FFCP PHASE1:Hg19::chr15:32933866..32933963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6447 | |EntrezGene=6447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10816 | |HGNC=10816 | ||
|TSSclassifier=strong | |||
|UniProt=P05408,C9J650,C9JNY7,Q6FHD0 | |UniProt=P05408,C9J650,C9JNY7,Q6FHD0 | ||
|association_with_transcript=0bp_to_ENST00000300175,ENST00000413748,ENST00000494364,ENST00000497208,NM_001144757,NM_003020,uc001zgz.2,uc001zha.2_5end | |association_with_transcript=0bp_to_ENST00000300175,ENST00000413748,ENST00000494364,ENST00000497208,NM_001144757,NM_003020,uc001zgz.2,uc001zha.2_5end | ||
|cluster_id=chr15:32933866..32933963,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SCG5_5end | |description=CAGE_peak_1_at_SCG5_5end | ||
|id=chr15:32933866..32933963,+ | |id=chr15:32933866..32933963,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.55e-14!180;CL:0000393!3.20e-13!60;CL:0000211!3.20e-13!60;CL:0000183!4.08e-12!59;CL:0000187!7.44e-11!54;CL:0000680!2.28e-10!57;CL:0000056!2.28e-10!57;CL:0000355!2.28e-10!57;CL:0000192!1.32e-08!42;CL:0000514!1.32e-08!42 | |ontology_enrichment_celltype=CL:0000055!1.55e-14!180;CL:0000393!3.20e-13!60;CL:0000211!3.20e-13!60;CL:0000183!4.08e-12!59;CL:0000187!7.44e-11!54;CL:0000680!2.28e-10!57;CL:0000056!2.28e-10!57;CL:0000355!2.28e-10!57;CL:0000192!1.32e-08!42;CL:0000514!1.32e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000393;1.03e-07;61!CL:0000211;1.03e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.45e-14,61;CL:0000211,4.45e-14,61;CL:0000187,1.64e-11,55;CL:0000680,2.08e-10,58;CL:0000056,2.08e-10,58;CL:0000355,2.08e-10,58;CL:0000192,5.84e-09,43;CL:0000514,5.84e-09,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.41e-37!86;UBERON:0003075!3.95e-36!86;UBERON:0007284!3.95e-36!86;UBERON:0001017!5.80e-35!82;UBERON:0001049!8.62e-35!57;UBERON:0005068!8.62e-35!57;UBERON:0006241!8.62e-35!57;UBERON:0007135!8.62e-35!57;UBERON:0002616!1.30e-34!59;UBERON:0002346!6.13e-33!90;UBERON:0000073!7.60e-33!94;UBERON:0001016!7.60e-33!94;UBERON:0003056!8.23e-30!61;UBERON:0000955!1.29e-28!69;UBERON:0006238!1.29e-28!69;UBERON:0000119!3.07e-28!312;UBERON:0000483!6.03e-28!309;UBERON:0002780!1.34e-27!41;UBERON:0001890!1.34e-27!41;UBERON:0006240!1.34e-27!41;UBERON:0003080!2.84e-27!42;UBERON:0000033!3.74e-25!123;UBERON:0000475!2.53e-24!365;UBERON:0000153!3.95e-24!129;UBERON:0007811!3.95e-24!129;UBERON:0004121!6.50e-23!169;UBERON:0001893!9.59e-23!34;UBERON:0002020!1.41e-22!34;UBERON:0003528!1.41e-22!34;UBERON:0002791!5.13e-22!33;UBERON:0000025!5.63e-22!194;UBERON:0001869!1.40e-21!32;UBERON:0000481!1.76e-21!347;UBERON:0000924!1.98e-21!173;UBERON:0006601!1.98e-21!173;UBERON:0000477!5.12e-18!286;UBERON:0004111!1.94e-17!241;UBERON:0000956!5.34e-17!25;UBERON:0000203!5.34e-17!25;UBERON:0002619!2.85e-16!22;UBERON:0001950!3.97e-15!20;UBERON:0007023!1.16e-13!115;UBERON:0000064!5.42e-13!219;UBERON:0000922!1.44e-11!612;UBERON:0000468!3.02e-11!659;UBERON:0001134!1.45e-09!61;UBERON:0002036!1.45e-09!61;UBERON:0003082!1.45e-09!61;UBERON:0000914!1.54e-09!83;UBERON:0002329!1.54e-09!83;UBERON:0003077!1.54e-09!83;UBERON:0003059!1.54e-09!83;UBERON:0007282!1.54e-09!83;UBERON:0009618!1.54e-09!83;UBERON:0007285!1.54e-09!83;UBERON:0002050!1.55e-09!605;UBERON:0005423!1.55e-09!605;UBERON:0002385!1.62e-09!63;UBERON:0001015!1.62e-09!63;UBERON:0000383!1.62e-09!63;UBERON:0000923!2.74e-09!604;UBERON:0005291!2.74e-09!604;UBERON:0006598!2.74e-09!604;UBERON:0002532!2.74e-09!604;UBERON:0003076!1.28e-08!15;UBERON:0003057!1.28e-08!15;UBERON:0000467!1.88e-08!625;UBERON:0004290!2.75e-08!70;UBERON:0000480!2.82e-08!626;UBERON:0000486!4.11e-08!82;UBERON:0005256!1.52e-07!143;UBERON:0004732!1.53e-07!13;UBERON:0002420!4.14e-07!9;UBERON:0007245!4.14e-07!9;UBERON:0010009!4.14e-07!9;UBERON:0010011!4.14e-07!9;UBERON:0000454!4.14e-07!9;UBERON:0002308!4.99e-07!9;UBERON:0000125!4.99e-07!9;UBERON:0004733!5.30e-07!12;UBERON:0002028!5.30e-07!12;UBERON:0007277!5.30e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.32e-21;41!UBERON:0001890;1.32e-21;41!UBERON:0001869;2.13e-21;32!UBERON:0001893;2.31e-21;34!UBERON:0002791;2.91e-21;32!UBERON:0003528;3.04e-21;34!UBERON:0002020;3.04e-21;34!UBERON:0000073;1.07e-20;53!UBERON:0002616;1.07e-20;53!UBERON:0000956;1.77e-18;25!UBERON:0000203;1.77e-18;25!UBERON:0002619;1.14e-17;22!UBERON:0001950;2.04e-16;20!UBERON:0001017;5.35e-15;75!UBERON:0000955;8.13e-15;68!UBERON:0001016;8.44e-12;83!UBERON:0004732;4.36e-08;13!UBERON:0002420;1.21e-07;9!UBERON:0007245;1.21e-07;9!UBERON:0010009;1.21e-07;9!UBERON:0010011;1.21e-07;9!UBERON:0000454;1.21e-07;9!UBERON:0000125;1.48e-07;9!UBERON:0002308;1.48e-07;9!UBERON:0004733;1.68e-07;12!UBERON:0002028;1.68e-07;12 | |||
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| ||
|short_description=p1@SCG5 | |short_description=p1@SCG5 | ||
}} | }} |
Latest revision as of 04:12, 17 September 2015
Short description: | p1@SCG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCG5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000300175, ENST00000413748, ENST00000494364, ENST00000497208, NM_001144757, NM_003020, uc001zgz.2, uc001zha.2_5end |
EntrezGene: | SCG5 |
HGNC: | 10816 |
UniProt: | P05408C9J650C9JNY7Q6FHD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.45e-14 | 61 |
electrically active cell | 4.45e-14 | 61 |
muscle cell | 1.64e-11 | 55 |
muscle precursor cell | 2.08e-10 | 58 |
myoblast | 2.08e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.08e-10 | 58 |
smooth muscle cell | 5.84e-09 | 43 |
smooth muscle myoblast | 5.84e-09 | 43 |