FFCP PHASE1:Hg19::chr14:77431207..77431214,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:77431207..77431214,- | |||
|description=CAGE_peak_at_chr14:77431207..77431214,- | |description=CAGE_peak_at_chr14:77431207..77431214,- | ||
|id=chr14:77431207..77431214,- | |id=chr14:77431207..77431214,- | ||
|ontology_enrichment_celltype=CL:0000066!5.43e-14!254;CL:0002368!3.50e-12!13;CL:0002202!7.07e-12!9;CL:0002632!7.07e-12!9;CL:0002322!6.11e-10!5;CL:0002076!2.33e-08!43;CL:0000223!6.97e-08!59;CL:0000068!1.27e-07!3;CL:0000069!1.27e-07!3;CL:0000307!1.27e-07!3;CL:0000377!1.27e-07!3 | |ontology_enrichment_celltype=CL:0000066!5.43e-14!254;CL:0002368!3.50e-12!13;CL:0002202!7.07e-12!9;CL:0002632!7.07e-12!9;CL:0002322!6.11e-10!5;CL:0002076!2.33e-08!43;CL:0000223!6.97e-08!59;CL:0000068!1.27e-07!3;CL:0000069!1.27e-07!3;CL:0000307!1.27e-07!3;CL:0000377!1.27e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.39e-27;3!CL:0002202;1.62e-20;9!CL:0002632;1.62e-20;9!CL:0002368;1.98e-14;13!CL:0000322;7.25e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.39e-27,3;CL:0000069,1.39e-27,3;CL:0000307,1.39e-27,3;CL:0000377,1.39e-27,3;CL:0002202,1.42e-20,9;CL:0002632,1.42e-20,9;CL:0002368,1.81e-14,13;CL:0000322,6.34e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.39e-27;3!UBERON:0009847;7.25e-08;3!UBERON:0003353;7.25e-08;3 | |||
|ontology_enrichment_disease=DOID:305!2.76e-17!106;DOID:0050687!1.20e-15!143;DOID:1749!2.29e-13!14;DOID:14566!4.46e-13!239;DOID:162!6.15e-13!235 | |ontology_enrichment_disease=DOID:305!2.76e-17!106;DOID:0050687!1.20e-15!143;DOID:1749!2.29e-13!14;DOID:14566!4.46e-13!239;DOID:162!6.15e-13!235 | ||
|ontology_enrichment_disease_v019=DOID:2355;6.31e-21;1!DOID:74;3.70e-11;2!DOID:3910;3.70e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,5.16e-21,1;DOID:3910,3.02e-11,2;DOID:74,3.35e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007196!3.73e-07!14;UBERON:0001558!3.73e-07!14;UBERON:0005153!9.35e-07!37 | |ontology_enrichment_uberon=UBERON:0007196!3.73e-07!14;UBERON:0001558!3.73e-07!14;UBERON:0005153!9.35e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.35e-12;15!UBERON:0001558;1.35e-12;15!UBERON:0003126;2.00e-12;7!UBERON:0001005;2.00e-12;7!UBERON:0004903;3.70e-11;2!UBERON:0002173;3.70e-11;2!UBERON:0002186;3.70e-11;2!UBERON:0004821;7.25e-08;3!UBERON:0007499;7.25e-08;3!UBERON:0003215;7.25e-08;3!UBERON:0010368;7.25e-08;3!UBERON:0009911;7.25e-08;3!UBERON:0002299;7.25e-08;3!UBERON:0006524;7.25e-08;3!UBERON:0008874;7.25e-08;3!UBERON:0002169;7.25e-08;3!UBERON:0004894;7.25e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.25e-12,15;UBERON:0001558,1.25e-12,15;UBERON:0003126,2.00e-12,7;UBERON:0001005,2.00e-12,7;UBERON:0004903,3.02e-11,2;UBERON:0002173,3.02e-11,2;UBERON:0002186,3.02e-11,2;UBERON:0004821,6.34e-08,3;UBERON:0003215,6.34e-08,3;UBERON:0010368,6.34e-08,3;UBERON:0009911,6.34e-08,3;UBERON:0002299,6.34e-08,3;UBERON:0006524,6.34e-08,3;UBERON:0008874,6.34e-08,3;UBERON:0002169,6.34e-08,3;UBERON:0004894,6.34e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.116193942869518,0.207322110030741,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.402115889646523,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,2.68120910214315,2.17781969722645,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,4.91390727186376,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.728163130497081,0,1.98895302764489,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,1.2517279311405,0.254253650292766,0.472775363535873,0,0,0.173624994933292,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0.503464760927528,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0.586993856796269,0.485560759068186,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43944664511834,0,0,0.482259445395058,0,0.415440338029185,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0.462102664601353,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,1.30013224972365,0.111231401892069,0,0,0,0,0,0,0,0,2.20858708199438,0,0,0,0,0,0,0,0.170426809518315,0,0.4582137370881,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0.178553938605658,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0.509944148709909,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p@chr14:77431207..77431214,- | |short_description=p@chr14:77431207..77431214,- | ||
}} | }} |
Latest revision as of 23:00, 24 July 2015
Short description: | p@chr14:77431207..77431214, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:77431207..77431214, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.39e-27 | 3 |
branched duct epithelial cell | 1.39e-27 | 3 |
tracheal epithelial cell | 1.39e-27 | 3 |
tracheoblast | 1.39e-27 | 3 |
epithelial cell of tracheobronchial tree | 1.42e-20 | 9 |
epithelial cell of lower respiratory tract | 1.42e-20 | 9 |
respiratory epithelial cell | 1.81e-14 | 13 |
pneumocyte | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 1.25e-12 | 15 |
lower respiratory tract | 1.25e-12 | 15 |
trachea | 2.00e-12 | 7 |
respiratory airway | 2.00e-12 | 7 |
bronchoalveolar duct junction | 3.02e-11 | 2 |
alveolar duct | 3.02e-11 | 2 |
bronchiole | 3.02e-11 | 2 |
pulmonary alveolus epithelium | 6.34e-08 | 3 |
alveolus | 6.34e-08 | 3 |
pulmonary lobule | 6.34e-08 | 3 |
lobule | 6.34e-08 | 3 |
alveolus of lung | 6.34e-08 | 3 |
alveolar system | 6.34e-08 | 3 |
pulmonary acinus | 6.34e-08 | 3 |
alveolar sac | 6.34e-08 | 3 |
alveolar wall | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 5.16e-21 | 1 |
lung adenocarcinoma | 3.02e-11 | 2 |
hematopoietic system disease | 3.35e-11 | 2 |