FFCP PHASE1:Hg19::chr1:1361494..1361497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643965 | |EntrezGene=643965 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37099 | |HGNC=37099 | ||
|TSSclassifier=strong | |||
|UniProt=A6NKF7 | |UniProt=A6NKF7 | ||
|association_with_transcript=-10bp_to_NM_001146685,uc010nyp.1_5end | |association_with_transcript=-10bp_to_NM_001146685,uc010nyp.1_5end | ||
|cluster_id=chr1:1361494..1361497,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_7_at_TMEM88B_5end | |description=CAGE_peak_7_at_TMEM88B_5end | ||
|id=chr1:1361494..1361497,+ | |id=chr1:1361494..1361497,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.78e-15;7!CL:0000586;1.78e-15;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.65e-15,7;CL:0000586,1.65e-15,7 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.55e-98;1!UBERON:0003056;5.04e-34;3!UBERON:0009117;2.87e-11;10!UBERON:0005564;2.87e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.24e-56!57;UBERON:0005068!2.24e-56!57;UBERON:0006241!2.24e-56!57;UBERON:0007135!2.24e-56!57;UBERON:0002616!1.06e-42!59;UBERON:0001017!1.51e-42!82;UBERON:0005743!2.77e-40!86;UBERON:0000073!1.14e-38!94;UBERON:0001016!1.14e-38!94;UBERON:0000955!4.98e-38!69;UBERON:0006238!4.98e-38!69;UBERON:0003075!2.75e-35!86;UBERON:0007284!2.75e-35!86;UBERON:0002346!1.97e-33!90;UBERON:0002780!7.49e-33!41;UBERON:0001890!7.49e-33!41;UBERON:0006240!7.49e-33!41;UBERON:0003080!5.57e-32!42;UBERON:0002020!7.44e-32!34;UBERON:0003528!7.44e-32!34;UBERON:0001893!1.05e-31!34;UBERON:0002308!9.02e-30!9;UBERON:0000125!9.02e-30!9;UBERON:0002791!5.02e-29!33;UBERON:0003076!3.27e-27!15;UBERON:0003057!3.27e-27!15;UBERON:0007023!4.96e-27!115;UBERON:0001869!6.40e-26!32;UBERON:0002298!8.44e-26!8;UBERON:0009663!9.69e-22!7;UBERON:0004121!1.65e-21!169;UBERON:0000924!7.62e-21!173;UBERON:0006601!7.62e-21!173;UBERON:0003056!8.95e-21!61;UBERON:0000033!1.83e-20!123;UBERON:0004732!2.62e-20!13;UBERON:0000153!3.17e-19!129;UBERON:0007811!3.17e-19!129;UBERON:0002420!8.83e-17!9;UBERON:0007245!8.83e-17!9;UBERON:0010009!8.83e-17!9;UBERON:0010011!8.83e-17!9;UBERON:0000454!8.83e-17!9;UBERON:0004733!9.02e-17!12;UBERON:0002028!9.02e-17!12;UBERON:0007277!9.02e-17!12;UBERON:0000025!1.02e-16!194;UBERON:0002240!4.12e-14!3;UBERON:0001896!6.39e-14!3;UBERON:0005290!6.39e-14!3;UBERON:0010096!6.39e-14!3;UBERON:0006331!6.98e-14!3;UBERON:0002619!9.39e-14!22;UBERON:0000988!1.59e-13!3;UBERON:0004111!5.00e-13!241;UBERON:0001950!4.62e-12!20;UBERON:0000956!5.58e-12!25;UBERON:0000203!5.58e-12!25;UBERON:0005162!1.84e-10!2;UBERON:0000122!1.84e-10!2;UBERON:0000369!4.12e-10!4;UBERON:0002435!4.12e-10!4;UBERON:0000204!4.12e-10!4;UBERON:0010082!4.12e-10!4;UBERON:0001875!5.93e-10!2;UBERON:0006514!5.93e-10!2;UBERON:0002148!6.20e-10!2;UBERON:0009662!6.20e-10!2;UBERON:0001870!6.48e-10!2;UBERON:0000477!8.39e-10!286;UBERON:0005174!1.21e-08!5;UBERON:0001137!1.21e-08!5;UBERON:0000483!1.58e-08!309;UBERON:0000119!2.25e-08!312;UBERON:0000475!4.95e-08!365;UBERON:0002680!1.00e-07!9;UBERON:0001895!1.00e-07!9;UBERON:0010092!1.00e-07!9;UBERON:0000064!3.32e-07!219;UBERON:0000200!4.51e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.55e-98;1!UBERON:0001785;1.55e-98;1!UBERON:0002464;1.55e-98;1!UBERON:0004904;1.55e-98;1!UBERON:0001021;1.55e-98;1!UBERON:0003714;3.52e-50;2!UBERON:0005162;3.52e-50;2!UBERON:0000122;3.52e-50;2!UBERON:0000473;1.00e-13;8!UBERON:0000010;2.31e-12;8!UBERON:0003135;2.27e-10;11!UBERON:0004732;5.49e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.55e-98,1;UBERON:0001785,2.55e-98,1;UBERON:0002464,2.55e-98,1;UBERON:0004904,2.55e-98,1;UBERON:0001021,2.55e-98,1;UBERON:0003902,2.55e-98,1;UBERON:0005425,2.55e-98,1;UBERON:0003714,4.52e-50,2;UBERON:0005162,4.52e-50,2;UBERON:0000122,4.52e-50,2;UBERON:0001781,7.14e-26,4;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0000473,9.39e-14,8;UBERON:0000010,2.45e-12,8;UBERON:0003135,2.16e-10,11;UBERON:0004732,5.70e-09,13 | |||
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| ||
|short_description=p7@TMEM88B | |short_description=p7@TMEM88B | ||
}} | }} |
Latest revision as of 15:29, 16 September 2015
Short description: | p7@TMEM88B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TMEM88B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -10bp_to_NM_001146685, uc010nyp.1_5end |
EntrezGene: | TMEM88B |
HGNC: | 37099 |
UniProt: | A6NKF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.65e-15 | 7 |
germ cell | 1.65e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.55e-98 | 1 |
cranial nerve | 2.55e-98 | 1 |
nerve trunk | 2.55e-98 | 1 |
nerve connecting eye with brain | 2.55e-98 | 1 |
nerve | 2.55e-98 | 1 |
retinal neural layer | 2.55e-98 | 1 |
presumptive neural retina | 2.55e-98 | 1 |
neural tissue | 4.52e-50 | 2 |
multi cell component structure | 4.52e-50 | 2 |
neuron projection bundle | 4.52e-50 | 2 |
layer of retina | 7.14e-26 | 4 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
testis | 9.39e-14 | 8 |
peripheral nervous system | 2.45e-12 | 8 |
male reproductive organ | 2.16e-10 | 11 |
segmental subdivision of nervous system | 5.70e-09 | 13 |