FFCP PHASE1:Hg19::chr14:99738521..99738551,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:99738521..99738551,- | |||
|coexpression_cluster_id=C588 | |||
|description=CAGE_peak_at_chr14:99738521..99738551,- | |description=CAGE_peak_at_chr14:99738521..99738551,- | ||
|id=chr14:99738521..99738551,- | |id=chr14:99738521..99738551,- | ||
|ontology_enrichment_celltype=CL:0000084!1.13e-15!25;CL:0000827!1.13e-15!25;CL:0000791!4.69e-13!18;CL:0000789!4.69e-13!18;CL:0002420!4.69e-13!18;CL:0002419!4.69e-13!18;CL:0000790!4.69e-13!18;CL:0000738!7.79e-10!140;CL:0000838!4.32e-09!52;CL:0000542!1.49e-08!53;CL:0000051!1.49e-08!53;CL:0000625!1.72e-08!11;CL:0002087!9.46e-08!119 | |ontology_enrichment_celltype=CL:0000084!1.13e-15!25;CL:0000827!1.13e-15!25;CL:0000791!4.69e-13!18;CL:0000789!4.69e-13!18;CL:0002420!4.69e-13!18;CL:0002419!4.69e-13!18;CL:0000790!4.69e-13!18;CL:0000738!7.79e-10!140;CL:0000838!4.32e-09!52;CL:0000542!1.49e-08!53;CL:0000051!1.49e-08!53;CL:0000625!1.72e-08!11;CL:0002087!9.46e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000084;7.58e-18;25!CL:0000791;7.22e-15;18!CL:0000789;7.22e-15;18!CL:0002419;7.22e-15;18!CL:0000625;1.39e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.83e-18,25;CL:0000827,6.83e-18,25;CL:0000791,7.35e-15,18;CL:0000789,7.35e-15,18;CL:0002420,7.35e-15,18;CL:0002419,7.35e-15,18;CL:0000790,7.35e-15,18;CL:0000738,1.45e-10,136;CL:0000625,1.40e-09,11;CL:0000838,6.48e-09,52;CL:0002087,1.10e-08,115;CL:0000542,1.72e-08,53;CL:0000051,1.72e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;7.22e-15;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.61e-19!115;UBERON:0003080!1.44e-11!42;UBERON:0002780!1.86e-11!41;UBERON:0001890!1.86e-11!41;UBERON:0006240!1.86e-11!41;UBERON:0001893!3.04e-11!34;UBERON:0001869!3.29e-11!32;UBERON:0000073!4.17e-11!94;UBERON:0001016!4.17e-11!94;UBERON:0002020!5.11e-11!34;UBERON:0003528!5.11e-11!34;UBERON:0002791!6.56e-11!33;UBERON:0005743!7.86e-11!86;UBERON:0001017!1.15e-10!82;UBERON:0000924!1.48e-10!173;UBERON:0006601!1.48e-10!173;UBERON:0001049!2.21e-10!57;UBERON:0005068!2.21e-10!57;UBERON:0006241!2.21e-10!57;UBERON:0007135!2.21e-10!57;UBERON:0000153!1.14e-09!129;UBERON:0007811!1.14e-09!129;UBERON:0002619!1.80e-09!22;UBERON:0004121!3.06e-09!169;UBERON:0001950!1.23e-08!20;UBERON:0000956!3.56e-08!25;UBERON:0000203!3.56e-08!25;UBERON:0000955!6.68e-08!69;UBERON:0006238!6.68e-08!69;UBERON:0003056!8.26e-08!61;UBERON:0000033!9.14e-08!123;UBERON:0002346!1.25e-07!90;UBERON:0002616!1.40e-07!59;UBERON:0000178!1.59e-07!15;UBERON:0000179!1.59e-07!15;UBERON:0000463!1.59e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!3.61e-19!115;UBERON:0003080!1.44e-11!42;UBERON:0002780!1.86e-11!41;UBERON:0001890!1.86e-11!41;UBERON:0006240!1.86e-11!41;UBERON:0001893!3.04e-11!34;UBERON:0001869!3.29e-11!32;UBERON:0000073!4.17e-11!94;UBERON:0001016!4.17e-11!94;UBERON:0002020!5.11e-11!34;UBERON:0003528!5.11e-11!34;UBERON:0002791!6.56e-11!33;UBERON:0005743!7.86e-11!86;UBERON:0001017!1.15e-10!82;UBERON:0000924!1.48e-10!173;UBERON:0006601!1.48e-10!173;UBERON:0001049!2.21e-10!57;UBERON:0005068!2.21e-10!57;UBERON:0006241!2.21e-10!57;UBERON:0007135!2.21e-10!57;UBERON:0000153!1.14e-09!129;UBERON:0007811!1.14e-09!129;UBERON:0002619!1.80e-09!22;UBERON:0004121!3.06e-09!169;UBERON:0001950!1.23e-08!20;UBERON:0000956!3.56e-08!25;UBERON:0000203!3.56e-08!25;UBERON:0000955!6.68e-08!69;UBERON:0006238!6.68e-08!69;UBERON:0003056!8.26e-08!61;UBERON:0000033!9.14e-08!123;UBERON:0002346!1.25e-07!90;UBERON:0002616!1.40e-07!59;UBERON:0000178!1.59e-07!15;UBERON:0000179!1.59e-07!15;UBERON:0000463!1.59e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.60e-11;32!UBERON:0002791;5.18e-11;32!UBERON:0001893;7.95e-11;34!UBERON:0003528;9.30e-11;34!UBERON:0002020;9.30e-11;34!UBERON:0002619;9.33e-11;22!UBERON:0001950;8.86e-10;20!UBERON:0002780;2.00e-09;41!UBERON:0001890;2.00e-09;41!UBERON:0000956;4.56e-09;25!UBERON:0000203;4.56e-09;25!UBERON:0000178;8.61e-08;15!UBERON:0000179;8.61e-08;15!UBERON:0000463;8.61e-08;15 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.783556884599516,1.96587149201207,0,1.96597234917155,2.37390280405608,0,0,0,0,0,0,3.44738962615006,0.204000691244253,1.25381888591235,1.14494394852423,0.547497700291537,0,0.764134057479513,0.410502947249729,0.865818594450472,26.7487708257255,67.5539740651094,33.2854665129563,5.51652734687356,7.8313538882345,2.58827807116751,0.309868802321207,0,0.293600439334847,33.2397245119126,50.5372007624757,68.5754351462092,5.37397138175818,22.6725566213286,5.92423805558629,2.61716829803216,4.1566353805769,1.94067248950253,1.16214518452842,5.34518254428373,1.23882548358041,2.01384674625505,3.84241059793651,1.41889337933151,3.7922024881028,8.39130088658974,0,2.82363509313907,4.36649840092553,1.12361742222542,3.06083892370903,3.53021929783703,1.27867425159808,2.63881040149373,3.78980949481101,1.70489900213078,3.19230162491442,2.8369261234557,0.622822248995575,3.51748131359441,3.12889751052121,1.08594422352558,11.502590550034,5.89244217580104,1.26584954976354,0.211255286311942,0.425208599930087,0,0.22465726229299,0,0,0,0.19891667719909,0,0,1.09227722252426,1.77901850772711,0.853460445133014,1.20118796110804,0,0.661044872784862,0,1.70763890732835,4.11066032559657,0.382273228125229,0,22.980851082243,0,567.704396548522,412.268290123874,412.231005494016,154.480321740987,277.359848905185,233.883216032958,305.877963600421,144.2765416663,206.813347047336,208.906462592355,237.494988521919,178.431208377865,163.484599882767,131.550323682941,119.106857665701,181.416731670143,549.10514338911,603.304567342303,550.902210452228,151.154663158553,251.39264380286,222.670584672744,261.622361548166,186.679332793921,150.400277840833,149.220970978395,148.165917172528,162.159036332648,197.390547952706,180.661043309585,140.412887473499,298.781193459053,228.126487003332,328.606572410071,0,0,0,0,0,0,0,0,0.756278537312543,0.221729397462564,1.66886092816939,7.66227591661619,16.3932879731644,22.6178510098502,3.57002133020152,6.44280028007289,3.32394901297163,1.19245312152671,2.85997455390064,1.48583000531826,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,1.62028389576352,0.17859945656816,0.22452937262617,0,0,0,0.366403487860815,9.22462922052443,31.022421131866,24.4212669199819,0,0.12663051166458,0.132409180813219,0,4.61068896857864,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,1.52664848236894,4.69431538667581,3.79217178096071,0,0.122834317311768,0,1.18800285728205,0.247266929278557,0,0.718618141816238,0.841680569770331,1.25118519871964,0,0.438977620880838,0.30648779579902,0.45071417671979,0.226864366320042,1.25572744982203,0.85422955527427,0,0.600182192168805,0.412210116953756,0.257640540045629,0,1.35021065793013,0.68205903612839,0.504867548488229,0.368199594569197,0.161646056818812,0.355009592516614,0.503760491138201,0.67824236924195,11.2091294834712,10.6370987030426,9.75135624322613,1.82960559194393,2.25300606146525,2.44007280025989,2.90250954043037,2.27088765788066,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,1.77236972004421,209.694972221959,0,0,36.8760958972982,5.62008766288098,31.3650393924288,22.7767575089983,0,0,0,0.463721619900307,0.117408694235822,0,0,0,1.58040879591855,5.15091697256924,0.492434012174795,0,0.594524649154913,3.74935335947108,7.22323151255096,7.93940544557364,1.52249488594842,2.90633938513962,7.66765358330422,0,0,0.621984346622316,2.16179930125442,0.12624243342638,0.126995788584338,0,0,10.2643467613623,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3996218765488,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,41.5835884215986,194.2723295591,180.049025007697,192.129525310783,8.38512259934129,62.4671298516584,31.7048413238855,48.2446844162924,25.5175500661265,6.74106321552464,5.9832291840805,16.1622050240054,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,2.0694614258501,0,0.368738337083406,0.0868836144680828,0,0,206.561258096765,182.49421389255,196.698889031748,1.5156378572313,1.66435439510497,3.93107381328584,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0,0,0.308419387605311,0.532685175939381,0.164254312027618,0,0.116210378459959,0.120859449591622,9.2232976339511,15.1933631744229,0,0,0.131124414959424,0.451199612907412,0.616122696835318,0,0,0.633309773357254,0,0,1.29549549661284,0,0,1.00337954770971,0.509752546090077,0,0.447749509444357,0,0,1.79515087581472,0.984043937099117,1.62689197332152,2.06082023295445,0.366277859273374,0.495056999523528,19.5250282918699,22.7521086112782,0,0.193341436584244,0,0.15350367472613,0.827019434907183,0.322260734604821,0.435050081742686,1.44885266607372,0.623224249527161,5.61968712227326,3.65161127993702,13.1441093869422,8.49725359186619,0,0,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,4.64735247149625,0,0.143411352204052,0,0,0,1.47775344708365,0,0,0,7.60154690531545,8.04362730642945,3.2667295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| ||
|short_description=p@chr14:99738521..99738551,- | |short_description=p@chr14:99738521..99738551,- | ||
}} | }} |
Latest revision as of 00:13, 25 July 2015
Short description: | p@chr14:99738521..99738551, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:99738521..99738551, - |
Coexpression cluster: | C588_CD4_neuroectodermal_thymus_CD8_neuroepithelioma_Hodgkin_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.83e-18 | 25 |
pro-T cell | 6.83e-18 | 25 |
mature alpha-beta T cell | 7.35e-15 | 18 |
alpha-beta T cell | 7.35e-15 | 18 |
immature T cell | 7.35e-15 | 18 |
mature T cell | 7.35e-15 | 18 |
immature alpha-beta T cell | 7.35e-15 | 18 |
leukocyte | 1.45e-10 | 136 |
CD8-positive, alpha-beta T cell | 1.40e-09 | 11 |
lymphoid lineage restricted progenitor cell | 6.48e-09 | 52 |
nongranular leukocyte | 1.10e-08 | 115 |
lymphocyte | 1.72e-08 | 53 |
common lymphoid progenitor | 1.72e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.29e-18 | 114 |
telencephalon | 1.63e-12 | 34 |
cerebral hemisphere | 1.81e-12 | 32 |
brain grey matter | 2.95e-12 | 34 |
gray matter | 2.95e-12 | 34 |
regional part of forebrain | 4.62e-12 | 41 |
forebrain | 4.62e-12 | 41 |
anterior neural tube | 4.62e-12 | 41 |
future forebrain | 4.62e-12 | 41 |
regional part of telencephalon | 5.53e-12 | 32 |
central nervous system | 3.13e-11 | 81 |
nervous system | 7.68e-11 | 89 |
regional part of cerebral cortex | 1.03e-10 | 22 |
neural tube | 1.36e-10 | 56 |
neural rod | 1.36e-10 | 56 |
future spinal cord | 1.36e-10 | 56 |
neural keel | 1.36e-10 | 56 |
regional part of nervous system | 2.78e-10 | 53 |
regional part of brain | 2.78e-10 | 53 |
ectoderm-derived structure | 5.17e-10 | 171 |
ectoderm | 5.17e-10 | 171 |
presumptive ectoderm | 5.17e-10 | 171 |
neocortex | 9.52e-10 | 20 |
cerebral cortex | 5.61e-09 | 25 |
pallium | 5.61e-09 | 25 |
brain | 4.10e-08 | 68 |
future brain | 4.10e-08 | 68 |
pre-chordal neural plate | 7.29e-08 | 61 |
blood | 8.50e-08 | 15 |
haemolymphatic fluid | 8.50e-08 | 15 |
organism substance | 8.50e-08 | 15 |
neurectoderm | 1.01e-07 | 86 |
ecto-epithelium | 1.15e-07 | 104 |
organ system subdivision | 1.72e-07 | 223 |