FFCP PHASE1:Hg19::chr1:109932519..109932543,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6272 | |EntrezGene=6272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11186 | |HGNC=11186 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000493736_5end | |association_with_transcript=0bp_to_ENST00000493736_5end | ||
|cluster_id=chr1:109932519..109932543,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_5_at_SORT1_5end | |description=CAGE_peak_5_at_SORT1_5end | ||
|id=chr1:109932519..109932543,- | |id=chr1:109932519..109932543,- | ||
|ontology_enrichment_celltype=CL:0000763!5.46e-39!112;CL:0000049!5.46e-39!112;CL:0000766!4.42e-26!76;CL:0002057!1.51e-25!42;CL:0000557!4.19e-25!71;CL:0002009!1.41e-24!65;CL:0000839!7.54e-24!70;CL:0002032!7.61e-24!165;CL:0000837!7.61e-24!165;CL:0002194!8.20e-24!63;CL:0000576!8.20e-24!63;CL:0000040!8.20e-24!63;CL:0000559!8.20e-24!63;CL:0000860!2.55e-23!45;CL:0000037!3.07e-22!172;CL:0000566!3.07e-22!172;CL:0000988!3.62e-20!182;CL:0000738!7.08e-13!140;CL:0002031!4.68e-12!124;CL:0002087!3.31e-10!119;CL:0000134!3.08e-07!358;CL:0002320!8.05e-07!365 | |ontology_enrichment_celltype=CL:0000763!5.46e-39!112;CL:0000049!5.46e-39!112;CL:0000766!4.42e-26!76;CL:0002057!1.51e-25!42;CL:0000557!4.19e-25!71;CL:0002009!1.41e-24!65;CL:0000839!7.54e-24!70;CL:0002032!7.61e-24!165;CL:0000837!7.61e-24!165;CL:0002194!8.20e-24!63;CL:0000576!8.20e-24!63;CL:0000040!8.20e-24!63;CL:0000559!8.20e-24!63;CL:0000860!2.55e-23!45;CL:0000037!3.07e-22!172;CL:0000566!3.07e-22!172;CL:0000988!3.62e-20!182;CL:0000738!7.08e-13!140;CL:0002031!4.68e-12!124;CL:0002087!3.31e-10!119;CL:0000134!3.08e-07!358;CL:0002320!8.05e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-37;33!CL:0002057;1.06e-37;33!CL:0000473;5.11e-31;39!CL:0000234;5.11e-31;39!CL:0000576;1.59e-17;48!CL:0000763;7.38e-15;100!CL:0000766;3.97e-11;69!CL:0000840;3.76e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.14e-45,108;CL:0000049,2.14e-45,108;CL:0002194,1.32e-34,59;CL:0000576,1.32e-34,59;CL:0000040,1.32e-34,59;CL:0000559,1.32e-34,59;CL:0000839,6.55e-34,66;CL:0002009,2.38e-33,61;CL:0000557,2.40e-33,67;CL:0000860,1.89e-32,42;CL:0002057,1.89e-32,42;CL:0000473,1.34e-31,48;CL:0000234,1.34e-31,48;CL:0002032,8.93e-31,161;CL:0000837,8.93e-31,161;CL:0000766,9.40e-31,72;CL:0000037,2.95e-29,168;CL:0000988,1.77e-27,177;CL:0002031,1.39e-18,120;CL:0002087,1.29e-17,115;CL:0000738,7.26e-16,136;CL:0000134,8.88e-13,354;CL:0002320,2.07e-12,361;CL:0000219,4.12e-11,386;CL:0000048,1.61e-09,427;CL:0000723,2.67e-09,433;CL:0000840,3.41e-09,5;CL:0001029,3.41e-09,5;CL:0000034,5.13e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-22;42!CL:0000049;2.72e-15;108 | |||
|ontology_enrichment_disease=DOID:1036!4.14e-13!8;DOID:8692!8.00e-12!31;DOID:1240!1.36e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.87e-26;8!DOID:8692;5.22e-16;31!DOID:1240;1.96e-11;39!DOID:2531;2.64e-07;51!DOID:0060083;2.64e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.20e-26,8;DOID:8692,1.07e-16,31;DOID:1240,6.59e-13,39;DOID:2531,1.86e-09,51;DOID:0060083,1.86e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.75e-21!80;UBERON:0001474!5.50e-19!86;UBERON:0002390!7.79e-17!102;UBERON:0003061!7.79e-17!102;UBERON:0004765!8.79e-16!101;UBERON:0001434!8.79e-16!101;UBERON:0002193!1.99e-14!112;UBERON:0002405!1.16e-12!115;UBERON:0002204!7.23e-09!167;UBERON:0007023!9.83e-08!115;UBERON:0002020!4.19e-07!34;UBERON:0003528!4.19e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.38e-29,76;UBERON:0001474,1.66e-26,82;UBERON:0002390,8.71e-24,98;UBERON:0003061,8.71e-24,98;UBERON:0004765,8.87e-24,90;UBERON:0002405,7.09e-23,93;UBERON:0002193,3.57e-21,108;UBERON:0001434,5.60e-21,100;UBERON:0002384,6.59e-12,371;UBERON:0002204,7.93e-11,167;UBERON:0003081,3.80e-09,203 | |||
|phase1_expression=0,1.2846031433459,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0.242584061187816,0,0,0.309706370895104,20.7138522471948,19.7243744027408,33.1075121844019,1.72372840368309,3.22742341791913,2.70852973188684,0.188242339542605,0,0,3.97909060082173,4.17207735198922,6.39337125799041,8.57613380485462,18.1511928435685,16.6227652707751,0,0,0.622822248995575,17.587406567972,21.3807996552283,28.01736096696,0,1.47311054395026,0.949387162322653,0.211255286311942,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,2.92092654289215,4.70150290708022,3.72282289452822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17002132569619,0.743155811443641,0,0,0,0,0,0,4.43396914106349,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,1.68478306868075,0,0,0,0.169291777801603,1.4452926759333,0,0,1.03051603426729,0,0,0,0,0,0,3.51592382018778,0.33307196799782,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,4.39544717906069,0.166211681900156,11.0541873702419,15.6850027454192,19.1316609152461,9.67744036893344,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46277562248017,0,0,0,0,0.258565912723101,0,0,0,0,0,0.828478110694391,0,0,0,0,1.08803560673895,0,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0.319267718114302,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 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|phase1_expression=0,1.2846031433459,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0.242584061187816,0,0,0.309706370895104,20.7138522471948,19.7243744027408,33.1075121844019,1.72372840368309,3.22742341791913,2.70852973188684,0.188242339542605,0,0,3.97909060082173,4.17207735198922,6.39337125799041,8.57613380485462,18.1511928435685,16.6227652707751,0,0,0.622822248995575,17.587406567972,21.3807996552283,28.01736096696,0,1.47311054395026,0.949387162322653,0.211255286311942,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,2.92092654289215,4.70150290708022,3.72282289452822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17002132569619,0.743155811443641,0,0,0,0,0,0,4.43396914106349,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,1.68478306868075,0,0,0,0.169291777801603,1.4452926759333,0,0,1.03051603426729,0,0,0,0,0,0,3.51592382018778,0.33307196799782,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,4.39544717906069,0.166211681900156,11.0541873702419,15.6850027454192,19.1316609152461,9.67744036893344,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46277562248017,0,0,0,0,0.258565912723101,0,0,0,0,0,0.828478110694391,0,0,0,0,1.08803560673895,0,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0.319267718114302,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p5@SORT1 | |short_description=p5@SORT1 | ||
}} | }} |
Latest revision as of 21:36, 15 September 2015
Short description: | p5@SORT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SORT1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000493736_5end |
EntrezGene: | SORT1 |
HGNC: | 11186 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.14e-45 | 108 |
common myeloid progenitor | 2.14e-45 | 108 |
monopoietic cell | 1.32e-34 | 59 |
monocyte | 1.32e-34 | 59 |
monoblast | 1.32e-34 | 59 |
promonocyte | 1.32e-34 | 59 |
myeloid lineage restricted progenitor cell | 6.55e-34 | 66 |
macrophage dendritic cell progenitor | 2.38e-33 | 61 |
granulocyte monocyte progenitor cell | 2.40e-33 | 67 |
classical monocyte | 1.89e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.89e-32 | 42 |
defensive cell | 1.34e-31 | 48 |
phagocyte | 1.34e-31 | 48 |
hematopoietic oligopotent progenitor cell | 8.93e-31 | 161 |
hematopoietic multipotent progenitor cell | 8.93e-31 | 161 |
myeloid leukocyte | 9.40e-31 | 72 |
hematopoietic stem cell | 2.95e-29 | 168 |
hematopoietic cell | 1.77e-27 | 177 |
hematopoietic lineage restricted progenitor cell | 1.39e-18 | 120 |
nongranular leukocyte | 1.29e-17 | 115 |
leukocyte | 7.26e-16 | 136 |
mesenchymal cell | 8.88e-13 | 354 |
connective tissue cell | 2.07e-12 | 361 |
motile cell | 4.12e-11 | 386 |
multi fate stem cell | 1.61e-09 | 427 |
somatic stem cell | 2.67e-09 | 433 |
immature conventional dendritic cell | 3.41e-09 | 5 |
common dendritic progenitor | 3.41e-09 | 5 |
stem cell | 5.13e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.38e-29 | 76 |
bone element | 1.66e-26 | 82 |
hematopoietic system | 8.71e-24 | 98 |
blood island | 8.71e-24 | 98 |
skeletal element | 8.87e-24 | 90 |
immune system | 7.09e-23 | 93 |
hemolymphoid system | 3.57e-21 | 108 |
skeletal system | 5.60e-21 | 100 |
connective tissue | 6.59e-12 | 371 |
musculoskeletal system | 7.93e-11 | 167 |
lateral plate mesoderm | 3.80e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.20e-26 | 8 |
myeloid leukemia | 1.07e-16 | 31 |
leukemia | 6.59e-13 | 39 |
hematologic cancer | 1.86e-09 | 51 |
immune system cancer | 1.86e-09 | 51 |