FFCP PHASE1:Hg19::chr1:153521571..153521587,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6274 | |EntrezGene=6274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10493 | |HGNC=10493 | ||
|TSSclassifier=strong | |||
|UniProt=P33764 | |UniProt=P33764 | ||
|association_with_transcript=14bp_to_ENST00000368712_5end | |association_with_transcript=14bp_to_ENST00000368712_5end | ||
|cluster_id=chr1:153521571..153521587,- | |||
|description=CAGE_peak_3_at_S100A3_5end | |description=CAGE_peak_3_at_S100A3_5end | ||
|id=chr1:153521571..153521587,- | |id=chr1:153521571..153521587,- | ||
|ontology_enrichment_celltype=CL:0000055!5.45e-19!180;CL:0000057!8.28e-17!75;CL:0002371!7.76e-16!591;CL:0000048!1.29e-15!430;CL:0000723!2.41e-15!436;CL:0000144!5.57e-15!625;CL:0000034!3.11e-14!444;CL:0000548!5.02e-13!679;CL:0000004!5.02e-13!679;CL:0000255!5.02e-13!679;CL:0000012!1.10e-12!682;CL:0002320!2.52e-12!365;CL:0000134!2.64e-10!358;CL:0000219!3.91e-09!390;CL:0002570!5.42e-09!8;CL:0000003!8.16e-09!722;CL:0002620!1.51e-08!23 | |ontology_enrichment_celltype=CL:0000055!5.45e-19!180;CL:0000057!8.28e-17!75;CL:0002371!7.76e-16!591;CL:0000048!1.29e-15!430;CL:0000723!2.41e-15!436;CL:0000144!5.57e-15!625;CL:0000034!3.11e-14!444;CL:0000548!5.02e-13!679;CL:0000004!5.02e-13!679;CL:0000255!5.02e-13!679;CL:0000012!1.10e-12!682;CL:0002320!2.52e-12!365;CL:0000134!2.64e-10!358;CL:0000219!3.91e-09!390;CL:0002570!5.42e-09!8;CL:0000003!8.16e-09!722;CL:0002620!1.51e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002570;1.34e-18;8!CL:0002582;9.83e-10;3!CL:0000515;1.41e-09;3!CL:0002334;1.07e-08;12!CL:0002583;1.35e-07;2!CL:0000134;1.43e-07;55!CL:0000723;1.46e-07;61!CL:0000048;1.48e-07;58!CL:0002602;1.98e-07;2!CL:0000056;2.80e-07;4!CL:0002600;4.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,2.54e-18,8;CL:0002582,1.05e-09,3;CL:0002334,1.56e-08,12;CL:0000723,8.10e-08,433;CL:0002602,1.40e-07,2;CL:0000048,1.56e-07,427;CL:0002583,1.65e-07,2;CL:0000034,1.86e-07,441;CL:0002600,2.63e-07,2;CL:0000515,3.58e-07,4;CL:0002598,4.59e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000515;2.80e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.42e-13!375;UBERON:0000914!1.25e-11!83;UBERON:0002329!1.25e-11!83;UBERON:0003077!1.25e-11!83;UBERON:0003059!1.25e-11!83;UBERON:0007282!1.25e-11!83;UBERON:0009618!1.25e-11!83;UBERON:0007285!1.25e-11!83;UBERON:0004290!1.12e-09!70;UBERON:0000486!1.41e-09!82;UBERON:0005256!6.27e-07!143;UBERON:0002204!6.67e-07!167;UBERON:0003102!8.94e-07!95;UBERON:0002199!9.47e-07!45;UBERON:0002416!9.47e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.54e-13;14!UBERON:0002067;3.09e-08;9!UBERON:0006444;1.98e-07;2!UBERON:0001995;1.98e-07;2!UBERON:0004715;1.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.87e-13,14;UBERON:0002067,4.07e-08,9;UBERON:0004016,4.07e-08,9;UBERON:0010083,4.07e-08,9;UBERON:0006444,1.40e-07,2;UBERON:0001995,1.40e-07,2;UBERON:0004715,1.40e-07,2;UBERON:0002199,5.63e-07,46;UBERON:0002416,5.63e-07,46;UBERON:0002329,6.21e-07,71;UBERON:0003059,6.21e-07,71;UBERON:0007282,6.21e-07,71;UBERON:0004290,6.21e-07,71;UBERON:0009618,6.21e-07,71;UBERON:0003077,8.65e-07,72;UBERON:0007285,8.65e-07,72;UBERON:0002384,8.89e-07,371 | |||
|phase1_expression=0,1.07050261945492,0,0,0,0,0,3.15859936713415,0,0,0,0,0,2.84662611808107,2.65117900582333,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0.232429036905685,0.822335776043652,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0.797854630486527,1.70489900213078,0,0.56738522469114,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,1.09288586487763,0.370784442784429,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0,0.573673241497627,1.06400514659507,0.560677600142307,0,0,0,0.269421344139376,0.163461903113459,0,0,0.234321431833797,1.24864030732128,1.1409436430889,1.04614076386261,0.117434498643765,0.323745888736263,0.842704840213491,1.83738754129404,0.737005903870608,0.619954687054593,0,0.247266929278557,2.73048408581408,0.718618141816238,0.168336113954066,0,0.831192346452549,0,0.919463387397059,0.150238058906597,0,0,0.427114777637135,0.423863802319124,0,0.824420233907511,0.257640540045629,0.37223371266318,0.168776332241266,0.779496041289589,0.504867548488229,0.644349290496095,0,0,0.302256294682921,2.20428770003634,0.193260853163297,0.818238361772504,0.286804595389004,0,0,0,0,0,0,3.12899064659632,0,2.76269842704961,0.464367928031979,1.44375896333917,0.473227200159376,0,0,0.220587945464788,0.217879444092406,0,0.808987848960987,0.196221465125346,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,1.09750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0,10.7296933755565,5.071816515336,0.26593811658487,2.08014873822732,0.771622122786426,0,1.3321108950805,0,0,0,8.14340460734338,0,0,0.301439377059586,0,0,0,0,0,0.718874566474748,0,0,2.46128221334885,1.02738161275192,1.43248770591916,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,2.00068208423871,0.271265023699736,0.623912584592421,0.535286966391485,0,1.40569697991256,0.601892199455438,0,0,0.664225598535437,0.184369168541703,1.91143951829782,1.56640925970192,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0.153461973288062,0.280660094433074,0.128139149255701,1.02341449813341,0,0,2.00472601943452,3.37367278094941,3.12083192852475,1.03850885836724,1.74315567689939,0.120859449591622,0,0,0.229628896329213,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0.219259876645935,0,0.512900250232778,0,0,0,0.54941678891006,0.247528499761764,0,0,0,0,2.31072925671967,0.921022048356777,0.689182862422653,0.751941714077915,0.580066775656914,0.511359764496605,0,0.330569830721956,0,0,0,0,0,0,0.616067160352178,1.06461206063404,0.869932992075073,0.18532421910392,0,0,0,0.190630193923825,1.79128453917934,1.71175595213568,0.636406495851874,0,0.539617372749944,0.823611089208164,1.06031162111118,0.404364963146632,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,2.31510213706675,1.9676842561399,0,0.6196469961995,0.281695602532241,0.143411352204052,0,0,0.709522128141196,0.422215270595328,0.658589785919804,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.593929361665277,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0.715880777515084,0.246169610922139,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,1.4655614944298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0.728341138602278,0,0,0,0.126373159256976,0,0,0,0,0,0,1.42304773014896,0.138674673013139,0,0.0979923974143777,0,0,0.859930162358083,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0.999048047910651,0,0,0,0,0,0,3.80531777006119,5.33474516192899,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,3.44496185301621,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.511164065356265,0.113312091520126,0,0,0.258565912723101,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,2.38807684618998,0.701139929541673,1.66441758450784,0.568209015825267,0.251567901752575,4.44905610798268,0.228840068396924,1.36107831386915,1.24349760466224,0.295710299979268,0.318593534327405,0,0.155262956876259,0.414706207840855,0,1.5652351854352,0,0,0.406870733204662,0,0.107410557042488,0,0.398095888698616,2.00013882331577,1.03018711554838,1.01024846629776,0,0.192619830407303,0,0,0.453411851024545,0,0,0,2.16161013012681,0,0.176689145945881,0,0.675769762612291,0.76872455576384,1.0362910251936,0,0,0,0,0,0,1.72041036127604,0,0,0,0,0,2.76158925377761,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.352675943690684,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,3.94422421706063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,2.79185747097888,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,1.07050261945492,0,0,0,0,0,3.15859936713415,0,0,0,0,0,2.84662611808107,2.65117900582333,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0.232429036905685,0.822335776043652,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0.797854630486527,1.70489900213078,0,0.56738522469114,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,1.09288586487763,0.370784442784429,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0,0.573673241497627,1.06400514659507,0.560677600142307,0,0,0,0.269421344139376,0.163461903113459,0,0,0.234321431833797,1.24864030732128,1.1409436430889,1.04614076386261,0.117434498643765,0.323745888736263,0.842704840213491,1.83738754129404,0.737005903870608,0.619954687054593,0,0.247266929278557,2.73048408581408,0.718618141816238,0.168336113954066,0,0.831192346452549,0,0.919463387397059,0.150238058906597,0,0,0.427114777637135,0.423863802319124,0,0.824420233907511,0.257640540045629,0.37223371266318,0.168776332241266,0.779496041289589,0.504867548488229,0.644349290496095,0,0,0.302256294682921,2.20428770003634,0.193260853163297,0.818238361772504,0.286804595389004,0,0,0,0,0,0,3.12899064659632,0,2.76269842704961,0.464367928031979,1.44375896333917,0.473227200159376,0,0,0.220587945464788,0.217879444092406,0,0.808987848960987,0.196221465125346,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,1.09750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0,10.7296933755565,5.071816515336,0.26593811658487,2.08014873822732,0.771622122786426,0,1.3321108950805,0,0,0,8.14340460734338,0,0,0.301439377059586,0,0,0,0,0,0.718874566474748,0,0,2.46128221334885,1.02738161275192,1.43248770591916,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,2.00068208423871,0.271265023699736,0.623912584592421,0.535286966391485,0,1.40569697991256,0.601892199455438,0,0,0.664225598535437,0.184369168541703,1.91143951829782,1.56640925970192,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0.153461973288062,0.280660094433074,0.128139149255701,1.02341449813341,0,0,2.00472601943452,3.37367278094941,3.12083192852475,1.03850885836724,1.74315567689939,0.120859449591622,0,0,0.229628896329213,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0.219259876645935,0,0.512900250232778,0,0,0,0.54941678891006,0.247528499761764,0,0,0,0,2.31072925671967,0.921022048356777,0.689182862422653,0.751941714077915,0.580066775656914,0.511359764496605,0,0.330569830721956,0,0,0,0,0,0,0.616067160352178,1.06461206063404,0.869932992075073,0.18532421910392,0,0,0,0.190630193923825,1.79128453917934,1.71175595213568,0.636406495851874,0,0.539617372749944,0.823611089208164,1.06031162111118,0.404364963146632,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,2.31510213706675,1.9676842561399,0,0.6196469961995,0.281695602532241,0.143411352204052,0,0,0.709522128141196,0.422215270595328,0.658589785919804,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.593929361665277,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0.715880777515084,0.246169610922139,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,1.4655614944298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0.728341138602278,0,0,0,0.126373159256976,0,0,0,0,0,0,1.42304773014896,0.138674673013139,0,0.0979923974143777,0,0,0.859930162358083,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0.999048047910651,0,0,0,0,0,0,3.80531777006119,5.33474516192899,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,3.44496185301621,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.511164065356265,0.113312091520126,0,0,0.258565912723101,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,2.38807684618998,0.701139929541673,1.66441758450784,0.568209015825267,0.251567901752575,4.44905610798268,0.228840068396924,1.36107831386915,1.24349760466224,0.295710299979268,0.318593534327405,0,0.155262956876259,0.414706207840855,0,1.5652351854352,0,0,0.406870733204662,0,0.107410557042488,0,0.398095888698616,2.00013882331577,1.03018711554838,1.01024846629776,0,0.192619830407303,0,0,0.453411851024545,0,0,0,2.16161013012681,0,0.176689145945881,0,0.675769762612291,0.76872455576384,1.0362910251936,0,0,0,0,0,0,1.72041036127604,0,0,0,0,0,2.76158925377761,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.352675943690684,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,3.94422421706063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,2.79185747097888,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p3@S100A3 | |short_description=p3@S100A3 | ||
}} | }} |
Latest revision as of 05:52, 17 September 2015
Short description: | p3@S100A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_S100A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000368712_5end |
EntrezGene: | S100A3 |
HGNC: | 10493 |
UniProt: | P33764 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 2.54e-18 | 8 |
visceral preadipocyte | 1.05e-09 | 3 |
preadipocyte | 1.56e-08 | 12 |
somatic stem cell | 8.10e-08 | 433 |
annulus pulposus cell | 1.40e-07 | 2 |
multi fate stem cell | 1.56e-07 | 427 |
subcutaneous preadipocyte | 1.65e-07 | 2 |
stem cell | 1.86e-07 | 441 |
smooth muscle cell of trachea | 2.63e-07 | 2 |
skeletal muscle myoblast | 3.58e-07 | 4 |
bronchial smooth muscle cell | 4.59e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.87e-13 | 14 |
dermis | 4.07e-08 | 9 |
dermatome | 4.07e-08 | 9 |
future dermis | 4.07e-08 | 9 |
annulus fibrosus | 1.40e-07 | 2 |
fibrocartilage | 1.40e-07 | 2 |
annulus fibrosus disci intervertebralis | 1.40e-07 | 2 |
integument | 5.63e-07 | 46 |
integumental system | 5.63e-07 | 46 |
somite | 6.21e-07 | 71 |
presomitic mesoderm | 6.21e-07 | 71 |
presumptive segmental plate | 6.21e-07 | 71 |
dermomyotome | 6.21e-07 | 71 |
trunk paraxial mesoderm | 6.21e-07 | 71 |
paraxial mesoderm | 8.65e-07 | 72 |
presumptive paraxial mesoderm | 8.65e-07 | 72 |
connective tissue | 8.89e-07 | 371 |