FFCP PHASE1:Hg19::chr1:107736282..107736318,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:107736282..107736318,+ | |||
|description=CAGE_peak_at_chr1:107736282..107736318,+ | |description=CAGE_peak_at_chr1:107736282..107736318,+ | ||
|id=chr1:107736282..107736318,+ | |id=chr1:107736282..107736318,+ | ||
|ontology_enrichment_celltype=CL:0002620!6.00e-08!23;CL:0002573!4.97e-07!2 | |ontology_enrichment_celltype=CL:0002620!6.00e-08!23;CL:0002573!4.97e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.70e-32;5!CL:0002321;1.34e-11;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!2.76e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;3.88e-36;10!DOID:169;2.72e-27;6!DOID:3193;5.69e-21;2!DOID:962;5.69e-21;2!DOID:3095;5.72e-17;22!DOID:2994;5.72e-17;22!DOID:1192;1.83e-14;3!DOID:1115;6.42e-09;20 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.88e-36,10;DOID:169,3.11e-27,6;DOID:3193,6.96e-21,2;DOID:962,6.96e-21,2;DOID:3095,5.72e-17,22;DOID:2994,5.72e-17,22;DOID:1192,2.09e-14,3;DOID:1115,6.69e-09,20;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.12e-17!94;UBERON:0001016!1.12e-17!94;UBERON:0001049!2.14e-17!57;UBERON:0005068!2.14e-17!57;UBERON:0006241!2.14e-17!57;UBERON:0007135!2.14e-17!57;UBERON:0002346!4.32e-14!90;UBERON:0002780!5.81e-14!41;UBERON:0001890!5.81e-14!41;UBERON:0006240!5.81e-14!41;UBERON:0002616!9.99e-14!59;UBERON:0003080!1.67e-13!42;UBERON:0001017!8.81e-13!82;UBERON:0002020!9.08e-13!34;UBERON:0003528!9.08e-13!34;UBERON:0005743!9.71e-13!86;UBERON:0001893!1.52e-12!34;UBERON:0001869!5.21e-12!32;UBERON:0003075!1.02e-11!86;UBERON:0007284!1.02e-11!86;UBERON:0002791!1.24e-11!33;UBERON:0000955!1.31e-11!69;UBERON:0006238!1.31e-11!69;UBERON:0000924!3.56e-10!173;UBERON:0006601!3.56e-10!173;UBERON:0000956!1.50e-09!25;UBERON:0000203!1.50e-09!25;UBERON:0003056!1.81e-09!61;UBERON:0004121!1.56e-08!169;UBERON:0000010!3.07e-08!8;UBERON:0002420!5.67e-07!9;UBERON:0007245!5.67e-07!9;UBERON:0010009!5.67e-07!9;UBERON:0010011!5.67e-07!9;UBERON:0000454!5.67e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.70e-32;5!UBERON:0002410;1.70e-32;5!UBERON:0003714;5.69e-21;2!UBERON:0000010;1.35e-18;8!UBERON:0002346;3.42e-11;4!UBERON:0000923;3.42e-11;4!UBERON:0010316;3.42e-11;4!UBERON:0005291;3.42e-11;4!UBERON:0002050;3.22e-09;5!UBERON:0005423;3.22e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.99e-32,5;UBERON:0002410,1.99e-32,5;UBERON:0003714,6.96e-21,2;UBERON:0000010,1.48e-18,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.958120975510189,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0.717558542755448,0,0,0,0,0.257640540045629,0,0.675105328965065,0,0.757301322732344,0.0920498986422993,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.214840489736547,0,0.170453254832202,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0.333926115068718,0,3.80025734630388,0,0.276283915531148,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868124974666461,0,0.241192877250816,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.110929051536852,0,0,0.249960815924213,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0,0,0,0,0,0.736423801007363,0.139879507719444,0,0,0,2.04445724412665,0.436838552768056,0.169732529954025,0,1.98297222814403,1.11728983594649,0.318004350653419,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0.690359926060101,0,0,1.21023041222112,0,0,0.163771917510097,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,0.527613733078862,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.591660003652827,0.426067023795788,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,0.0918948995348449,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr1:107736282..107736318,+ | |short_description=p@chr1:107736282..107736318,+ | ||
}} | }} |
Latest revision as of 19:10, 27 July 2015
Short description: | p@chr1:107736282..107736318, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:107736282..107736318, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.99e-32 | 5 |
autonomic nervous system | 1.99e-32 | 5 |
neural tissue | 6.96e-21 | 2 |
peripheral nervous system | 1.48e-18 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.88e-36 | 10 |
neuroendocrine tumor | 3.11e-27 | 6 |
peripheral nerve sheath neoplasm | 6.96e-21 | 2 |
neurofibroma | 6.96e-21 | 2 |
germ cell and embryonal cancer | 5.72e-17 | 22 |
germ cell cancer | 5.72e-17 | 22 |
peripheral nervous system neoplasm | 2.09e-14 | 3 |
sarcoma | 6.69e-09 | 20 |
cell type cancer | 1.55e-07 | 143 |