FFCP PHASE1:Hg19::chr14:58332774..58332786,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=341880 | |EntrezGene=341880 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19845 | |HGNC=19845 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4Z9 | |UniProt=G3V4Z9 | ||
|association_with_transcript=0bp_to_ENST00000556826_5end | |association_with_transcript=0bp_to_ENST00000556826_5end | ||
|cluster_id=chr14:58332774..58332786,- | |||
|coexpression_cluster_id=C89 | |||
|description=CAGE_peak_4_at_SLC35F4_5end | |description=CAGE_peak_4_at_SLC35F4_5end | ||
|id=chr14:58332774..58332786,- | |id=chr14:58332774..58332786,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.96e-34;3 | |||
|ontology_enrichment_disease=DOID:0060060!1.98e-08!1;DOID:0060061!1.98e-08!1;DOID:8691!1.98e-08!1 | |ontology_enrichment_disease=DOID:0060060!1.98e-08!1;DOID:0060061!1.98e-08!1;DOID:8691!1.98e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:5409;5.56e-26;4!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,5.56e-26,4;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0003076!9.88e-38!15;UBERON:0003057!9.88e-38!15;UBERON:0001049!1.24e-36!57;UBERON:0005068!1.24e-36!57;UBERON:0006241!1.24e-36!57;UBERON:0007135!1.24e-36!57;UBERON:0005743!5.70e-32!86;UBERON:0001017!2.73e-30!82;UBERON:0000073!1.20e-28!94;UBERON:0001016!1.20e-28!94;UBERON:0003075!3.40e-26!86;UBERON:0007284!3.40e-26!86;UBERON:0002346!6.93e-25!90;UBERON:0002616!5.00e-24!59;UBERON:0000955!1.03e-22!69;UBERON:0006238!1.03e-22!69;UBERON:0002240!2.81e-22!3;UBERON:0004733!2.14e-21!12;UBERON:0002028!2.14e-21!12;UBERON:0007277!2.14e-21!12;UBERON:0004732!1.02e-19!13;UBERON:0000369!5.57e-17!4;UBERON:0002435!5.57e-17!4;UBERON:0000204!5.57e-17!4;UBERON:0010082!5.57e-17!4;UBERON:0007023!1.02e-16!115;UBERON:0004121!1.90e-14!169;UBERON:0000153!2.92e-14!129;UBERON:0007811!2.92e-14!129;UBERON:0000924!4.99e-14!173;UBERON:0006601!4.99e-14!173;UBERON:0005174!1.33e-13!5;UBERON:0001137!1.33e-13!5;UBERON:0000033!2.75e-13!123;UBERON:0002680!2.84e-13!9;UBERON:0001895!2.84e-13!9;UBERON:0010092!2.84e-13!9;UBERON:0002780!2.30e-12!41;UBERON:0001890!2.30e-12!41;UBERON:0006240!2.30e-12!41;UBERON:0003080!4.81e-12!42;UBERON:0002037!6.80e-12!6;UBERON:0006215!6.80e-12!6;UBERON:0000025!5.96e-11!194;UBERON:0005383!6.79e-11!3;UBERON:0005382!6.79e-11!3;UBERON:0001896!1.41e-10!3;UBERON:0005290!1.41e-10!3;UBERON:0010096!1.41e-10!3;UBERON:0009663!6.25e-10!7;UBERON:0003056!7.41e-10!61;UBERON:0001869!7.45e-10!32;UBERON:0002791!1.54e-09!33;UBERON:0002020!3.03e-09!34;UBERON:0003528!3.03e-09!34;UBERON:0001893!3.03e-09!34;UBERON:0001874!8.15e-09!1;UBERON:0002298!1.65e-08!8;UBERON:0001882!2.64e-08!1;UBERON:0005403!2.64e-08!1;UBERON:0002022!2.84e-08!1;UBERON:0002902!3.79e-08!1;UBERON:0009899!3.79e-08!1;UBERON:0004111!4.41e-08!241;UBERON:0000475!7.90e-08!365;UBERON:0002308!7.95e-08!9;UBERON:0002420!7.95e-08!9;UBERON:0000125!7.95e-08!9;UBERON:0007245!7.95e-08!9;UBERON:0010009!7.95e-08!9;UBERON:0010011!7.95e-08!9;UBERON:0000454!7.95e-08!9;UBERON:0000483!3.83e-07!309;UBERON:0000119!4.92e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.07e-18;6!UBERON:0002680;2.45e-12;9!UBERON:0001895;2.45e-12;9!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.07e-18,6;UBERON:0006215,9.07e-18,6;UBERON:0002680,2.45e-12,9;UBERON:0001895,2.45e-12,9;UBERON:0010092,2.45e-12,9;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15 | |||
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|short_description=p4@SLC35F4 | |short_description=p4@SLC35F4 | ||
}} | }} |
Latest revision as of 18:22, 24 September 2015
Short description: | p4@SLC35F4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC35F4_5end |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | 0bp_to_ENST00000556826_5end |
EntrezGene: | SLC35F4 |
HGNC: | 19845 |
UniProt: | G3V4Z9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.07e-18 | 6 |
rhombic lip | 9.07e-18 | 6 |
regional part of metencephalon | 2.45e-12 | 9 |
metencephalon | 2.45e-12 | 9 |
future metencephalon | 2.45e-12 | 9 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 5.56e-26 | 4 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |