FFCP PHASE1:Hg19::chr14:53619880..53620056,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80821 | |EntrezGene=80821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19714 | |HGNC=19714 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9D1,E7EMC4,Q8NEL9 | |UniProt=G5E9D1,E7EMC4,Q8NEL9 | ||
|association_with_transcript=0bp_to_ENST00000357758,ENST00000395606,ENST00000395610,NM_001160147,NM_001160148,NM_030637,uc001xah.2,uc001xai.2,uc001xaj.2_5end | |association_with_transcript=0bp_to_ENST00000357758,ENST00000395606,ENST00000395610,NM_001160147,NM_001160148,NM_030637,uc001xah.2,uc001xai.2,uc001xaj.2_5end | ||
|cluster_id=chr14:53619880..53620056,- | |||
|description=CAGE_peak_1_at_DDHD1_5end | |description=CAGE_peak_1_at_DDHD1_5end | ||
|id=chr14:53619880..53620056,- | |id=chr14:53619880..53620056,- | ||
|ontology_enrichment_celltype=CL:0000738!3.69e-39!140;CL:0002087!3.61e-38!119;CL:0000037!4.27e-35!172;CL:0000566!4.27e-35!172;CL:0002031!7.42e-35!124;CL:0002032!1.27e-31!165;CL:0000837!1.27e-31!165;CL:0000988!3.63e-30!182;CL:0000766!1.95e-19!76;CL:0002194!9.11e-19!63;CL:0000576!9.11e-19!63;CL:0000040!9.11e-19!63;CL:0000559!9.11e-19!63;CL:0000839!1.30e-18!70;CL:0002057!1.73e-18!42;CL:0000860!6.80e-18!45;CL:0002009!1.46e-17!65;CL:0000557!2.04e-17!71;CL:0000838!5.40e-17!52;CL:0000542!5.67e-17!53;CL:0000051!5.67e-17!53;CL:0000763!5.54e-15!112;CL:0000049!5.54e-15!112;CL:0000945!3.49e-09!24;CL:0000826!3.49e-09!24;CL:0000791!4.46e-08!18;CL:0000789!4.46e-08!18;CL:0002420!4.46e-08!18;CL:0002419!4.46e-08!18;CL:0000790!4.46e-08!18;CL:0000084!1.65e-07!25;CL:0000827!1.65e-07!25;CL:0000134!5.54e-07!358 | |ontology_enrichment_celltype=CL:0000738!3.69e-39!140;CL:0002087!3.61e-38!119;CL:0000037!4.27e-35!172;CL:0000566!4.27e-35!172;CL:0002031!7.42e-35!124;CL:0002032!1.27e-31!165;CL:0000837!1.27e-31!165;CL:0000988!3.63e-30!182;CL:0000766!1.95e-19!76;CL:0002194!9.11e-19!63;CL:0000576!9.11e-19!63;CL:0000040!9.11e-19!63;CL:0000559!9.11e-19!63;CL:0000839!1.30e-18!70;CL:0002057!1.73e-18!42;CL:0000860!6.80e-18!45;CL:0002009!1.46e-17!65;CL:0000557!2.04e-17!71;CL:0000838!5.40e-17!52;CL:0000542!5.67e-17!53;CL:0000051!5.67e-17!53;CL:0000763!5.54e-15!112;CL:0000049!5.54e-15!112;CL:0000945!3.49e-09!24;CL:0000826!3.49e-09!24;CL:0000791!4.46e-08!18;CL:0000789!4.46e-08!18;CL:0002420!4.46e-08!18;CL:0002419!4.46e-08!18;CL:0000790!4.46e-08!18;CL:0000084!1.65e-07!25;CL:0000827!1.65e-07!25;CL:0000134!5.54e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.78e-13;33!CL:0002057;2.78e-13;33!CL:0000473;3.83e-12;39!CL:0000234;3.83e-12;39!CL:0000576;6.60e-12;48!CL:0002087;1.36e-11;104!CL:0000542;4.72e-10;53!CL:0000766;7.90e-10;69!CL:0000945;3.46e-09;24!CL:0000738;2.11e-08;136!CL:0000791;4.70e-08;18!CL:0000789;4.70e-08;18!CL:0002419;4.70e-08;18!CL:0000084;1.81e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.14e-39,136;CL:0002087,7.61e-39,115;CL:0002031,2.14e-35,120;CL:0000037,2.28e-35,168;CL:0002032,7.08e-32,161;CL:0000837,7.08e-32,161;CL:0000988,5.76e-31,177;CL:0000766,5.76e-20,72;CL:0002194,1.87e-19,59;CL:0000576,1.87e-19,59;CL:0000040,1.87e-19,59;CL:0000559,1.87e-19,59;CL:0000473,2.03e-19,48;CL:0000234,2.03e-19,48;CL:0000839,3.52e-19,66;CL:0000860,1.73e-18,42;CL:0002057,1.73e-18,42;CL:0002009,3.68e-18,61;CL:0000557,6.40e-18,67;CL:0000838,5.40e-17,52;CL:0000542,5.67e-17,53;CL:0000051,5.67e-17,53;CL:0000763,3.76e-15,108;CL:0000049,3.76e-15,108;CL:0000945,3.49e-09,24;CL:0000826,3.49e-09,24;CL:0000791,4.45e-08,18;CL:0000789,4.45e-08,18;CL:0002420,4.45e-08,18;CL:0002419,4.45e-08,18;CL:0000790,4.45e-08,18;CL:0000084,1.65e-07,25;CL:0000827,1.65e-07,25;CL:0000134,4.70e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.04e-13;42!CL:0000051;4.72e-10;53!CL:0000790;4.70e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.82e-18!102;UBERON:0003061!5.82e-18!102;UBERON:0001049!7.42e-18!57;UBERON:0005068!7.42e-18!57;UBERON:0006241!7.42e-18!57;UBERON:0007135!7.42e-18!57;UBERON:0007023!8.47e-17!115;UBERON:0002780!8.69e-16!41;UBERON:0001890!8.69e-16!41;UBERON:0006240!8.69e-16!41;UBERON:0003080!9.41e-16!42;UBERON:0002616!2.99e-15!59;UBERON:0001017!4.21e-15!82;UBERON:0001474!5.72e-15!86;UBERON:0002371!1.20e-14!80;UBERON:0002193!1.83e-14!112;UBERON:0000955!6.03e-14!69;UBERON:0006238!6.03e-14!69;UBERON:0005743!1.12e-13!86;UBERON:0000073!1.34e-13!94;UBERON:0001016!1.34e-13!94;UBERON:0002020!5.88e-13!34;UBERON:0003528!5.88e-13!34;UBERON:0004765!6.53e-13!101;UBERON:0001434!6.53e-13!101;UBERON:0001893!7.35e-13!34;UBERON:0002791!2.10e-12!33;UBERON:0001869!6.58e-12!32;UBERON:0002619!1.39e-10!22;UBERON:0001950!1.80e-10!20;UBERON:0003075!7.63e-10!86;UBERON:0007284!7.63e-10!86;UBERON:0000956!1.36e-09!25;UBERON:0000203!1.36e-09!25;UBERON:0002346!1.41e-09!90;UBERON:0002405!3.64e-09!115;UBERON:0003056!8.18e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.94e-11;41!UBERON:0001890;1.94e-11;41!UBERON:0001893;3.86e-11;34!UBERON:0003528;5.81e-11;34!UBERON:0002020;5.81e-11;34!UBERON:0002791;7.92e-11;32!UBERON:0001869;9.72e-11;32!UBERON:0002619;1.59e-10;22!UBERON:0001950;1.79e-10;20!UBERON:0000073;3.86e-10;53!UBERON:0002616;3.86e-10;53!UBERON:0000956;1.50e-09;25!UBERON:0000203;1.50e-09;25!UBERON:0001017;3.44e-07;75!UBERON:0000955;4.91e-07;68!UBERON:0001016;5.87e-07;83 | |||
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| ||
|short_description=p1@DDHD1 | |short_description=p1@DDHD1 | ||
}} | }} |
Latest revision as of 07:17, 20 September 2015
Short description: | p1@DDHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DDHD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357758, ENST00000395606, ENST00000395610, NM_001160147, NM_001160148, NM_030637, uc001xah.2, uc001xai.2, uc001xaj.2_5end |
EntrezGene: | DDHD1 |
HGNC: | 19714 |
UniProt: | G5E9D1E7EMC4Q8NEL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.04e-18 | 98 |
blood island | 3.04e-18 | 98 |
neural tube | 7.38e-18 | 56 |
neural rod | 7.38e-18 | 56 |
future spinal cord | 7.38e-18 | 56 |
neural keel | 7.38e-18 | 56 |
regional part of nervous system | 1.53e-16 | 53 |
regional part of brain | 1.53e-16 | 53 |
adult organism | 2.26e-16 | 114 |
regional part of forebrain | 8.69e-16 | 41 |
forebrain | 8.69e-16 | 41 |
anterior neural tube | 8.69e-16 | 41 |
future forebrain | 8.69e-16 | 41 |
bone element | 2.95e-15 | 82 |
central nervous system | 4.78e-15 | 81 |
bone marrow | 5.81e-15 | 76 |
nervous system | 7.39e-15 | 89 |
hemolymphoid system | 1.29e-14 | 108 |
brain | 6.72e-14 | 68 |
future brain | 6.72e-14 | 68 |
immune system | 3.74e-13 | 93 |
brain grey matter | 5.88e-13 | 34 |
gray matter | 5.88e-13 | 34 |
telencephalon | 7.35e-13 | 34 |
regional part of telencephalon | 5.28e-12 | 32 |
cerebral hemisphere | 6.58e-12 | 32 |
skeletal system | 9.09e-12 | 100 |
skeletal element | 1.33e-11 | 90 |
regional part of cerebral cortex | 1.39e-10 | 22 |
neocortex | 1.80e-10 | 20 |
neural plate | 9.16e-10 | 82 |
presumptive neural plate | 9.16e-10 | 82 |
cerebral cortex | 1.36e-09 | 25 |
pallium | 1.36e-09 | 25 |
neurectoderm | 1.74e-09 | 86 |
pre-chordal neural plate | 3.98e-08 | 61 |