FFCP PHASE1:Hg19::chr1:1289800..1289816,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54587 | |EntrezGene=54587 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7542 | |HGNC=7542 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_ENST00000473097_5end | |association_with_transcript=37bp_to_ENST00000473097_5end | ||
|cluster_id=chr1:1289800..1289816,- | |||
|coexpression_cluster_id=C1000 | |||
|description=CAGE_peak_11_at_MXRA8_5end | |description=CAGE_peak_11_at_MXRA8_5end | ||
|id=chr1:1289800..1289816,- | |id=chr1:1289800..1289816,- | ||
|ontology_enrichment_celltype=CL:0000055!3.98e-26!180;CL:0000057!9.88e-20!75;CL:0002620!1.09e-12!23;CL:0002334!1.17e-09!12;CL:0000723!2.12e-08!436;CL:0000048!2.18e-08!430;CL:0000680!5.22e-08!57;CL:0000056!5.22e-08!57;CL:0000355!5.22e-08!57;CL:0000034!7.13e-08!444;CL:0000183!1.95e-07!59;CL:0000187!9.64e-07!54 | |ontology_enrichment_celltype=CL:0000055!3.98e-26!180;CL:0000057!9.88e-20!75;CL:0002620!1.09e-12!23;CL:0002334!1.17e-09!12;CL:0000723!2.12e-08!436;CL:0000048!2.18e-08!430;CL:0000680!5.22e-08!57;CL:0000056!5.22e-08!57;CL:0000355!5.22e-08!57;CL:0000034!7.13e-08!444;CL:0000183!1.95e-07!59;CL:0000187!9.64e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.80e-19;12!CL:0002559;1.23e-10;5!CL:0000135;1.28e-10;3!CL:0000388;1.28e-10;3!CL:0002580;2.42e-10;3!CL:0002579;1.10e-09;3!CL:0000136;1.56e-08;13!CL:0000153;2.03e-08;9!CL:0000447;2.03e-08;9!CL:0002561;1.41e-07;2!CL:0000499;1.87e-07;28!CL:0002617;1.88e-07;2!CL:0002602;8.37e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.12e-19,12;CL:0000057,7.50e-13,76;CL:0000136,1.22e-12,15;CL:0002559,9.04e-11,5;CL:0000135,1.01e-10,3;CL:0000388,1.01e-10,3;CL:0002580,2.04e-10,3;CL:0002579,5.39e-10,3;CL:0000153,3.95e-08,9;CL:0000447,3.95e-08,9;CL:0002320,8.35e-08,361;CL:0002617,1.13e-07,2;CL:0002561,1.17e-07,2;CL:0000499,2.47e-07,28;CL:0000048,4.58e-07,427;CL:0002602,8.15e-07,2;CL:0000723,8.21e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.28e-10;3!DOID:127;1.28e-10;3!DOID:0060072;4.70e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.01e-10,3;DOID:127,1.01e-10,3;DOID:0060072,3.95e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.10e-13!83;UBERON:0002329!5.10e-13!83;UBERON:0003077!5.10e-13!83;UBERON:0003059!5.10e-13!83;UBERON:0007282!5.10e-13!83;UBERON:0009618!5.10e-13!83;UBERON:0007285!5.10e-13!83;UBERON:0003102!6.89e-11!95;UBERON:0002199!1.16e-10!45;UBERON:0002416!1.16e-10!45;UBERON:0004290!5.04e-10!70;UBERON:0002097!8.61e-10!40;UBERON:0004923!1.31e-08!57;UBERON:0005256!1.41e-08!143;UBERON:0000486!2.56e-08!82;UBERON:0000475!5.88e-08!365;UBERON:0002100!1.31e-07!216;UBERON:0001134!1.33e-07!61;UBERON:0002036!1.33e-07!61;UBERON:0003082!1.33e-07!61;UBERON:0003688!2.72e-07!6;UBERON:0002358!2.72e-07!6;UBERON:0003684!2.72e-07!6;UBERON:0001178!2.72e-07!6;UBERON:0002385!4.55e-07!63;UBERON:0001015!4.55e-07!63;UBERON:0000383!4.55e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.90e-16;9!UBERON:0000042;1.90e-16;9!UBERON:0003688;3.48e-13;6!UBERON:0002358;3.48e-13;6!UBERON:0003684;3.48e-13;6!UBERON:0001178;3.48e-13;6!UBERON:0002073;1.23e-10;5!UBERON:0007846;1.28e-10;3!UBERON:0000043;1.28e-10;3!UBERON:0007845;1.28e-10;3!UBERON:0001013;9.81e-10;14!UBERON:0004905;1.63e-09;8!UBERON:0000982;1.63e-09;8!UBERON:0004770;1.63e-09;8!UBERON:0000310;7.32e-08;10!UBERON:0005933;1.41e-07;2!UBERON:0005942;1.41e-07;2!UBERON:0005932;1.41e-07;2!UBERON:0005406;2.17e-07;2!UBERON:0001443;4.13e-07;11!UBERON:0006444;8.37e-07;2!UBERON:0001995;8.37e-07;2!UBERON:0004715;8.37e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.89e-13,6;UBERON:0002358,1.89e-13,6;UBERON:0003684,1.89e-13,6;UBERON:0001178,1.89e-13,6;UBERON:0004457,3.40e-12,12;UBERON:0000042,3.40e-12,12;UBERON:0002073,9.04e-11,5;UBERON:0005086,9.04e-11,5;UBERON:0007846,1.01e-10,3;UBERON:0000043,1.01e-10,3;UBERON:0007845,1.01e-10,3;UBERON:0001013,1.35e-09,14;UBERON:0004905,2.01e-09,8;UBERON:0000982,2.01e-09,8;UBERON:0004770,2.01e-09,8;UBERON:0000310,5.34e-08,10;UBERON:0002384,6.76e-08,371;UBERON:0005933,1.17e-07,2;UBERON:0005942,1.17e-07,2;UBERON:0005932,1.17e-07,2;UBERON:0005406,2.08e-07,2;UBERON:0001443,3.11e-07,11;UBERON:0006444,8.15e-07,2;UBERON:0001995,8.15e-07,2;UBERON:0004715,8.15e-07,2 | |||
|phase1_expression=1.99846217197612,7.06531728840244,0.986680828671798,5.00366491765652,3.5756887554183,4.36169262050184,0,0.631719873426831,1.30592814099919,0.245733936501509,0,0.436882744260345,0.527533956456907,1.48519623552056,1.32558950291166,0,1.20538905604795,0,0,0.246242116153576,1.02000345622126,0.313454721478088,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.255725123687061,1.0843174571537,1.00267582127178,3.18662341713812,0,0.973269740605272,0.283604451492204,0.886917589850256,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0,2.29469296599051,2.12801029319014,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0,0.312160076830321,0.570471821544449,0.448346041655403,0.587172493218824,0.161872944368132,0,0,0.61417158655884,0.619954687054593,0,3.21447008062124,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,4.59731693698529,1.35214253015937,0.113432183160021,0.89694817844431,0.427114777637135,0.211931901159562,1.20036438433761,0.309157587715317,2.06112432036503,1.30281799432113,0.506328996723799,0.974370051611986,0.757301322732344,0.552299391853796,0.646584227275248,2.13005755509969,0.806016785821122,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,4.5026865673502,0,2.3218396401599,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0.531876233169741,0,0.514414748524284,0,0.799266537048298,0.142977993658148,1.62786481617433,0.823240336780769,0,0.355391948742546,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.289562613335158,0.821905290201534,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,3.00102312635806,0.542530047399471,1.66376689224646,4.46072471992904,0.473107245101804,0.937131319941706,0.601892199455438,0,2.0694614258501,0.664225598535437,0.368738337083406,0.260650843404249,0.391602314925481,1.37257369524342,0,0,0,0.303127571446259,0,0,2.48107807818777,1.38115775959256,10.1037633995906,1.92208723883551,2.04682899626681,1.93024705372329,1.48418066444991,0.925258162815933,0,0.0821271560138091,4.15403543346897,1.27831416305955,0,0,0,0.459257792658427,0.728364672026868,1.44236856455367,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.650756789328606,0,0,0.165018999841176,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0.307007349452259,0,0.214840489736547,0.435050081742686,0.170453254832202,0,0,0,0,0,0,1.25924938732256,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0.571890581771475,0.255897791311334,0.855877976067841,0,0,0.179872457583315,0.823611089208164,0.589062011728432,0,1.58510321173008,0.842516912477962,0,0.243713489631284,2.11300293513511,0.136499911407986,1.41405431953713,3.39024349860728,0,0.66343897524122,1.31535265576129,0,0.655894752046633,0,0.6196469961995,0.281695602532241,0.143411352204052,0.196498082026242,0,0,3.37772216476263,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.593929361665277,0.921482106297696,0,0,0,0,0,0.796991953004279,0.552567831062295,0.503865495708552,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,2.17199840701485,3.45688596480507,3.91904832131291,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0.434763085832475,0.74627401443437,1.16856654923612,1.10961172300523,0.378806010550178,0.754703705257725,0.889811221596536,0.228840068396924,0.151230923763239,0.466311601748341,0.295710299979268,0,0,0.155262956876259,0.414706207840855,0,0,0.300515217994437,0,0.406870733204662,0,0.107410557042488,0.928067519756987,0,1.60011105865261,2.06037423109676,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,3.87943538059752,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.397832444232549,0.0752103283492573,0,0,0.261906694481422,0,0,0.067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| ||
|short_description=p11@MXRA8 | |short_description=p11@MXRA8 | ||
}} | }} |
Latest revision as of 15:01, 16 September 2015
Short description: | p11@MXRA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MXRA8_5end |
Coexpression cluster: | C1000_Osteoblast_Preadipocyte_Hair_Adipocyte_tenocyte_Mesenchymal_leiomyoma |
Association with transcript: | 37bp_to_ENST00000473097_5end |
EntrezGene: | MXRA8 |
HGNC: | 7542 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.12e-19 | 12 |
fibroblast | 7.50e-13 | 76 |
fat cell | 1.22e-12 | 15 |
hair follicle cell | 9.04e-11 | 5 |
fibrocyte | 1.01e-10 | 3 |
tendon cell | 1.01e-10 | 3 |
preadipocyte of the breast | 2.04e-10 | 3 |
omentum preadipocyte | 5.39e-10 | 3 |
GAG secreting cell | 3.95e-08 | 9 |
carbohydrate secreting cell | 3.95e-08 | 9 |
connective tissue cell | 8.35e-08 | 361 |
adipocyte of breast | 1.13e-07 | 2 |
outer root sheath cell | 1.17e-07 | 2 |
stromal cell | 2.47e-07 | 28 |
multi fate stem cell | 4.58e-07 | 427 |
annulus pulposus cell | 8.15e-07 | 2 |
somatic stem cell | 8.21e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.89e-13 | 6 |
peritoneum | 1.89e-13 | 6 |
abdominal cavity | 1.89e-13 | 6 |
visceral peritoneum | 1.89e-13 | 6 |
cavity lining | 3.40e-12 | 12 |
serous membrane | 3.40e-12 | 12 |
hair follicle | 9.04e-11 | 5 |
hair follicle placode | 9.04e-11 | 5 |
dense regular connective tissue | 1.01e-10 | 3 |
tendon | 1.01e-10 | 3 |
regular connective tissue | 1.01e-10 | 3 |
adipose tissue | 1.35e-09 | 14 |
articulation | 2.01e-09 | 8 |
skeletal joint | 2.01e-09 | 8 |
articular system | 2.01e-09 | 8 |
breast | 5.34e-08 | 10 |
connective tissue | 6.76e-08 | 371 |
hair root sheath | 1.17e-07 | 2 |
hair outer root sheath | 1.17e-07 | 2 |
bulb of hair follicle | 1.17e-07 | 2 |
perirenal fat | 2.08e-07 | 2 |
chest | 3.11e-07 | 11 |
annulus fibrosus | 8.15e-07 | 2 |
fibrocartilage | 8.15e-07 | 2 |
annulus fibrosus disci intervertebralis | 8.15e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.01e-10 | 3 |
leiomyoma | 1.01e-10 | 3 |
benign neoplasm | 3.95e-08 | 4 |