FFCP PHASE1:Hg19::chr14:70236906..70236925,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6430 | |EntrezGene=6430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10787 | |HGNC=10787 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-239bp_to_ENST00000556647_5end | |association_with_transcript=-239bp_to_ENST00000556647_5end | ||
|cluster_id=chr14:70236906..70236925,+ | |||
|description=CAGE_peak_3_at_SRSF5_5end | |description=CAGE_peak_3_at_SRSF5_5end | ||
|id=chr14:70236906..70236925,+ | |id=chr14:70236906..70236925,+ | ||
|ontology_enrichment_celltype=CL:0000860!8.41e-15!45;CL:0002057!1.22e-14!42;CL:0000738!1.28e-12!140;CL:0000037!7.20e-12!172;CL:0000566!7.20e-12!172;CL:0002031!1.82e-11!124;CL:0000988!2.15e-11!182;CL:0000766!2.52e-11!76;CL:0002087!3.61e-11!119;CL:0002032!6.93e-11!165;CL:0000837!6.93e-11!165;CL:0000839!3.38e-10!70;CL:0000557!1.05e-09!71;CL:0002194!2.45e-09!63;CL:0000576!2.45e-09!63;CL:0000040!2.45e-09!63;CL:0000559!2.45e-09!63;CL:0002009!2.79e-09!65;CL:0000763!6.62e-09!112;CL:0000049!6.62e-09!112 | |ontology_enrichment_celltype=CL:0000860!8.41e-15!45;CL:0002057!1.22e-14!42;CL:0000738!1.28e-12!140;CL:0000037!7.20e-12!172;CL:0000566!7.20e-12!172;CL:0002031!1.82e-11!124;CL:0000988!2.15e-11!182;CL:0000766!2.52e-11!76;CL:0002087!3.61e-11!119;CL:0002032!6.93e-11!165;CL:0000837!6.93e-11!165;CL:0000839!3.38e-10!70;CL:0000557!1.05e-09!71;CL:0002194!2.45e-09!63;CL:0000576!2.45e-09!63;CL:0000040!2.45e-09!63;CL:0000559!2.45e-09!63;CL:0002009!2.79e-09!65;CL:0000763!6.62e-09!112;CL:0000049!6.62e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-12;33!CL:0002057;1.57e-12;33!CL:0000576;6.89e-08;48!CL:0000473;1.02e-07;39!CL:0000234;1.02e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.70e-15,42;CL:0002057,7.70e-15,42;CL:0000738,1.91e-12,136;CL:0000037,1.86e-11,168;CL:0000473,2.46e-11,48;CL:0000234,2.46e-11,48;CL:0002031,2.48e-11,120;CL:0000766,3.23e-11,72;CL:0002087,4.55e-11,115;CL:0000988,5.92e-11,177;CL:0002032,1.78e-10,161;CL:0000837,1.78e-10,161;CL:0000839,4.48e-10,66;CL:0000557,1.24e-09,67;CL:0002194,3.30e-09,59;CL:0000576,3.30e-09,59;CL:0000040,3.30e-09,59;CL:0000559,3.30e-09,59;CL:0002009,4.22e-09,61;CL:0000763,2.01e-08,108;CL:0000049,2.01e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.07e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.43e-10!102;UBERON:0003061!1.43e-10!102;UBERON:0002193!1.65e-08!112;UBERON:0001474!6.01e-08!86;UBERON:0002371!6.59e-08!80;UBERON:0001049!2.08e-07!57;UBERON:0005068!2.08e-07!57;UBERON:0006241!2.08e-07!57;UBERON:0007135!2.08e-07!57;UBERON:0007023!3.71e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!1.43e-10!102;UBERON:0003061!1.43e-10!102;UBERON:0002193!1.65e-08!112;UBERON:0001474!6.01e-08!86;UBERON:0002371!6.59e-08!80;UBERON:0001049!2.08e-07!57;UBERON:0005068!2.08e-07!57;UBERON:0006241!2.08e-07!57;UBERON:0007135!2.08e-07!57;UBERON:0007023!3.71e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.20e-10,98;UBERON:0003061,1.20e-10,98;UBERON:0002193,1.79e-08,108;UBERON:0001474,6.39e-08,82;UBERON:0002371,6.86e-08,76;UBERON:0001049,1.29e-07,56;UBERON:0005068,1.29e-07,56;UBERON:0006241,1.29e-07,56;UBERON:0007135,1.29e-07,56;UBERON:0000073,1.40e-07,53;UBERON:0002616,1.40e-07,53 | |||
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| ||
|short_description=p3@SRSF5 | |short_description=p3@SRSF5 | ||
}} | }} |
Latest revision as of 19:45, 15 September 2015
Short description: | p3@SRSF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SRSF5_5end |
Coexpression cluster: | NA |
Association with transcript: | -239bp_to_ENST00000556647_5end |
EntrezGene: | SRSF5 |
HGNC: | 10787 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.70e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.70e-15 | 42 |
leukocyte | 1.91e-12 | 136 |
hematopoietic stem cell | 1.86e-11 | 168 |
defensive cell | 2.46e-11 | 48 |
phagocyte | 2.46e-11 | 48 |
hematopoietic lineage restricted progenitor cell | 2.48e-11 | 120 |
myeloid leukocyte | 3.23e-11 | 72 |
nongranular leukocyte | 4.55e-11 | 115 |
hematopoietic cell | 5.92e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.78e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-10 | 161 |
myeloid lineage restricted progenitor cell | 4.48e-10 | 66 |
granulocyte monocyte progenitor cell | 1.24e-09 | 67 |
monopoietic cell | 3.30e-09 | 59 |
monocyte | 3.30e-09 | 59 |
monoblast | 3.30e-09 | 59 |
promonocyte | 3.30e-09 | 59 |
macrophage dendritic cell progenitor | 4.22e-09 | 61 |
myeloid cell | 2.01e-08 | 108 |
common myeloid progenitor | 2.01e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.20e-10 | 98 |
blood island | 1.20e-10 | 98 |
hemolymphoid system | 1.79e-08 | 108 |
bone element | 6.39e-08 | 82 |
bone marrow | 6.86e-08 | 76 |
neural tube | 1.29e-07 | 56 |
neural rod | 1.29e-07 | 56 |
future spinal cord | 1.29e-07 | 56 |
neural keel | 1.29e-07 | 56 |
regional part of nervous system | 1.40e-07 | 53 |
regional part of brain | 1.40e-07 | 53 |