FFCP PHASE1:Hg19::chr1:153003506..153003511,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6699 | |EntrezGene=6699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11260 | |HGNC=11260 | ||
|TSSclassifier=strong | |||
|UniProt=P22528 | |UniProt=P22528 | ||
|association_with_transcript=-166bp_to_ENST00000307098_5end | |association_with_transcript=-166bp_to_ENST00000307098_5end | ||
|cluster_id=chr1:153003506..153003511,+ | |||
|description=CAGE_peak_7_at_SPRR1B_5end | |description=CAGE_peak_7_at_SPRR1B_5end | ||
|id=chr1:153003506..153003511,+ | |id=chr1:153003506..153003511,+ | ||
|ontology_enrichment_celltype=CL:0000622!6.28e-33!5;CL:0000154!1.98e-27!6;CL:0002159!6.94e-24!13;CL:0002076!5.78e-23!43;CL:0002623!2.14e-20!3;CL:0000362!2.47e-20!8;CL:0000150!3.02e-18!9;CL:0000240!2.13e-17!6;CL:0000311!2.13e-17!6;CL:0000079!2.13e-17!6;CL:0000237!2.13e-17!6;CL:0000036!2.13e-17!6;CL:0000357!2.13e-17!6;CL:0000114!2.13e-17!6;CL:0000223!4.69e-16!59;CL:0002251!1.90e-14!21;CL:0000317!2.46e-14!2;CL:1000448!2.46e-14!2;CL:0002308!2.46e-14!2;CL:0002140!2.46e-14!2;CL:0000575!3.43e-14!2;CL:0002368!2.65e-12!13;CL:0000312!2.93e-12!5;CL:0002077!1.49e-11!33;CL:0002621!8.52e-10!3;CL:0000068!1.44e-09!3;CL:0000069!1.44e-09!3;CL:0000307!1.44e-09!3;CL:0000377!1.44e-09!3;CL:0000066!4.90e-09!254;CL:0002336!1.18e-07!1;CL:0002261!1.18e-07!1;CL:0002170!1.18e-07!1;CL:0000220!2.25e-07!246;CL:0002321!2.78e-07!248;CL:0002202!4.06e-07!9;CL:0002632!4.06e-07!9;CL:0000076!4.87e-07!62 | |ontology_enrichment_celltype=CL:0000622!6.28e-33!5;CL:0000154!1.98e-27!6;CL:0002159!6.94e-24!13;CL:0002076!5.78e-23!43;CL:0002623!2.14e-20!3;CL:0000362!2.47e-20!8;CL:0000150!3.02e-18!9;CL:0000240!2.13e-17!6;CL:0000311!2.13e-17!6;CL:0000079!2.13e-17!6;CL:0000237!2.13e-17!6;CL:0000036!2.13e-17!6;CL:0000357!2.13e-17!6;CL:0000114!2.13e-17!6;CL:0000223!4.69e-16!59;CL:0002251!1.90e-14!21;CL:0000317!2.46e-14!2;CL:1000448!2.46e-14!2;CL:0002308!2.46e-14!2;CL:0002140!2.46e-14!2;CL:0000575!3.43e-14!2;CL:0002368!2.65e-12!13;CL:0000312!2.93e-12!5;CL:0002077!1.49e-11!33;CL:0002621!8.52e-10!3;CL:0000068!1.44e-09!3;CL:0000069!1.44e-09!3;CL:0000307!1.44e-09!3;CL:0000377!1.44e-09!3;CL:0000066!4.90e-09!254;CL:0002336!1.18e-07!1;CL:0002261!1.18e-07!1;CL:0002170!1.18e-07!1;CL:0000220!2.25e-07!246;CL:0002321!2.78e-07!248;CL:0002202!4.06e-07!9;CL:0002632!4.06e-07!9;CL:0000076!4.87e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002623;3.27e-23;3!CL:0000312;1.60e-14;5!CL:0000622;1.60e-14;5!CL:0000240;2.45e-12;6!CL:0000311;2.45e-12;6!CL:0000079;2.45e-12;6!CL:0000237;2.45e-12;6!CL:0000154;2.45e-12;6!CL:0000150;1.12e-08;9!CL:0000362;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.62e-23,3;CL:0000622,1.40e-14,5;CL:0000312,1.83e-14,5;CL:0000154,2.19e-12,6;CL:0000240,2.74e-12,6;CL:0000311,2.74e-12,6;CL:0000079,2.74e-12,6;CL:0000237,2.74e-12,6;CL:0000036,2.74e-12,6;CL:0000357,2.74e-12,6;CL:0000114,2.74e-12,6;CL:0000150,1.04e-08,9;CL:0000362,1.21e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.45e-12;6!CL:0000114;2.45e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;1.60e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.60e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0000166!5.76e-19!21;UBERON:0000165!1.55e-17!28;UBERON:0000930!1.55e-17!28;UBERON:0001004!3.33e-17!72;UBERON:0003102!2.01e-16!95;UBERON:0001444!1.62e-14!48;UBERON:0002419!2.46e-14!2;UBERON:0007771!2.46e-14!2;UBERON:0003297!2.46e-14!2;UBERON:0001821!2.46e-14!2;UBERON:0003487!2.46e-14!2;UBERON:0001820!2.46e-14!2;UBERON:0005089!2.46e-14!2;UBERON:0005088!2.46e-14!2;UBERON:0000161!8.94e-14!35;UBERON:0000078!1.05e-12!18;UBERON:0001003!1.52e-11!14;UBERON:0007376!1.52e-11!14;UBERON:0007383!1.52e-11!14;UBERON:0004119!3.24e-11!169;UBERON:0000925!3.24e-11!169;UBERON:0006595!3.24e-11!169;UBERON:0001042!1.38e-10!10;UBERON:0009145!1.38e-10!10;UBERON:0003408!1.49e-10!10;UBERON:0001044!1.81e-10!6;UBERON:0003293!1.81e-10!6;UBERON:0003294!1.81e-10!6;UBERON:0010047!1.81e-10!6;UBERON:0000167!1.81e-10!6;UBERON:0000065!2.07e-10!53;UBERON:0001949!8.52e-10!3;UBERON:0001723!9.30e-10!3;UBERON:0001033!9.30e-10!3;UBERON:0010056!9.30e-10!3;UBERON:0006562!1.24e-09!11;UBERON:0003126!1.01e-08!7;UBERON:0001005!1.01e-08!7;UBERON:0001041!1.14e-08!98;UBERON:0001007!1.43e-08!155;UBERON:0001555!1.43e-08!155;UBERON:0007026!1.43e-08!155;UBERON:0002372!4.99e-08!1;UBERON:0001961!4.99e-08!1;UBERON:0001744!4.99e-08!1;UBERON:0001735!4.99e-08!1;UBERON:0000072!7.31e-08!46;UBERON:0007196!1.44e-07!14;UBERON:0001558!1.44e-07!14;UBERON:0000997!1.54e-07!1;UBERON:0005056!1.54e-07!1;UBERON:0000964!1.59e-07!4;UBERON:0004348!1.59e-07!4;UBERON:0005427!1.59e-07!4;UBERON:0001043!1.93e-07!4;UBERON:0009143!1.93e-07!4;UBERON:0000077!5.00e-07!130;UBERON:0004921!5.00e-07!129;UBERON:0004185!5.00e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;2.45e-12;6!UBERON:0001044;2.45e-12;6!UBERON:0001560;2.45e-12;6!UBERON:0003293;2.45e-12;6!UBERON:0003294;2.45e-12;6!UBERON:0010047;2.45e-12;6!UBERON:0003408;2.45e-12;6!UBERON:0000167;2.45e-12;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.19e-12,6;UBERON:0003293,2.19e-12,6;UBERON:0003294,2.19e-12,6;UBERON:0010047,2.19e-12,6;UBERON:0000167,2.19e-12,6;UBERON:0000002,2.45e-12,6;UBERON:0001560,2.45e-12,6;UBERON:0003408,5.73e-08,10 | |||
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|short_description=p7@SPRR1B | |short_description=p7@SPRR1B | ||
}} | }} |
Latest revision as of 04:25, 17 September 2015
Short description: | p7@SPRR1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SPRR1B_5end |
Coexpression cluster: | NA |
Association with transcript: | -166bp_to_ENST00000307098_5end |
EntrezGene: | SPRR1B |
HGNC: | 11260 |
UniProt: | P22528 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.62e-23 | 3 |
acinar cell | 1.40e-14 | 5 |
keratinocyte | 1.83e-14 | 5 |
protein secreting cell | 2.19e-12 | 6 |
stratified squamous epithelial cell | 2.74e-12 | 6 |
keratin accumulating cell | 2.74e-12 | 6 |
stratified epithelial cell | 2.74e-12 | 6 |
keratinizing barrier epithelial cell | 2.74e-12 | 6 |
epithelial fate stem cell | 2.74e-12 | 6 |
stratified epithelial stem cell | 2.74e-12 | 6 |
surface ectodermal cell | 2.74e-12 | 6 |
glandular epithelial cell | 1.04e-08 | 9 |
epidermal cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.19e-12 | 6 |
gland of oral region | 2.19e-12 | 6 |
gland of foregut | 2.19e-12 | 6 |
oral gland | 2.19e-12 | 6 |
oral cavity | 2.19e-12 | 6 |
uterine cervix | 2.45e-12 | 6 |
neck of organ | 2.45e-12 | 6 |
gland of gut | 5.73e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.60e-14 | 5 |