FFCP PHASE1:Hg19::chr15:101459519..101459585,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79705 | |EntrezGene=79705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18608 | |HGNC=18608 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLF8 | |UniProt=E9PLF8 | ||
|association_with_transcript=0bp_to_ENST00000527698,ENST00000532029,ENST00000534045_5end | |association_with_transcript=0bp_to_ENST00000527698,ENST00000532029,ENST00000534045_5end | ||
|cluster_id=chr15:101459519..101459585,+ | |||
|description=CAGE_peak_1_at_LRRK1_5end | |description=CAGE_peak_1_at_LRRK1_5end | ||
|id=chr15:101459519..101459585,+ | |id=chr15:101459519..101459585,+ | ||
|ontology_enrichment_celltype=CL:0000766!5.99e-26!76;CL:0000557!1.55e-24!71;CL:0002009!1.20e-23!65;CL:0000763!2.66e-23!112;CL:0000049!2.66e-23!112;CL:0002194!2.15e-22!63;CL:0000576!2.15e-22!63;CL:0000040!2.15e-22!63;CL:0000559!2.15e-22!63;CL:0000839!1.44e-20!70;CL:0000738!1.76e-17!140;CL:0000860!2.63e-16!45;CL:0002057!6.10e-16!42;CL:0000037!7.21e-16!172;CL:0000566!7.21e-16!172;CL:0002032!1.21e-14!165;CL:0000837!1.21e-14!165;CL:0000134!1.26e-14!358;CL:0002320!1.37e-14!365;CL:0000988!4.89e-14!182;CL:0000048!4.98e-12!430;CL:0002087!1.09e-11!119;CL:0000723!1.46e-11!436;CL:0002031!5.49e-11!124;CL:0000219!6.43e-11!390;CL:0000034!2.05e-10!444;CL:0000451!8.50e-09!10;CL:0000945!1.97e-08!24;CL:0000826!1.97e-08!24;CL:0002371!2.43e-08!591;CL:0000990!1.85e-07!8 | |ontology_enrichment_celltype=CL:0000766!5.99e-26!76;CL:0000557!1.55e-24!71;CL:0002009!1.20e-23!65;CL:0000763!2.66e-23!112;CL:0000049!2.66e-23!112;CL:0002194!2.15e-22!63;CL:0000576!2.15e-22!63;CL:0000040!2.15e-22!63;CL:0000559!2.15e-22!63;CL:0000839!1.44e-20!70;CL:0000738!1.76e-17!140;CL:0000860!2.63e-16!45;CL:0002057!6.10e-16!42;CL:0000037!7.21e-16!172;CL:0000566!7.21e-16!172;CL:0002032!1.21e-14!165;CL:0000837!1.21e-14!165;CL:0000134!1.26e-14!358;CL:0002320!1.37e-14!365;CL:0000988!4.89e-14!182;CL:0000048!4.98e-12!430;CL:0002087!1.09e-11!119;CL:0000723!1.46e-11!436;CL:0002031!5.49e-11!124;CL:0000219!6.43e-11!390;CL:0000034!2.05e-10!444;CL:0000451!8.50e-09!10;CL:0000945!1.97e-08!24;CL:0000826!1.97e-08!24;CL:0002371!2.43e-08!591;CL:0000990!1.85e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000576;5.11e-12;48!CL:0000766;1.96e-11;69!CL:0000473;4.63e-11;39!CL:0000234;4.63e-11;39!CL:0000860;1.98e-10;33!CL:0002057;1.98e-10;33!CL:0000451;5.00e-09;10!CL:0000945;6.19e-08;24!CL:0000763;1.07e-07;100!CL:0000990;1.21e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.96e-26,72;CL:0000557,7.83e-25,67;CL:0000763,1.72e-24,108;CL:0000049,1.72e-24,108;CL:0002009,4.48e-24,61;CL:0002194,8.73e-23,59;CL:0000576,8.73e-23,59;CL:0000040,8.73e-23,59;CL:0000559,8.73e-23,59;CL:0000839,5.85e-21,66;CL:0000738,1.37e-18,136;CL:0000473,1.56e-18,48;CL:0000234,1.56e-18,48;CL:0000037,1.37e-17,168;CL:0002032,3.12e-16,161;CL:0000837,3.12e-16,161;CL:0000860,3.39e-16,42;CL:0002057,3.39e-16,42;CL:0000988,1.13e-15,177;CL:0000134,2.29e-15,354;CL:0002320,3.74e-15,361;CL:0002087,1.57e-12,115;CL:0000048,3.61e-12,427;CL:0002031,7.49e-12,120;CL:0000723,1.15e-11,433;CL:0000219,1.64e-11,386;CL:0000034,1.65e-10,441;CL:0000451,6.33e-09,10;CL:0000945,2.50e-08,24;CL:0000826,2.50e-08,24;CL:0000990,1.45e-07,8;CL:0002393,9.41e-07,9;CL:0002397,9.41e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-12;42!CL:0000049;6.87e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.11e-22!80;UBERON:0002193!1.82e-20!112;UBERON:0001474!3.42e-20!86;UBERON:0002390!1.62e-19!102;UBERON:0003061!1.62e-19!102;UBERON:0004765!1.67e-18!101;UBERON:0001434!1.67e-18!101;UBERON:0002405!4.57e-16!115;UBERON:0003081!4.54e-15!216;UBERON:0002204!1.07e-14!167;UBERON:0002384!1.44e-13!375;UBERON:0000926!2.14e-07!448;UBERON:0004120!2.14e-07!448;UBERON:0006603!2.14e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!1.11e-22!80;UBERON:0002193!1.82e-20!112;UBERON:0001474!3.42e-20!86;UBERON:0002390!1.62e-19!102;UBERON:0003061!1.62e-19!102;UBERON:0004765!1.67e-18!101;UBERON:0001434!1.67e-18!101;UBERON:0002405!4.57e-16!115;UBERON:0003081!4.54e-15!216;UBERON:0002204!1.07e-14!167;UBERON:0002384!1.44e-13!375;UBERON:0000926!2.14e-07!448;UBERON:0004120!2.14e-07!448;UBERON:0006603!2.14e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.47e-23,76;UBERON:0002405,1.48e-22,93;UBERON:0002193,7.21e-21,108;UBERON:0001474,2.21e-20,82;UBERON:0002390,4.72e-20,98;UBERON:0003061,4.72e-20,98;UBERON:0004765,1.69e-18,90;UBERON:0001434,2.32e-18,100;UBERON:0003081,1.02e-14,203;UBERON:0002384,3.51e-14,371;UBERON:0002204,1.19e-13,167;UBERON:0000926,1.61e-09,315;UBERON:0004120,1.61e-09,315;UBERON:0006603,1.61e-09,315 | |||
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| ||
|short_description=p1@LRRK1 | |short_description=p1@LRRK1 | ||
}} | }} |
Latest revision as of 22:23, 16 September 2015
Short description: | p1@LRRK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000527698, ENST00000532029, ENST00000534045_5end |
EntrezGene: | LRRK1 |
HGNC: | 18608 |
UniProt: | E9PLF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.47e-23 | 76 |
immune system | 1.48e-22 | 93 |
hemolymphoid system | 7.21e-21 | 108 |
bone element | 2.21e-20 | 82 |
hematopoietic system | 4.72e-20 | 98 |
blood island | 4.72e-20 | 98 |
skeletal element | 1.69e-18 | 90 |
skeletal system | 2.32e-18 | 100 |
lateral plate mesoderm | 1.02e-14 | 203 |
connective tissue | 3.51e-14 | 371 |
musculoskeletal system | 1.19e-13 | 167 |
mesoderm | 1.61e-09 | 315 |
mesoderm-derived structure | 1.61e-09 | 315 |
presumptive mesoderm | 1.61e-09 | 315 |