FFCP PHASE1:Hg19::chr1:110198920..110198942,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2948 | |EntrezGene=2948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4636 | |HGNC=4636 | ||
|TSSclassifier=strong | |||
|UniProt=A6NNT0 | |UniProt=A6NNT0 | ||
|association_with_transcript=-15bp_to_ENST00000369833_5end | |association_with_transcript=-15bp_to_ENST00000369833_5end | ||
|cluster_id=chr1:110198920..110198942,+ | |||
|coexpression_cluster_id=C3846 | |||
|description=CAGE_peak_3_at_GSTM4_5end | |description=CAGE_peak_3_at_GSTM4_5end | ||
|id=chr1:110198920..110198942,+ | |id=chr1:110198920..110198942,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.04e-20!115;UBERON:0005743!5.40e-18!86;UBERON:0001017!9.86e-17!82;UBERON:0000073!8.52e-16!94;UBERON:0001016!8.52e-16!94;UBERON:0000955!1.01e-15!69;UBERON:0006238!1.01e-15!69;UBERON:0001049!1.47e-15!57;UBERON:0005068!1.47e-15!57;UBERON:0006241!1.47e-15!57;UBERON:0007135!1.47e-15!57;UBERON:0002616!4.93e-15!59;UBERON:0000481!3.74e-14!347;UBERON:0000062!3.95e-14!511;UBERON:0003075!3.98e-14!86;UBERON:0007284!3.98e-14!86;UBERON:0002346!1.34e-13!90;UBERON:0000033!2.18e-11!123;UBERON:0000468!6.31e-11!659;UBERON:0000153!8.66e-11!129;UBERON:0007811!8.66e-11!129;UBERON:0002780!1.08e-10!41;UBERON:0001890!1.08e-10!41;UBERON:0006240!1.08e-10!41;UBERON:0004121!1.36e-10!169;UBERON:0000924!2.07e-10!173;UBERON:0006601!2.07e-10!173;UBERON:0003080!3.05e-10!42;UBERON:0000475!4.27e-10!365;UBERON:0001893!1.01e-09!34;UBERON:0003056!2.66e-09!61;UBERON:0002791!2.83e-09!33;UBERON:0002020!4.28e-09!34;UBERON:0003528!4.28e-09!34;UBERON:0001869!7.06e-09!32;UBERON:0000922!2.04e-08!612;UBERON:0000477!4.07e-08!286;UBERON:0000467!7.13e-08!625;UBERON:0000480!7.61e-08!626;UBERON:0000064!7.61e-08!219;UBERON:0000923!5.69e-07!604;UBERON:0005291!5.69e-07!604;UBERON:0006598!5.69e-07!604;UBERON:0002532!5.69e-07!604;UBERON:0002050!5.98e-07!605;UBERON:0005423!5.98e-07!605;UBERON:0003076!6.96e-07!15;UBERON:0003057!6.96e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.29e-09;53!UBERON:0002616;1.29e-09;53!UBERON:0001893;7.53e-09;34!UBERON:0002791;3.13e-08;32!UBERON:0001869;3.91e-08;32!UBERON:0003528;4.59e-08;34!UBERON:0002020;4.59e-08;34!UBERON:0002780;5.29e-08;41!UBERON:0001890;5.29e-08;41!UBERON:0001017;1.63e-07;75!UBERON:0000955;2.29e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.73e-20,114;UBERON:0011216,1.41e-18,223;UBERON:0001017,8.29e-18,81;UBERON:0001049,7.36e-17,56;UBERON:0005068,7.36e-17,56;UBERON:0006241,7.36e-17,56;UBERON:0007135,7.36e-17,56;UBERON:0000955,8.37e-17,68;UBERON:0006238,8.37e-17,68;UBERON:0000073,7.58e-16,53;UBERON:0002616,7.58e-16,53;UBERON:0001016,1.38e-15,89;UBERON:0003075,6.69e-14,82;UBERON:0007284,6.69e-14,82;UBERON:0002346,2.35e-13,86;UBERON:0010314,8.30e-12,132;UBERON:0004121,3.02e-11,171;UBERON:0000924,3.02e-11,171;UBERON:0006601,3.02e-11,171;UBERON:0002780,3.56e-11,41;UBERON:0001890,3.56e-11,41;UBERON:0003080,3.56e-11,41;UBERON:0006240,3.56e-11,41;UBERON:0001893,3.81e-10,34;UBERON:0010371,4.87e-10,104;UBERON:0003056,6.26e-10,61;UBERON:0003528,1.75e-09,34;UBERON:0002020,1.75e-09,34;UBERON:0001869,2.97e-09,32;UBERON:0002791,3.18e-09,32;UBERON:0000922,2.14e-07,592;UBERON:0003076,3.35e-07,15;UBERON:0003057,3.35e-07,15 | |||
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| ||
|short_description=p3@GSTM4 | |short_description=p3@GSTM4 | ||
}} | }} |
Latest revision as of 22:40, 15 September 2015
Short description: | p3@GSTM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GSTM4_5end |
Coexpression cluster: | C3846_astrocytoma_alveolar_mesothelioma_small_mucinous_Pericytes_Mesenchymal |
Association with transcript: | -15bp_to_ENST00000369833_5end |
EntrezGene: | GSTM4 |
HGNC: | 4636 |
UniProt: | A6NNT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.73e-20 | 114 |
organ system subdivision | 1.41e-18 | 223 |
central nervous system | 8.29e-18 | 81 |
neural tube | 7.36e-17 | 56 |
neural rod | 7.36e-17 | 56 |
future spinal cord | 7.36e-17 | 56 |
neural keel | 7.36e-17 | 56 |
brain | 8.37e-17 | 68 |
future brain | 8.37e-17 | 68 |
regional part of nervous system | 7.58e-16 | 53 |
regional part of brain | 7.58e-16 | 53 |
nervous system | 1.38e-15 | 89 |
neural plate | 6.69e-14 | 82 |
presumptive neural plate | 6.69e-14 | 82 |
neurectoderm | 2.35e-13 | 86 |
structure with developmental contribution from neural crest | 8.30e-12 | 132 |
ectoderm-derived structure | 3.02e-11 | 171 |
ectoderm | 3.02e-11 | 171 |
presumptive ectoderm | 3.02e-11 | 171 |
regional part of forebrain | 3.56e-11 | 41 |
forebrain | 3.56e-11 | 41 |
anterior neural tube | 3.56e-11 | 41 |
future forebrain | 3.56e-11 | 41 |
telencephalon | 3.81e-10 | 34 |
ecto-epithelium | 4.87e-10 | 104 |
pre-chordal neural plate | 6.26e-10 | 61 |
brain grey matter | 1.75e-09 | 34 |
gray matter | 1.75e-09 | 34 |
cerebral hemisphere | 2.97e-09 | 32 |
regional part of telencephalon | 3.18e-09 | 32 |
embryo | 2.14e-07 | 592 |
posterior neural tube | 3.35e-07 | 15 |
chordal neural plate | 3.35e-07 | 15 |