000898!1.20e-07!3;CL:0002619!5.41e-07!3;CL:0000094!5.42e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.14e-46;11!CL:0000791;3.58e-44;18!CL:0000789;3.58e-44;18!CL:0002419;3.58e-44;18!CL:0000542;6.78e-34;53!CL:0000084;6.93e-31;25!CL:0000236;8.32e-31;13!CL:0000945;8.65e-16;24!CL:0000623;2.21e-14;3!CL:0000226;4.13e-13;3!CL:0000842;4.13e-13;3!CL:0000898;1.01e-12;3!CL:0000767;1.01e-12;3!CL:0002087;4.89e-10;104!CL:0000815;3.99e-09;2!CL:0000792;3.99e-09;2!CL:0002677;3.99e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.25e-54,52;CL:0000542,4.56e-53,53;CL:0000051,4.56e-53,53;CL:0000625,9.43e-47,11;CL:0000791,4.39e-44,18;CL:0000789,4.39e-44,18;CL:0002420,4.39e-44,18;CL:0002419,4.39e-44,18;CL:0000790,4.39e-44,18;CL:0000084,7.99e-31,25;CL:0000827,7.99e-31,25;CL:0000236,1.64e-28,14;CL:0002087,1.88e-28,115;CL:0000738,1.96e-28,136;CL:0000037,1.44e-21,168;CL:0002031,2.69e-21,120;CL:0000988,4.40e-20,177;CL:0002032,3.26e-18,161;CL:0000837,3.26e-18,161;CL:0000945,8.17e-16,24;CL:0000826,8.17e-16,24;CL:0000623,2.12e-14,3;CL:0000825,2.12e-14,3;CL:0000226,2.95e-13,3;CL:0000842,2.95e-13,3;CL:0000767,8.74e-13,3;CL:0000898,1.55e-12,3;CL:0000815,5.35e-09,2;CL:0000792,5.35e-09,2;CL:0002677,5.35e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.58e-44;18!CL:0000051;6.78e-34;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.46e-21!15;UBERON:0000179!2.46e-21!15;UBERON:0000463!2.46e-21!15;UBERON:0002193!1.56e-07!112;UBERON:0004177!1.67e-07!7;UBERON:0002390!2.95e-07!102;UBERON:0003061!2.95e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.60e-38;15!UBERON:0000179;4.60e-38;15!UBERON:0000463;4.60e-38;15!UBERON:0002390;2.71e-18;32!UBERON:0002193;1.75e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.19e-38,15;UBERON:0000179,3.19e-38,15;UBERON:0000463,3.19e-38,15 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,2.68680578668049,1.54816123316076,0,0,0,0,0,0,2.76997704265939,0.802177789880567,0.651032612147555,0.223915474239924,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,6.00752472388345,5.33705552318133,2.56038133539904,3.60356388332411,4.02326707968138,0,2.86216126360609,3.41527781465669,2.34894875748376,1.52909291250092,0,0.560508562981536,0,0.196709770113833,0,0,0.167186495390678,2.28145586643513,0.946895611469467,0,0.334231370655521,1.17842362989935,1.55073726208535,0.541607727530031,0,0,0,0,0,0.14828656316206,0,0,0,1.14966148080576,2.40539211837841,1.01207876807801,5.09704662918555,11.0684187155591,11.4054245333805,1.80690142893327,5.75939750194883,8.74515085866421,7.57687206540854,6.56902397536837,6.65302252641617,4.01160293675261,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3980916937311,6.03757209606648,5.77543663258868,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,1.94142780736755,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,4.56702848308952,3.0585488285695,1.70894156152249,2.85878130549347,2.05681136543097,3.8908398671563,2.70015718619057,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,1.12780701575824,0.837952543656503,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0,0.202117188958219,0,0,1.14498490124799,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p4@FCRL3 | |short_description=p4@FCRL3 | ||
}} | }} |
Latest revision as of 19:24, 17 September 2015
Short description: | p4@FCRL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FCRL3_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -11bp_to_ENST00000368184, NM_052939, uc001fqx.3, uc001fqy.3, uc001fqz.3, uc001frb.2, uc009wsn.2, uc009wso.2_5end |
EntrezGene: | FCRL3 |
HGNC: | 18506 |
UniProt: | Q96P31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.25e-54 | 52 |
lymphocyte | 4.56e-53 | 53 |
common lymphoid progenitor | 4.56e-53 | 53 |
CD8-positive, alpha-beta T cell | 9.43e-47 | 11 |
mature alpha-beta T cell | 4.39e-44 | 18 |
alpha-beta T cell | 4.39e-44 | 18 |
immature T cell | 4.39e-44 | 18 |
mature T cell | 4.39e-44 | 18 |
immature alpha-beta T cell | 4.39e-44 | 18 |
T cell | 7.99e-31 | 25 |
pro-T cell | 7.99e-31 | 25 |
B cell | 1.64e-28 | 14 |
nongranular leukocyte | 1.88e-28 | 115 |
leukocyte | 1.96e-28 | 136 |
hematopoietic stem cell | 1.44e-21 | 168 |
hematopoietic lineage restricted progenitor cell | 2.69e-21 | 120 |
hematopoietic cell | 4.40e-20 | 177 |
hematopoietic oligopotent progenitor cell | 3.26e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.26e-18 | 161 |
lymphocyte of B lineage | 8.17e-16 | 24 |
pro-B cell | 8.17e-16 | 24 |
natural killer cell | 2.12e-14 | 3 |
pro-NK cell | 2.12e-14 | 3 |
single nucleate cell | 2.95e-13 | 3 |
mononuclear cell | 2.95e-13 | 3 |
basophil | 8.74e-13 | 3 |
naive T cell | 1.55e-12 | 3 |
regulatory T cell | 5.35e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.35e-09 | 2 |
naive regulatory T cell | 5.35e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.19e-38 | 15 |
haemolymphatic fluid | 3.19e-38 | 15 |
organism substance | 3.19e-38 | 15 |