FFCP PHASE1:Hg19::chr1:156470515..156470542,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4209 | |EntrezGene=4209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6997 | |HGNC=6997 | ||
|TSSclassifier=strong | |||
|UniProt=Q14814,Q4LE66 | |UniProt=Q14814,Q4LE66 | ||
|association_with_transcript=0bp_to_ENST00000340875,ENST00000353795,ENST00000368240,ENST00000464356,NM_005920,uc001fpc.2,uc001fpd.2,uc001fpe.1,uc009wsa.2_5end | |association_with_transcript=0bp_to_ENST00000340875,ENST00000353795,ENST00000368240,ENST00000464356,NM_005920,uc001fpc.2,uc001fpd.2,uc001fpe.1,uc009wsa.2_5end | ||
|cluster_id=chr1:156470515..156470542,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_MEF2D_5end | |description=CAGE_peak_2_at_MEF2D_5end | ||
|id=chr1:156470515..156470542,- | |id=chr1:156470515..156470542,- | ||
|ontology_enrichment_celltype=CL:0000037!1.24e-40!172;CL:0000566!1.24e-40!172;CL:0000738!8.68e-39!140;CL:0002032!7.99e-38!165;CL:0000837!7.99e-38!165;CL:0000988!4.50e-36!182;CL:0000763!8.33e-35!112;CL:0000049!8.33e-35!112;CL:0000766!7.27e-34!76;CL:0000557!2.49e-30!71;CL:0002087!4.52e-29!119;CL:0002031!4.84e-29!124;CL:0002009!8.59e-28!65;CL:0000839!1.46e-26!70;CL:0002194!1.66e-26!63;CL:0000576!1.66e-26!63;CL:0000040!1.66e-26!63;CL:0000559!1.66e-26!63;CL:0002057!1.82e-23!42;CL:0000860!6.25e-22!45;CL:0000094!6.44e-07!8 | |ontology_enrichment_celltype=CL:0000037!1.24e-40!172;CL:0000566!1.24e-40!172;CL:0000738!8.68e-39!140;CL:0002032!7.99e-38!165;CL:0000837!7.99e-38!165;CL:0000988!4.50e-36!182;CL:0000763!8.33e-35!112;CL:0000049!8.33e-35!112;CL:0000766!7.27e-34!76;CL:0000557!2.49e-30!71;CL:0002087!4.52e-29!119;CL:0002031!4.84e-29!124;CL:0002009!8.59e-28!65;CL:0000839!1.46e-26!70;CL:0002194!1.66e-26!63;CL:0000576!1.66e-26!63;CL:0000040!1.66e-26!63;CL:0000559!1.66e-26!63;CL:0002057!1.82e-23!42;CL:0000860!6.25e-22!45;CL:0000094!6.44e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.50e-17;33!CL:0002057;2.50e-17;33!CL:0000576;1.15e-16;48!CL:0000473;5.18e-16;39!CL:0000234;5.18e-16;39!CL:0000766;1.97e-15;69!CL:0000763;2.42e-11;100!CL:0000738;2.39e-09;136!CL:0002087;1.25e-08;104!CL:0000094;5.79e-07;8!CL:0000988;7.24e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.49e-41,168;CL:0000738,9.32e-40,136;CL:0002032,8.39e-39,161;CL:0000837,8.39e-39,161;CL:0000988,6.95e-37,177;CL:0000763,2.46e-36,108;CL:0000049,2.46e-36,108;CL:0000766,7.44e-36,72;CL:0000557,3.03e-32,67;CL:0002087,5.17e-30,115;CL:0002031,6.11e-30,120;CL:0002009,1.03e-29,61;CL:0002194,2.12e-28,59;CL:0000576,2.12e-28,59;CL:0000040,2.12e-28,59;CL:0000559,2.12e-28,59;CL:0000839,2.87e-28,66;CL:0000473,4.37e-25,48;CL:0000234,4.37e-25,48;CL:0000860,1.62e-23,42;CL:0002057,1.62e-23,42;CL:0000094,6.26e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.72e-17;42!CL:0000049;1.10e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.40e-30!102;UBERON:0003061!6.40e-30!102;UBERON:0002193!7.97e-30!112;UBERON:0002371!3.48e-25!80;UBERON:0007023!1.15e-24!115;UBERON:0001474!7.27e-23!86;UBERON:0002405!2.93e-19!115;UBERON:0004765!3.09e-18!101;UBERON:0001434!3.09e-18!101;UBERON:0003081!1.60e-16!216;UBERON:0002204!5.20e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.29e-31,98;UBERON:0003061,3.29e-31,98;UBERON:0002193,6.70e-31,108;UBERON:0002405,4.25e-27,93;UBERON:0002371,1.19e-26,76;UBERON:0007023,2.07e-24,114;UBERON:0001474,4.31e-24,82;UBERON:0004765,7.76e-20,90;UBERON:0003081,1.06e-18,203;UBERON:0001434,3.13e-17,100;UBERON:0002204,2.21e-07,167 | |||
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| ||
|short_description=p2@MEF2D | |short_description=p2@MEF2D | ||
}} | }} |
Latest revision as of 16:10, 17 September 2015
Short description: | p2@MEF2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MEF2D_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000340875, ENST00000353795, ENST00000368240, ENST00000464356, NM_005920, uc001fpc.2, uc001fpd.2, uc001fpe.1, uc009wsa.2_5end |
EntrezGene: | MEF2D |
HGNC: | 6997 |
UniProt: | Q14814Q4LE66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.49e-41 | 168 |
leukocyte | 9.32e-40 | 136 |
hematopoietic oligopotent progenitor cell | 8.39e-39 | 161 |
hematopoietic multipotent progenitor cell | 8.39e-39 | 161 |
hematopoietic cell | 6.95e-37 | 177 |
myeloid cell | 2.46e-36 | 108 |
common myeloid progenitor | 2.46e-36 | 108 |
myeloid leukocyte | 7.44e-36 | 72 |
granulocyte monocyte progenitor cell | 3.03e-32 | 67 |
nongranular leukocyte | 5.17e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 6.11e-30 | 120 |
macrophage dendritic cell progenitor | 1.03e-29 | 61 |
monopoietic cell | 2.12e-28 | 59 |
monocyte | 2.12e-28 | 59 |
monoblast | 2.12e-28 | 59 |
promonocyte | 2.12e-28 | 59 |
myeloid lineage restricted progenitor cell | 2.87e-28 | 66 |
defensive cell | 4.37e-25 | 48 |
phagocyte | 4.37e-25 | 48 |
classical monocyte | 1.62e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-23 | 42 |
granulocyte | 6.26e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.29e-31 | 98 |
blood island | 3.29e-31 | 98 |
hemolymphoid system | 6.70e-31 | 108 |
immune system | 4.25e-27 | 93 |
bone marrow | 1.19e-26 | 76 |
adult organism | 2.07e-24 | 114 |
bone element | 4.31e-24 | 82 |
skeletal element | 7.76e-20 | 90 |
lateral plate mesoderm | 1.06e-18 | 203 |
skeletal system | 3.13e-17 | 100 |
musculoskeletal system | 2.21e-07 | 167 |