FFCP PHASE1:Hg19::chr19:55084417..55084428,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11027 | |EntrezGene=11027 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6603 | |HGNC=6603 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000495786_5end | |association_with_transcript=30bp_to_ENST00000495786_5end | ||
|cluster_id=chr19:55084417..55084428,+ | |||
|coexpression_cluster_id=C299 | |||
|description=CAGE_peak_4_at_LILRA2_5end | |description=CAGE_peak_4_at_LILRA2_5end | ||
|id=chr19:55084417..55084428,+ | |id=chr19:55084417..55084428,+ | ||
|ontology_enrichment_celltype=CL:0000766!8.06e-62!76;CL:0000763!1.29e-61!112;CL:0000049!1.29e-61!112;CL:0002194!2.16e-54!63;CL:0000576!2.16e-54!63;CL:0000040!2.16e-54!63;CL:0000559!2.16e-54!63;CL:0000839!2.83e-54!70;CL:0002009!2.73e-52!65;CL:0000557!5.22e-51!71;CL:0002057!5.39e-45!42;CL:0000037!9.15e-45!172;CL:0000566!9.15e-45!172;CL:0002032!9.82e-43!165;CL:0000837!9.82e-43!165;CL:0000988!1.44e-42!182;CL:0000860!2.95e-41!45;CL:0000738!2.98e-37!140;CL:0002087!2.76e-33!119;CL:0002031!6.60e-31!124;CL:0002393!2.02e-14!9;CL:0002397!2.02e-14!9;CL:0000134!9.75e-12!358;CL:0002320!3.76e-11!365;CL:0000219!4.09e-09!390;CL:0000094!9.39e-09!8;CL:0000081!4.74e-08!11;CL:0000875!1.21e-07!3;CL:0002396!1.21e-07!3;CL:0000034!7.19e-07!444;CL:0000048!9.27e-07!430 | |ontology_enrichment_celltype=CL:0000766!8.06e-62!76;CL:0000763!1.29e-61!112;CL:0000049!1.29e-61!112;CL:0002194!2.16e-54!63;CL:0000576!2.16e-54!63;CL:0000040!2.16e-54!63;CL:0000559!2.16e-54!63;CL:0000839!2.83e-54!70;CL:0002009!2.73e-52!65;CL:0000557!5.22e-51!71;CL:0002057!5.39e-45!42;CL:0000037!9.15e-45!172;CL:0000566!9.15e-45!172;CL:0002032!9.82e-43!165;CL:0000837!9.82e-43!165;CL:0000988!1.44e-42!182;CL:0000860!2.95e-41!45;CL:0000738!2.98e-37!140;CL:0002087!2.76e-33!119;CL:0002031!6.60e-31!124;CL:0002393!2.02e-14!9;CL:0002397!2.02e-14!9;CL:0000134!9.75e-12!358;CL:0002320!3.76e-11!365;CL:0000219!4.09e-09!390;CL:0000094!9.39e-09!8;CL:0000081!4.74e-08!11;CL:0000875!1.21e-07!3;CL:0002396!1.21e-07!3;CL:0000034!7.19e-07!444;CL:0000048!9.27e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000576;3.61e-24;48!CL:0000860;4.40e-22;33!CL:0002057;4.40e-22;33!CL:0000875;2.23e-19;3!CL:0002396;2.23e-19;3!CL:0000766;3.27e-19;69!CL:0000473;9.93e-19;39!CL:0000234;9.93e-19;39!CL:0000763;5.79e-11;100!CL:0002393;8.65e-10;6!CL:0002397;8.65e-10;6!CL:0000094;4.04e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.75e-42,42;CL:0002057,2.75e-42,42;CL:0000473,8.37e-41,48;CL:0000234,8.37e-41,48;CL:0000766,5.88e-35,72;CL:0002194,7.71e-32,59;CL:0000576,7.71e-32,59;CL:0000040,7.71e-32,59;CL:0000559,7.71e-32,59;CL:0002009,1.11e-30,61;CL:0000763,3.97e-29,108;CL:0000049,3.97e-29,108;CL:0000839,4.31e-28,66;CL:0000557,1.28e-27,67;CL:0002393,2.31e-24,9;CL:0002397,2.31e-24,9;CL:0000037,2.61e-20,168;CL:0000738,4.68e-20,136;CL:0002032,1.20e-19,161;CL:0000837,1.20e-19,161;CL:0000875,2.25e-19,3;CL:0002396,2.25e-19,3;CL:0000988,5.20e-19,177;CL:0002087,3.89e-18,115;CL:0002031,1.92e-15,120;CL:0000094,2.72e-07,8;CL:0000134,7.93e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.84e-28;42!CL:0000049;1.42e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!6.11e-10!31;DOID:1240!3.70e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.52e-59!102;UBERON:0003061!6.52e-59!102;UBERON:0002193!8.43e-54!112;UBERON:0002371!1.21e-43!80;UBERON:0001474!1.37e-39!86;UBERON:0002405!4.58e-33!115;UBERON:0004765!1.41e-31!101;UBERON:0001434!1.41e-31!101;UBERON:0003081!2.04e-18!216;UBERON:0000178!2.32e-17!15;UBERON:0000179!2.32e-17!15;UBERON:0000463!2.32e-17!15;UBERON:0002204!1.06e-13!167;UBERON:0002384!2.34e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-18;15!UBERON:0000179;1.17e-18;15!UBERON:0000463;1.17e-18;15!UBERON:0002390;3.54e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.35e-38,98;UBERON:0003061,2.35e-38,98;UBERON:0002193,2.37e-34,108;UBERON:0002371,6.40e-24,76;UBERON:0001474,6.71e-22,82;UBERON:0002405,4.52e-21,93;UBERON:0004765,1.28e-19,90;UBERON:0000178,2.29e-18,15;UBERON:0000179,2.29e-18,15;UBERON:0000463,2.29e-18,15;UBERON:0001434,2.80e-17,100;UBERON:0003081,7.35e-16,203;UBERON:0002204,8.33e-09,167;UBERON:0000926,2.57e-08,315;UBERON:0004120,2.57e-08,315;UBERON:0006603,2.57e-08,315 | |||
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| ||
|short_description=p4@LILRA2 | |short_description=p4@LILRA2 | ||
}} | }} |
Latest revision as of 22:53, 19 September 2015
Short description: | p4@LILRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LILRA2_5end |
Coexpression cluster: | C299_CD14CD16_Eosinophils_Neutrophils_CD14_Whole_Basophils_blood |
Association with transcript: | 30bp_to_ENST00000495786_5end |
EntrezGene: | LILRA2 |
HGNC: | 6603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.75e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.75e-42 | 42 |
defensive cell | 8.37e-41 | 48 |
phagocyte | 8.37e-41 | 48 |
myeloid leukocyte | 5.88e-35 | 72 |
monopoietic cell | 7.71e-32 | 59 |
monocyte | 7.71e-32 | 59 |
monoblast | 7.71e-32 | 59 |
promonocyte | 7.71e-32 | 59 |
macrophage dendritic cell progenitor | 1.11e-30 | 61 |
myeloid cell | 3.97e-29 | 108 |
common myeloid progenitor | 3.97e-29 | 108 |
myeloid lineage restricted progenitor cell | 4.31e-28 | 66 |
granulocyte monocyte progenitor cell | 1.28e-27 | 67 |
intermediate monocyte | 2.31e-24 | 9 |
CD14-positive, CD16-positive monocyte | 2.31e-24 | 9 |
hematopoietic stem cell | 2.61e-20 | 168 |
leukocyte | 4.68e-20 | 136 |
hematopoietic oligopotent progenitor cell | 1.20e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-19 | 161 |
non-classical monocyte | 2.25e-19 | 3 |
CD14-low, CD16-positive monocyte | 2.25e-19 | 3 |
hematopoietic cell | 5.20e-19 | 177 |
nongranular leukocyte | 3.89e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.92e-15 | 120 |
granulocyte | 2.72e-07 | 8 |
mesenchymal cell | 7.93e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.35e-38 | 98 |
blood island | 2.35e-38 | 98 |
hemolymphoid system | 2.37e-34 | 108 |
bone marrow | 6.40e-24 | 76 |
bone element | 6.71e-22 | 82 |
immune system | 4.52e-21 | 93 |
skeletal element | 1.28e-19 | 90 |
blood | 2.29e-18 | 15 |
haemolymphatic fluid | 2.29e-18 | 15 |
organism substance | 2.29e-18 | 15 |
skeletal system | 2.80e-17 | 100 |
lateral plate mesoderm | 7.35e-16 | 203 |
musculoskeletal system | 8.33e-09 | 167 |
mesoderm | 2.57e-08 | 315 |
mesoderm-derived structure | 2.57e-08 | 315 |
presumptive mesoderm | 2.57e-08 | 315 |