FFCP PHASE1:Hg19::chr1:151032040..151032115,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56882 | |EntrezGene=56882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17719 | |HGNC=17719 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRR8 | |UniProt=Q9NRR8 | ||
|association_with_transcript=0bp_to_ENST00000357235,ENST00000483763,ENST00000492796_5end | |association_with_transcript=0bp_to_ENST00000357235,ENST00000483763,ENST00000492796_5end | ||
|cluster_id=chr1:151032040..151032115,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_CDC42SE1_5end | |description=CAGE_peak_1_at_CDC42SE1_5end | ||
|id=chr1:151032040..151032115,- | |id=chr1:151032040..151032115,- | ||
|ontology_enrichment_celltype=CL:0000738!7.55e-40!140;CL:0000988!1.31e-33!182;CL:0000037!3.31e-33!172;CL:0000566!3.31e-33!172;CL:0002032!1.12e-32!165;CL:0000837!1.12e-32!165;CL:0002087!2.55e-31!119;CL:0002031!4.31e-30!124;CL:0000766!5.04e-26!76;CL:0000763!1.32e-21!112;CL:0000049!1.32e-21!112;CL:0000557!2.25e-21!71;CL:0002057!3.39e-21!42;CL:0002009!5.29e-21!65;CL:0002194!6.18e-20!63;CL:0000576!6.18e-20!63;CL:0000040!6.18e-20!63;CL:0000559!6.18e-20!63;CL:0000839!3.72e-19!70;CL:0000860!1.30e-18!45;CL:0000791!8.92e-11!18;CL:0000789!8.92e-11!18;CL:0002420!8.92e-11!18;CL:0002419!8.92e-11!18;CL:0000790!8.92e-11!18;CL:0000542!3.49e-10!53;CL:0000051!3.49e-10!53;CL:0000838!4.95e-10!52;CL:0000084!4.39e-09!25;CL:0000827!4.39e-09!25;CL:0000625!1.03e-07!11 | |ontology_enrichment_celltype=CL:0000738!7.55e-40!140;CL:0000988!1.31e-33!182;CL:0000037!3.31e-33!172;CL:0000566!3.31e-33!172;CL:0002032!1.12e-32!165;CL:0000837!1.12e-32!165;CL:0002087!2.55e-31!119;CL:0002031!4.31e-30!124;CL:0000766!5.04e-26!76;CL:0000763!1.32e-21!112;CL:0000049!1.32e-21!112;CL:0000557!2.25e-21!71;CL:0002057!3.39e-21!42;CL:0002009!5.29e-21!65;CL:0002194!6.18e-20!63;CL:0000576!6.18e-20!63;CL:0000040!6.18e-20!63;CL:0000559!6.18e-20!63;CL:0000839!3.72e-19!70;CL:0000860!1.30e-18!45;CL:0000791!8.92e-11!18;CL:0000789!8.92e-11!18;CL:0002420!8.92e-11!18;CL:0002419!8.92e-11!18;CL:0000790!8.92e-11!18;CL:0000542!3.49e-10!53;CL:0000051!3.49e-10!53;CL:0000838!4.95e-10!52;CL:0000084!4.39e-09!25;CL:0000827!4.39e-09!25;CL:0000625!1.03e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.34e-15;33!CL:0002057;1.34e-15;33!CL:0000576;2.59e-14;48!CL:0000473;6.15e-14;39!CL:0000234;6.15e-14;39!CL:0000766;1.31e-12;69!CL:0000791;8.95e-11;18!CL:0000789;8.95e-11;18!CL:0002419;8.95e-11;18!CL:0002087;9.31e-11;104!CL:0000738;4.04e-09;136!CL:0000084;4.33e-09;25!CL:0000625;1.02e-07;11!CL:0000763;2.60e-07;100!CL:0000988;6.02e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.54e-42,136;CL:0000988,4.86e-35,177;CL:0000037,7.15e-35,168;CL:0002032,2.24e-34,161;CL:0000837,2.24e-34,161;CL:0002087,1.97e-33,115;CL:0002031,4.46e-32,120;CL:0000766,1.23e-28,72;CL:0000557,9.66e-24,67;CL:0002009,1.65e-23,61;CL:0000763,2.75e-23,108;CL:0000049,2.75e-23,108;CL:0002194,2.11e-22,59;CL:0000576,2.11e-22,59;CL:0000040,2.11e-22,59;CL:0000559,2.11e-22,59;CL:0000473,5.10e-22,48;CL:0000234,5.10e-22,48;CL:0000839,2.35e-21,66;CL:0000860,3.39e-21,42;CL:0002057,3.39e-21,42;CL:0000791,8.92e-11,18;CL:0000789,8.92e-11,18;CL:0002420,8.92e-11,18;CL:0002419,8.92e-11,18;CL:0000790,8.92e-11,18;CL:0000542,3.49e-10,53;CL:0000051,3.49e-10,53;CL:0000838,4.95e-10,52;CL:0000084,4.39e-09,25;CL:0000827,4.39e-09,25;CL:0000625,1.03e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-15;42!CL:0000790;8.95e-11;18!CL:0000049;8.41e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.44e-25!102;UBERON:0003061!9.44e-25!102;UBERON:0002193!7.64e-24!112;UBERON:0003081!1.35e-16!216;UBERON:0002371!1.24e-15!80;UBERON:0001474!1.51e-14!86;UBERON:0002405!1.15e-10!115;UBERON:0000178!1.04e-09!15;UBERON:0000179!1.04e-09!15;UBERON:0000463!1.04e-09!15;UBERON:0004765!2.27e-09!101;UBERON:0001434!2.27e-09!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.03e-09;15!UBERON:0000179;1.03e-09;15!UBERON:0000463;1.03e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.55e-27,98;UBERON:0003061,9.55e-27,98;UBERON:0002193,1.19e-25,108;UBERON:0002405,4.45e-18,93;UBERON:0002371,2.49e-17,76;UBERON:0003081,2.26e-16,203;UBERON:0001474,4.53e-16,82;UBERON:0004765,1.09e-13,90;UBERON:0000178,1.04e-09,15;UBERON:0000179,1.04e-09,15;UBERON:0000463,1.04e-09,15;UBERON:0001434,5.41e-09,100 | |||
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| ||
|short_description=p1@CDC42SE1 | |short_description=p1@CDC42SE1 | ||
}} | }} |
Latest revision as of 00:00, 17 September 2015
Short description: | p1@CDC42SE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDC42SE1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000357235, ENST00000483763, ENST00000492796_5end |
EntrezGene: | CDC42SE1 |
HGNC: | 17719 |
UniProt: | Q9NRR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.55e-27 | 98 |
blood island | 9.55e-27 | 98 |
hemolymphoid system | 1.19e-25 | 108 |
immune system | 4.45e-18 | 93 |
bone marrow | 2.49e-17 | 76 |
lateral plate mesoderm | 2.26e-16 | 203 |
bone element | 4.53e-16 | 82 |
skeletal element | 1.09e-13 | 90 |
blood | 1.04e-09 | 15 |
haemolymphatic fluid | 1.04e-09 | 15 |
organism substance | 1.04e-09 | 15 |
skeletal system | 5.41e-09 | 100 |