FFCP PHASE1:Hg19::chr1:156024552..156024657,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28956 | |EntrezGene=28956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29796 | |HGNC=29796 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000368302,ENST00000368304,ENST00000489664_5end | |association_with_transcript=0bp_to_ENST00000368302,ENST00000368304,ENST00000489664_5end | ||
|cluster_id=chr1:156024552..156024657,+ | |||
|description=CAGE_peak_1_at_LAMTOR2_5end | |description=CAGE_peak_1_at_LAMTOR2_5end | ||
|id=chr1:156024552..156024657,+ | |id=chr1:156024552..156024657,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.53e-12!254;CL:0000220!3.91e-10!246;CL:0002321!5.37e-10!248;CL:0000548!6.33e-09!679;CL:0000004!6.33e-09!679;CL:0000255!6.33e-09!679;CL:0000222!6.45e-09!119;CL:0000012!2.73e-08!682;CL:0002078!4.48e-07!44;CL:1000449!5.67e-07!16 | |ontology_enrichment_celltype=CL:0000066!3.53e-12!254;CL:0000220!3.91e-10!246;CL:0002321!5.37e-10!248;CL:0000548!6.33e-09!679;CL:0000004!6.33e-09!679;CL:0000255!6.33e-09!679;CL:0000222!6.45e-09!119;CL:0000012!2.73e-08!682;CL:0002078!4.48e-07!44;CL:1000449!5.67e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000449;5.20e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.57e-12,253;CL:0002321,2.13e-10,250;CL:0000222,2.33e-09,121;CL:0002078,1.71e-07,45;CL:1000449,5.69e-07,15;CL:0000115,5.79e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.86e-07!118;UBERON:0004211!5.67e-07!16;UBERON:0001285!5.67e-07!16;UBERON:0007684!5.67e-07!16;UBERON:0003220!5.67e-07!16;UBERON:0004208!5.67e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.20e-07;15!UBERON:0004819;5.20e-07;15!UBERON:0001285;5.20e-07;15!UBERON:0007684;5.20e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.55e-07,117;UBERON:0004211,5.69e-07,15;UBERON:0009773,5.69e-07,15;UBERON:0001231,5.69e-07,15;UBERON:0001285,5.69e-07,15;UBERON:0007684,5.69e-07,15;UBERON:0004208,5.69e-07,15 | |||
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|short_description=p1@LAMTOR2 | |short_description=p1@LAMTOR2 | ||
}} | }} |
Latest revision as of 14:29, 17 September 2015
Short description: | p1@LAMTOR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LAMTOR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368302, ENST00000368304, ENST00000489664_5end |
EntrezGene: | LAMTOR2 |
HGNC: | 29796 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.57e-12 | 253 |
embryonic cell | 2.13e-10 | 250 |
mesodermal cell | 2.33e-09 | 121 |
meso-epithelial cell | 1.71e-07 | 45 |
epithelial cell of nephron | 5.69e-07 | 15 |
endothelial cell | 5.79e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.55e-07 | 117 |
nephron epithelium | 5.69e-07 | 15 |
renal tubule | 5.69e-07 | 15 |
nephron tubule | 5.69e-07 | 15 |
nephron | 5.69e-07 | 15 |
uriniferous tubule | 5.69e-07 | 15 |
nephrogenic mesenchyme | 5.69e-07 | 15 |