FFCP PHASE1:Hg19::chr1:104068633..104068645,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55599 | |EntrezGene=55599 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18666 | |HGNC=18666 | ||
|TSSclassifier=strong | |||
|UniProt=Q96LT9 | |UniProt=Q96LT9 | ||
|association_with_transcript=55bp_to_ENST00000423855,NM_017619,uc010oul.1,uc010oum.1,uc010oun.1_5end | |association_with_transcript=55bp_to_ENST00000423855,NM_017619,uc010oul.1,uc010oum.1,uc010oun.1_5end | ||
|cluster_id=chr1:104068633..104068645,+ | |||
|description=CAGE_peak_4_at_RNPC3_5end | |description=CAGE_peak_4_at_RNPC3_5end | ||
|id=chr1:104068633..104068645,+ | |id=chr1:104068633..104068645,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002619;3.51e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,3.37e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.08e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.35e-16;6!UBERON:0003293;1.35e-16;6!UBERON:0003294;1.35e-16;6!UBERON:0010047;1.35e-16;6!UBERON:0003408;1.35e-16;6!UBERON:0000167;1.35e-16;6!UBERON:0001829;6.39e-09;2!UBERON:0001905;2.06e-08;2!UBERON:0002757;2.06e-08;2!UBERON:0010134;2.06e-08;2!UBERON:0005408;2.06e-08;2!UBERON:0001899;2.06e-08;2!UBERON:0001041;6.64e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.34e-16,6;UBERON:0003293,1.34e-16,6;UBERON:0003294,1.34e-16,6;UBERON:0010047,1.34e-16,6;UBERON:0000167,1.34e-16,6;UBERON:0003408,8.06e-10,10;UBERON:0001829,3.12e-09,2;UBERON:0001905,7.04e-08,2;UBERON:0002757,7.04e-08,2;UBERON:0010134,7.04e-08,2;UBERON:0005408,7.04e-08,2;UBERON:0001899,7.04e-08,2 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0,0.684372125364421,0.251085279189606,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0.6024118375565,0,0.387336002901508,0.426507697462265,0,1.10799081706375,0.200544447470142,0,1.11957737119962,1.29557466407592,2.83333124397605,0,0,0.727752183563449,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.612167784741805,0,0.639337125799041,0.659702600373432,0,0,0,0.56738522469114,0,0.75374599577023,1.0429658368404,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.22465726229299,0.150176892841506,0.48217676009124,0,0.79566670879636,0.365328307529268,0,0,0.889509253863555,0,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,0,0,0.263384084775077,1.180258620683,1.57204305099666,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0.443067789167242,1.35401931882508,0.384273959177026,0.390178042679635,0.164437904603676,0,0,0.741432815810302,0.267540828089713,1.04535523804977,0,0,0.34362744548263,1.01207876807801,0,0,0,0.301150238155546,0.511946444617674,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0.189069634328136,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0.522389211897802,0.132957960518865,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0,0.33472061276467,0,0,0,1.10298924103761,0,0.446498641420399,0.22452937262617,0,1.53316637465883,0,0,0,0,0,0,0.25326102332916,1.32409180813219,0.286836620748814,0.709336764396714,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0.323745888736263,0.421352420106746,0,0.368502951935304,0,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0,0,0.150238058906597,0.113432183160021,0.89694817844431,0,0.635795703478686,0.300091096084402,0.206105058476878,0.772921620136887,0,0.337552664482532,0.0974370051611986,0.757301322732344,0.276149695926898,0.161646056818812,0,0.201504196455281,0,0.57978255948989,0.818238361772504,0.573609190778008,0,0.265059536642971,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,0,0,1.44375896333917,0.354920400119532,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,0.491953754172454,0,0.548751427043128,0,0.100528972411631,0,0,0,0,0.463721619900307,0,0.144366447761074,0,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0.16798212819886,0.425325291727159,0.0895585227028483,0,0,4.43396914106349,0.088048434013226,0,0.144119953416961,0.6312121671319,0.380987365753014,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0,0,0.215627574859517,0.256686072559497,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0.828831026872071,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0,2.27407504055985,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0.213455115606889,0.303127571446259,0,0,0.496215615637554,0.767309866440312,0.280660094433074,0,0,0.321707842287215,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0.184161977871793,0,0,0.262248829918848,0,0.15403067420883,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0.915694648183434,0.577566499444116,0,0,0,0,0.154048617114644,0.15350367472613,0,0.322260734604821,0,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,3.06270509987002,0.30347334256665,0,0,0,0.308033580176089,0,0,0.55597265731176,0,0,0.632758849437452,0.190630193923825,0,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0.709522128141196,0,0.329294892959902,0,0.349934720244983,0.192444225451024,0,0,0.564862804660675,0,0,0,0.459446800413919,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0.648473311192717,0,0.79312517629427,2.35012956480441,0,0,0,0.28853842595289,0.569134746787313,0.318852545457645,0.399158742865633,0.191505370132367,0.211673582723883,0,0.561594356226918,0,0,0,0.338583555603207,0,0,0,0.343505344755765,0,0,0.333698283423817,0.19538809540204,0,0,0,0,0,0.18714054040822,0.439524537815682,0.242721043499027,0,0,0.23874448473769,0,0,0.994147647766298,0.281338832821026,0.333926115068718,0,0.422250816255987,0.398495976502139,0,0,0.920418142519393,0.123084805461069,0.311039587661807,0.449341755736634,0.179021174675609,0,0.295930216910801,0,1.11136990144637,0,0.371072392647405,0,0,0.262379999988587,0,0,0.762760950878299,0,0,0,0.173624994933292,0,1.20596438625408,0,0.552896299656123,0,0,0.32681539055697,0,0.923403102045565,0,0.23056390438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| ||
|short_description=p4@RNPC3 | |short_description=p4@RNPC3 | ||
}} | }} |
Latest revision as of 06:37, 25 September 2015
Short description: | p4@RNPC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNPC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_ENST00000423855, NM_017619, uc010oul.1, uc010oum.1, uc010oun.1_5end |
EntrezGene: | RNPC3 |
HGNC: | 18666 |
UniProt: | Q96LT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 3.37e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.34e-16 | 6 |
gland of oral region | 1.34e-16 | 6 |
gland of foregut | 1.34e-16 | 6 |
oral gland | 1.34e-16 | 6 |
oral cavity | 1.34e-16 | 6 |
gland of gut | 8.06e-10 | 10 |
major salivary gland | 3.12e-09 | 2 |
pineal body | 7.04e-08 | 2 |
regional part of epithalamus | 7.04e-08 | 2 |
secretory circumventricular organ | 7.04e-08 | 2 |
circumventricular organ | 7.04e-08 | 2 |
epithalamus | 7.04e-08 | 2 |