FFCP PHASE1:Hg19::chr11:27741110..27741114,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:27741110..27741114,-
|short_description=p5@BDNF
|description=CAGE_peak_5_at_BDNF_5end
|association_with_transcript=179bp_to_ENST00000532997,NM_001143807,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=627 | |EntrezGene=627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1033 | |HGNC=1033 | ||
|TSSclassifier=strong | |||
|UniProt=P23560 | |UniProt=P23560 | ||
|association_with_transcript=179bp_to_ENST00000532997,NM_001143807,uc001mrw.3_5end | |||
|cluster_id=chr11:27741110..27741114,- | |||
|description=CAGE_peak_5_at_BDNF_5end | |||
|id=chr11:27741110..27741114,- | |||
|ontology_enrichment_celltype=CL:0000144!4.44e-14!625;CL:0002371!6.08e-13!591;CL:0000548!2.97e-12!679;CL:0000004!2.97e-12!679;CL:0000255!2.97e-12!679;CL:0000012!3.48e-12!682;CL:0000003!4.49e-11!722;CL:0000055!8.08e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@BDNF | |||
}} | }} |
Latest revision as of 12:36, 17 September 2015
Short description: | p5@BDNF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BDNF_5end |
Coexpression cluster: | NA |
Association with transcript: | 179bp_to_ENST00000532997, NM_001143807, uc001mrw.3_5end |
EntrezGene: | BDNF |
HGNC: | 1033 |
UniProt: | P23560 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data