FFCP PHASE1:Hg19::chr11:17373338..17373356,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:17373338..17373356,+
|short_description=p2@B7H6
|description=CAGE_peak_2_at_B7H6_5end
|association_with_transcript=21bp_to_uc001mmz.3_5end
|EntrezGene=37...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=374383 | |EntrezGene=374383 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_uc001mmz.3_5end | |||
|cluster_id=chr11:17373338..17373356,+ | |||
|description=CAGE_peak_2_at_B7H6_5end | |||
|id=chr11:17373338..17373356,+ | |||
|ontology_enrichment_celltype=CL:0002009!6.53e-17!65;CL:0000557!5.12e-16!71;CL:0002194!7.80e-16!63;CL:0000576!7.80e-16!63;CL:0000040!7.80e-16!63;CL:0000559!7.80e-16!63;CL:0000860!6.34e-14!45;CL:0000766!9.96e-14!76;CL:0000839!1.36e-13!70;CL:0002057!7.38e-13!42;CL:0000763!7.24e-09!112;CL:0000049!7.24e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.58e-17;33!CL:0002057;2.58e-17;33!CL:0000473;9.43e-17;39!CL:0000234;9.43e-17;39!CL:0000576;3.29e-10;48!CL:0000766;6.14e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,3.43e-18,61;CL:0002194,5.58e-17,59;CL:0000576,5.58e-17,59;CL:0000040,5.58e-17,59;CL:0000559,5.58e-17,59;CL:0000473,9.75e-17,48;CL:0000234,9.75e-17,48;CL:0000557,1.24e-16,67;CL:0000839,2.15e-14,66;CL:0000766,2.23e-14,72;CL:0000860,6.60e-14,42;CL:0002057,6.60e-14,42;CL:0000763,4.43e-10,108;CL:0000049,4.43e-10,108 | |||
|ontology_enrichment_development_v019=CL:0002057;8.10e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.62e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000062!3.61e-14!511;UBERON:0001474!1.00e-12!86;UBERON:0000923!1.47e-12!604;UBERON:0005291!1.47e-12!604;UBERON:0006598!1.47e-12!604;UBERON:0002532!1.47e-12!604;UBERON:0002050!1.59e-12!605;UBERON:0005423!1.59e-12!605;UBERON:0002371!2.89e-12!80;UBERON:0000467!4.52e-12!625;UBERON:0000480!8.73e-12!626;UBERON:0000922!1.60e-11!612;UBERON:0004765!5.37e-11!101;UBERON:0001434!5.37e-11!101;UBERON:0000468!2.18e-09!659;UBERON:0002405!5.77e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.89e-14,82;UBERON:0002371,1.73e-13,76;UBERON:0004765,7.20e-12,90;UBERON:0001434,1.58e-10,100;UBERON:0002405,1.09e-09,93;UBERON:0005423,1.20e-08,581;UBERON:0000922,4.50e-08,592;UBERON:0000923,1.30e-07,560;UBERON:0010316,1.30e-07,560;UBERON:0005291,1.30e-07,560;UBERON:0006598,1.30e-07,560;UBERON:0010317,1.30e-07,560;UBERON:0002532,1.30e-07,560;UBERON:0002050,1.56e-07,564;UBERON:0002390,1.85e-07,98;UBERON:0003061,1.85e-07,98;UBERON:0002193,4.27e-07,108 | |||
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| ||
|short_description=p2@B7H6 | |||
}} | }} |
Latest revision as of 00:14, 17 September 2015
Short description: | p2@B7H6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_B7H6_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_uc001mmz.3_5end |
EntrezGene: | B7H6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 3.43e-18 | 61 |
monopoietic cell | 5.58e-17 | 59 |
monocyte | 5.58e-17 | 59 |
monoblast | 5.58e-17 | 59 |
promonocyte | 5.58e-17 | 59 |
defensive cell | 9.75e-17 | 48 |
phagocyte | 9.75e-17 | 48 |
granulocyte monocyte progenitor cell | 1.24e-16 | 67 |
myeloid lineage restricted progenitor cell | 2.15e-14 | 66 |
myeloid leukocyte | 2.23e-14 | 72 |
classical monocyte | 6.60e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.60e-14 | 42 |
myeloid cell | 4.43e-10 | 108 |
common myeloid progenitor | 4.43e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
bone element | 9.89e-14 | 82 |
bone marrow | 1.73e-13 | 76 |
skeletal element | 7.20e-12 | 90 |
skeletal system | 1.58e-10 | 100 |
immune system | 1.09e-09 | 93 |
developing anatomical structure | 1.20e-08 | 581 |
embryo | 4.50e-08 | 592 |
germ layer | 1.30e-07 | 560 |
germ layer / neural crest | 1.30e-07 | 560 |
embryonic tissue | 1.30e-07 | 560 |
presumptive structure | 1.30e-07 | 560 |
germ layer / neural crest derived structure | 1.30e-07 | 560 |
epiblast (generic) | 1.30e-07 | 560 |
embryonic structure | 1.56e-07 | 564 |
hematopoietic system | 1.85e-07 | 98 |
blood island | 1.85e-07 | 98 |
hemolymphoid system | 4.27e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.62e-07 | 143 |