FFCP PHASE1:Hg19::chr14:81421324..81421348,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7253 | |EntrezGene=7253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12373 | |HGNC=12373 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000557096_5end | |association_with_transcript=0bp_to_ENST00000557096_5end | ||
|cluster_id=chr14:81421324..81421348,+ | |||
|coexpression_cluster_id=C1733 | |||
|description=CAGE_peak_2_at_TSHR_5end | |description=CAGE_peak_2_at_TSHR_5end | ||
|id=chr14:81421324..81421348,+ | |id=chr14:81421324..81421348,+ | ||
|ontology_enrichment_celltype=CL:0000084!2.32e-07!25;CL:0000827!2.32e-07!25;CL:0000542!8.91e-07!53;CL:0000051!8.91e-07!53 | |ontology_enrichment_celltype=CL:0000084!2.32e-07!25;CL:0000827!2.32e-07!25;CL:0000542!8.91e-07!53;CL:0000051!8.91e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.02e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.15e-07,25;CL:0000827,2.15e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.59e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;6.59e-07;1!DOID:0060061;6.59e-07;1!DOID:8691;6.59e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,6.60e-07,1;DOID:0060061,6.60e-07,1;DOID:8691,6.60e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.80e-15!115;UBERON:0001049!2.29e-13!57;UBERON:0005068!2.29e-13!57;UBERON:0006241!2.29e-13!57;UBERON:0007135!2.29e-13!57;UBERON:0002616!1.35e-10!59;UBERON:0003076!1.00e-09!15;UBERON:0003057!1.00e-09!15;UBERON:0000955!3.27e-09!69;UBERON:0006238!3.27e-09!69;UBERON:0004733!8.67e-09!12;UBERON:0002028!8.67e-09!12;UBERON:0007277!8.67e-09!12;UBERON:0000073!3.10e-08!94;UBERON:0001016!3.10e-08!94;UBERON:0004732!6.33e-08!13;UBERON:0001017!7.96e-08!82;UBERON:0005743!8.99e-08!86;UBERON:0002308!9.72e-08!9;UBERON:0000125!9.72e-08!9;UBERON:0003075!2.83e-07!86;UBERON:0007284!2.83e-07!86;UBERON:0002780!5.90e-07!41;UBERON:0001890!5.90e-07!41;UBERON:0006240!5.90e-07!41;UBERON:0002298!7.94e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!1.80e-15!115;UBERON:0001049!2.29e-13!57;UBERON:0005068!2.29e-13!57;UBERON:0006241!2.29e-13!57;UBERON:0007135!2.29e-13!57;UBERON:0002616!1.35e-10!59;UBERON:0003076!1.00e-09!15;UBERON:0003057!1.00e-09!15;UBERON:0000955!3.27e-09!69;UBERON:0006238!3.27e-09!69;UBERON:0004733!8.67e-09!12;UBERON:0002028!8.67e-09!12;UBERON:0007277!8.67e-09!12;UBERON:0000073!3.10e-08!94;UBERON:0001016!3.10e-08!94;UBERON:0004732!6.33e-08!13;UBERON:0001017!7.96e-08!82;UBERON:0005743!8.99e-08!86;UBERON:0002308!9.72e-08!9;UBERON:0000125!9.72e-08!9;UBERON:0003075!2.83e-07!86;UBERON:0007284!2.83e-07!86;UBERON:0002780!5.90e-07!41;UBERON:0001890!5.90e-07!41;UBERON:0006240!5.90e-07!41;UBERON:0002298!7.94e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.86e-13;2!UBERON:0005058;8.86e-13;2!UBERON:0009113;8.86e-13;2!UBERON:0000341;2.08e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.02e-12,2;UBERON:0000974,1.94e-09,10;UBERON:0009722,1.14e-08,11;UBERON:0007690,1.14e-08,11;UBERON:0007029,7.82e-07,1;UBERON:0002370,8.52e-07,4;UBERON:0005058,8.52e-07,4;UBERON:0009113,8.52e-07,4;UBERON:0003295,8.52e-07,4;UBERON:0005562,8.52e-07,4 | |||
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| ||
|short_description=p2@TSHR | |short_description=p2@TSHR | ||
}} | }} |
Latest revision as of 07:50, 16 September 2015
Short description: | p2@TSHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TSHR_5end |
Coexpression cluster: | C1733_thymus_thyroid_throat_Hodgkin_CD4_vein_chronic |
Association with transcript: | 0bp_to_ENST00000557096_5end |
EntrezGene: | TSHR |
HGNC: | 12373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.15e-07 | 25 |
pro-T cell | 2.15e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
throat | 2.02e-12 | 2 |
neck | 1.94e-09 | 10 |
entire pharyngeal arch endoderm | 1.14e-08 | 11 |
early pharyngeal endoderm | 1.14e-08 | 11 |
surface | 7.82e-07 | 1 |
thymus | 8.52e-07 | 4 |
hemolymphoid system gland | 8.52e-07 | 4 |
thymic region | 8.52e-07 | 4 |
pharyngeal gland | 8.52e-07 | 4 |
thymus primordium | 8.52e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 6.60e-07 | 1 |
cutaneous T cell lymphoma | 6.60e-07 | 1 |
mycosis fungoides | 6.60e-07 | 1 |