FFCP PHASE1:Hg19::chr19:50868888..50868902,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9476 | |EntrezGene=9476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13395 | |HGNC=13395 | ||
|TSSclassifier=strong | |||
|UniProt=O96009 | |UniProt=O96009 | ||
|association_with_transcript=28bp_to_ENST00000253719,NM_004851,uc002prx.2_5end | |association_with_transcript=28bp_to_ENST00000253719,NM_004851,uc002prx.2_5end | ||
|cluster_id=chr19:50868888..50868902,- | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_1_at_NAPSA_5end | |description=CAGE_peak_1_at_NAPSA_5end | ||
|id=chr19:50868888..50868902,- | |id=chr19:50868888..50868902,- | ||
|ontology_enrichment_celltype=CL:0000945!5.25e-25!24;CL:0000826!5.25e-25!24;CL:0000542!1.31e-18!53;CL:0000051!1.31e-18!53;CL:0000236!1.98e-17!14;CL:0000838!3.43e-17!52;CL:0000784!4.41e-09!3;CL:0000738!6.28e-09!140;CL:0002087!4.30e-08!119 | |ontology_enrichment_celltype=CL:0000945!5.25e-25!24;CL:0000826!5.25e-25!24;CL:0000542!1.31e-18!53;CL:0000051!1.31e-18!53;CL:0000236!1.98e-17!14;CL:0000838!3.43e-17!52;CL:0000784!4.41e-09!3;CL:0000738!6.28e-09!140;CL:0002087!4.30e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.88e-14;24!CL:0000784;1.42e-10;3!CL:0000313;5.28e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.78e-14,24;CL:0000826,4.78e-14,24;CL:0000784,1.32e-10,3;CL:0000313,5.28e-09,1;CL:0000838,7.89e-08,52;CL:0000542,1.16e-07,53;CL:0000051,1.16e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.78e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;5.28e-09;1!DOID:630;1.78e-08;1!DOID:0050177;1.78e-08;1!DOID:0050427;1.78e-08;1!DOID:3908;8.53e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,5.28e-09,1;DOID:630,1.78e-08,1;DOID:0050177,1.78e-08,1;DOID:0050427,1.78e-08,1;DOID:3908,8.66e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.82e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.31e-09;1!UBERON:0006518;3.31e-09;1!UBERON:0008949;3.31e-09;1!UBERON:0000101;3.31e-09;1!UBERON:0002167;3.31e-09;1!UBERON:0004911;5.28e-09;1!UBERON:0001301;5.70e-09;1!UBERON:0002048;1.65e-08;22!UBERON:0000117;1.65e-08;22!UBERON:0000171;1.65e-08;22!UBERON:0000170;1.65e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.31e-09,1;UBERON:0006518,3.31e-09,1;UBERON:0008949,3.31e-09,1;UBERON:0000101,3.31e-09,1;UBERON:0002167,3.31e-09,1;UBERON:0004911,5.28e-09,1;UBERON:0001301,5.70e-09,1;UBERON:0002048,1.66e-08,22;UBERON:0000117,1.66e-08,22;UBERON:0000171,1.66e-08,22;UBERON:0000170,1.66e-08,22;UBERON:0005597,1.66e-08,22;UBERON:0000118,1.66e-08,22;UBERON:0005153,6.64e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,8.37361401566913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73100543109634,5.09023654589664,7.87107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,1.09227722252426,0.889509253863555,0.426730222566507,1.20118796110804,0.574752439954483,1.98313461835459,0.954053754535364,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0.334372990781356,0,0,0,0.668462741311041,0.294605907474837,0,0,0.384273959177026,0.260118695119756,0,0,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.643311955441,0,0,0,0,0,1.66943437013739,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.7891750019852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.7939151181117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988823245360557,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13070500632772,0,0,0,0,16.2495801465088,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,136.806707871408,15.3167397354194,2.64000841298516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,553.479159338362,100.767959568886,464.776220099553,0,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,1.41923792260222,0.691403925334676,0,0,0,8.62815038452968,0,0,0,0,3.65263488203798,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.8359571256388,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,8.37361401566913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73100543109634,5.09023654589664,7.87107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,1.09227722252426,0.889509253863555,0.426730222566507,1.20118796110804,0.574752439954483,1.98313461835459,0.954053754535364,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0.334372990781356,0,0,0,0.668462741311041,0.294605907474837,0,0,0.384273959177026,0.260118695119756,0,0,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.643311955441,0,0,0,0,0,1.66943437013739,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.7891750019852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.7939151181117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988823245360557,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13070500632772,0,0,0,0,16.2495801465088,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,136.806707871408,15.3167397354194,2.64000841298516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,553.479159338362,100.767959568886,464.776220099553,0,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,1.41923792260222,0.691403925334676,0,0,0,8.62815038452968,0,0,0,0,3.65263488203798,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.8359571256388,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,1.28227396921293 | ||
|short_description=p1@NAPSA | |short_description=p1@NAPSA | ||
}} | }} |
Latest revision as of 10:58, 19 September 2015
Short description: | p1@NAPSA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NAPSA_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 28bp_to_ENST00000253719, NM_004851, uc002prx.2_5end |
EntrezGene: | NAPSA |
HGNC: | 13395 |
UniProt: | O96009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.78e-14 | 24 |
pro-B cell | 4.78e-14 | 24 |
plasmacytoid dendritic cell | 1.32e-10 | 3 |
serous secreting cell | 5.28e-09 | 1 |
lymphoid lineage restricted progenitor cell | 7.89e-08 | 52 |
lymphocyte | 1.16e-07 | 53 |
common lymphoid progenitor | 1.16e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.31e-09 | 1 |
right lung lobe | 3.31e-09 | 1 |
lower lobe of lung | 3.31e-09 | 1 |
lobe of lung | 3.31e-09 | 1 |
right lung | 3.31e-09 | 1 |
epithelium of female gonad | 5.28e-09 | 1 |
epididymis | 5.70e-09 | 1 |
lung | 1.66e-08 | 22 |
respiratory tube | 1.66e-08 | 22 |
respiration organ | 1.66e-08 | 22 |
pair of lungs | 1.66e-08 | 22 |
lung primordium | 1.66e-08 | 22 |
lung bud | 1.66e-08 | 22 |
epithelial bud | 6.64e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 5.28e-09 | 1 |
genetic disease | 1.78e-08 | 1 |
monogenic disease | 1.78e-08 | 1 |
xeroderma pigmentosum | 1.78e-08 | 1 |
non-small cell lung carcinoma | 8.66e-07 | 5 |