FFCP PHASE1:Hg19::chr1:117307157..117307178,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=914 | |EntrezGene=914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1639 | |HGNC=1639 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-318bp_to_AK127925_5end | |association_with_transcript=-318bp_to_AK127925_5end | ||
|cluster_id=chr1:117307157..117307178,+ | |||
|coexpression_cluster_id=C726 | |||
|description=CAGE_peak_2_at_CD2_5end | |description=CAGE_peak_2_at_CD2_5end | ||
|id=chr1:117307157..117307178,+ | |id=chr1:117307157..117307178,+ | ||
|ontology_enrichment_celltype=CL:0000084!2.49e-41!25;CL:0000827!2.49e-41!25;CL:0000791!1.46e-36!18;CL:0000789!1.46e-36!18;CL:0002420!1.46e-36!18;CL:0002419!1.46e-36!18;CL:0000790!1.46e-36!18;CL:0002087!8.26e-28!119;CL:0000738!3.22e-25!140;CL:0000625!1.45e-23!11;CL:0002031!3.91e-22!124;CL:0000838!2.58e-21!52;CL:0000542!9.19e-21!53;CL:0000051!9.19e-21!53;CL:0000037!7.87e-19!172;CL:0000566!7.87e-19!172;CL:0000988!6.93e-18!182;CL:0002032!3.32e-15!165;CL:0000837!3.32e-15!165;CL:0000624!7.27e-13!6;CL:0002057!3.83e-10!42;CL:0000860!3.54e-09!45;CL:0000898!2.04e-07!3;CL:0000842!7.44e-07!3;CL:0000623!7.91e-07!3;CL:0000825!7.91e-07!3;CL:0002194!8.22e-07!63;CL:0000576!8.22e-07!63;CL:0000040!8.22e-07!63;CL:0000559!8.22e-07!63 | |ontology_enrichment_celltype=CL:0000084!2.49e-41!25;CL:0000827!2.49e-41!25;CL:0000791!1.46e-36!18;CL:0000789!1.46e-36!18;CL:0002420!1.46e-36!18;CL:0002419!1.46e-36!18;CL:0000790!1.46e-36!18;CL:0002087!8.26e-28!119;CL:0000738!3.22e-25!140;CL:0000625!1.45e-23!11;CL:0002031!3.91e-22!124;CL:0000838!2.58e-21!52;CL:0000542!9.19e-21!53;CL:0000051!9.19e-21!53;CL:0000037!7.87e-19!172;CL:0000566!7.87e-19!172;CL:0000988!6.93e-18!182;CL:0002032!3.32e-15!165;CL:0000837!3.32e-15!165;CL:0000624!7.27e-13!6;CL:0002057!3.83e-10!42;CL:0000860!3.54e-09!45;CL:0000898!2.04e-07!3;CL:0000842!7.44e-07!3;CL:0000623!7.91e-07!3;CL:0000825!7.91e-07!3;CL:0002194!8.22e-07!63;CL:0000576!8.22e-07!63;CL:0000040!8.22e-07!63;CL:0000559!8.22e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000084;3.88e-59;25!CL:0000791;4.50e-59;18!CL:0000789;4.50e-59;18!CL:0002419;4.50e-59;18!CL:0000625;1.07e-46;11!CL:0000624;4.32e-18;6!CL:0000542;1.61e-17;53!CL:0000898;1.54e-13;3!CL:0000815;1.22e-09;2!CL:0000792;1.22e-09;2!CL:0002677;1.22e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.52e-59,25;CL:0000827,2.52e-59,25;CL:0000791,2.82e-59,18;CL:0000789,2.82e-59,18;CL:0002420,2.82e-59,18;CL:0002419,2.82e-59,18;CL:0000790,2.82e-59,18;CL:0000625,7.71e-47,11;CL:0000838,3.14e-29,52;CL:0000542,1.38e-28,53;CL:0000051,1.38e-28,53;CL:0000624,3.67e-18,6;CL:0000898,1.41e-13,3;CL:0002087,4.22e-13,115;CL:0000738,1.68e-11,136;CL:0002031,4.39e-11,120;CL:0000815,1.22e-09,2;CL:0000792,1.22e-09,2;CL:0002677,1.22e-09,2;CL:0000037,2.35e-08,168;CL:0000988,1.11e-07,177;CL:0002032,4.10e-07,161;CL:0000837,4.10e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;4.50e-59;18!CL:0000051;1.61e-17;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.25e-13!102;UBERON:0003061!1.25e-13!102;UBERON:0002193!1.87e-13!112;UBERON:0000178!7.46e-12!15;UBERON:0000179!7.46e-12!15;UBERON:0000463!7.46e-12!15;UBERON:0002370!6.08e-09!4;UBERON:0005058!6.08e-09!4;UBERON:0009113!6.08e-09!4;UBERON:0003295!6.08e-09!4;UBERON:0005562!6.08e-09!4;UBERON:0004177!3.42e-07!7;UBERON:0001042!8.59e-07!10;UBERON:0009145!8.59e-07!10 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@CD2 | |short_description=p2@CD2 | ||
}} | }} |
Latest revision as of 09:42, 16 September 2015
Short description: | p2@CD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD2_5end |
Coexpression cluster: | C726_chronic_CD4_Hodgkin_CD8_thymus_CD19_blood |
Association with transcript: | -318bp_to_AK127925_5end |
EntrezGene: | CD2 |
HGNC: | 1639 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.52e-59 | 25 |
pro-T cell | 2.52e-59 | 25 |
mature alpha-beta T cell | 2.82e-59 | 18 |
alpha-beta T cell | 2.82e-59 | 18 |
immature T cell | 2.82e-59 | 18 |
mature T cell | 2.82e-59 | 18 |
immature alpha-beta T cell | 2.82e-59 | 18 |
CD8-positive, alpha-beta T cell | 7.71e-47 | 11 |
lymphoid lineage restricted progenitor cell | 3.14e-29 | 52 |
lymphocyte | 1.38e-28 | 53 |
common lymphoid progenitor | 1.38e-28 | 53 |
CD4-positive, alpha-beta T cell | 3.67e-18 | 6 |
naive T cell | 1.41e-13 | 3 |
nongranular leukocyte | 4.22e-13 | 115 |
leukocyte | 1.68e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 4.39e-11 | 120 |
regulatory T cell | 1.22e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.22e-09 | 2 |
naive regulatory T cell | 1.22e-09 | 2 |
hematopoietic stem cell | 2.35e-08 | 168 |
hematopoietic cell | 1.11e-07 | 177 |
hematopoietic oligopotent progenitor cell | 4.10e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.10e-07 | 161 |