FFCP PHASE1:Hg19::chr14:69445968..69445984,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=87 | |EntrezGene=87 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=163 | |HGNC=163 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000438964_5end | |association_with_transcript=0bp_to_ENST00000438964_5end | ||
|cluster_id=chr14:69445968..69445984,- | |||
|coexpression_cluster_id=C2309 | |||
|description=CAGE_peak_2_at_ACTN1_5end | |description=CAGE_peak_2_at_ACTN1_5end | ||
|id=chr14:69445968..69445984,- | |id=chr14:69445968..69445984,- | ||
|ontology_enrichment_celltype=CL:0000220!1.39e-17!246;CL:0002321!1.56e-17!248;CL:0000055!9.01e-16!180;CL:0000222!4.57e-13!119;CL:0000144!2.02e-11!625;CL:0000548!3.59e-11!679;CL:0000004!3.59e-11!679;CL:0000255!3.59e-11!679;CL:0002371!1.48e-10!591;CL:0000012!2.50e-10!682;CL:0000192!4.34e-10!42;CL:0000514!4.34e-10!42;CL:0000183!6.34e-09!59;CL:0000680!7.58e-09!57;CL:0000056!7.58e-09!57;CL:0000355!7.58e-09!57;CL:0000187!1.12e-08!54;CL:0000359!1.35e-08!32;CL:0000057!5.36e-08!75;CL:0000066!1.17e-07!254;CL:0000393!4.88e-07!60;CL:0000211!4.88e-07!60 | |ontology_enrichment_celltype=CL:0000220!1.39e-17!246;CL:0002321!1.56e-17!248;CL:0000055!9.01e-16!180;CL:0000222!4.57e-13!119;CL:0000144!2.02e-11!625;CL:0000548!3.59e-11!679;CL:0000004!3.59e-11!679;CL:0000255!3.59e-11!679;CL:0002371!1.48e-10!591;CL:0000012!2.50e-10!682;CL:0000192!4.34e-10!42;CL:0000514!4.34e-10!42;CL:0000183!6.34e-09!59;CL:0000680!7.58e-09!57;CL:0000056!7.58e-09!57;CL:0000355!7.58e-09!57;CL:0000187!1.12e-08!54;CL:0000359!1.35e-08!32;CL:0000057!5.36e-08!75;CL:0000066!1.17e-07!254;CL:0000393!4.88e-07!60;CL:0000211!4.88e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.01e-08;32!CL:0000192;1.57e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.19e-17,250;CL:0000222,4.00e-13,121;CL:0000192,2.85e-10,43;CL:0000514,2.85e-10,43;CL:0000680,4.99e-09,58;CL:0000056,4.99e-09,58;CL:0000355,4.99e-09,58;CL:0000187,7.35e-09,55;CL:0000359,1.35e-08,32;CL:0000057,2.02e-08,76;CL:0000066,1.59e-07,253;CL:0000393,3.29e-07,61;CL:0000211,3.29e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.57e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.48e-15!659;UBERON:0005256!4.66e-15!143;UBERON:0002049!5.40e-15!79;UBERON:0007798!5.40e-15!79;UBERON:0003914!1.67e-14!118;UBERON:0000467!3.87e-14!625;UBERON:0000480!9.15e-14!626;UBERON:0002100!3.36e-12!216;UBERON:0004535!6.68e-12!110;UBERON:0001009!1.99e-11!113;UBERON:0001981!3.11e-11!60;UBERON:0007500!3.11e-11!60;UBERON:0004537!3.11e-11!60;UBERON:0006965!3.11e-11!60;UBERON:0000055!7.45e-11!69;UBERON:0000490!3.24e-10!138;UBERON:0000926!3.47e-10!448;UBERON:0004120!3.47e-10!448;UBERON:0006603!3.47e-10!448;UBERON:0004872!6.05e-10!84;UBERON:0002050!8.01e-10!605;UBERON:0005423!8.01e-10!605;UBERON:0000923!9.71e-10!604;UBERON:0005291!9.71e-10!604;UBERON:0006598!9.71e-10!604;UBERON:0002532!9.71e-10!604;UBERON:0000922!1.28e-09!612;UBERON:0001637!1.97e-09!42;UBERON:0003509!1.97e-09!42;UBERON:0004572!1.97e-09!42;UBERON:0000475!4.54e-09!365;UBERON:0000486!1.23e-08!82;UBERON:0000914!1.30e-08!83;UBERON:0002329!1.30e-08!83;UBERON:0003077!1.30e-08!83;UBERON:0003059!1.30e-08!83;UBERON:0007282!1.30e-08!83;UBERON:0009618!1.30e-08!83;UBERON:0007285!1.30e-08!83;UBERON:0003104!1.56e-08!238;UBERON:0009142!1.56e-08!238;UBERON:0000119!2.03e-08!312;UBERON:0000483!5.55e-08!309;UBERON:0003102!7.47e-08!95;UBERON:0004290!1.19e-07!70;UBERON:0005085!1.22e-07!29;UBERON:0002385!1.54e-07!63;UBERON:0001015!1.54e-07!63;UBERON:0000383!1.54e-07!63;UBERON:0001134!2.52e-07!61;UBERON:0002036!2.52e-07!61;UBERON:0003082!2.52e-07!61;UBERON:0000481!2.64e-07!347;UBERON:0004573!3.34e-07!33;UBERON:0004571!3.34e-07!33;UBERON:0003064!7.91e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.20e-07;42!UBERON:0003509;2.20e-07;42!UBERON:0004572;2.20e-07;42 | |||
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| ||
|short_description=p2@ACTN1 | |short_description=p2@ACTN1 | ||
}} | }} |
Latest revision as of 07:30, 25 September 2015
Short description: | p2@ACTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACTN1_5end |
Coexpression cluster: | C2309_hepatic_Fibroblast_Hepatic_Smooth_Urothelial_aorta_Olfactory |
Association with transcript: | 0bp_to_ENST00000438964_5end |
EntrezGene: | ACTN1 |
HGNC: | 163 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.19e-17 | 250 |
mesodermal cell | 4.00e-13 | 121 |
smooth muscle cell | 2.85e-10 | 43 |
smooth muscle myoblast | 2.85e-10 | 43 |
muscle precursor cell | 4.99e-09 | 58 |
myoblast | 4.99e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.99e-09 | 58 |
muscle cell | 7.35e-09 | 55 |
vascular associated smooth muscle cell | 1.35e-08 | 32 |
fibroblast | 2.02e-08 | 76 |
epithelial cell | 1.59e-07 | 253 |
electrically responsive cell | 3.29e-07 | 61 |
electrically active cell | 3.29e-07 | 61 |