FFCP PHASE1:Hg19::chr14:33403217..33403226,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:33403217..33403226,+ | |||
|coexpression_cluster_id=C516 | |||
|description=CAGE_peak_at_chr14:33403217..33403226,+ | |description=CAGE_peak_at_chr14:33403217..33403226,+ | ||
|id=chr14:33403217..33403226,+ | |id=chr14:33403217..33403226,+ | ||
|ontology_enrichment_celltype=CL:0002605!5.07e-30!3;CL:0000064!2.65e-13!3;CL:0005012!2.65e-13!3;CL:0000067!2.65e-13!3;CL:0002304!2.65e-13!3;CL:0000128!3.16e-13!7;CL:0000126!3.16e-13!7;CL:0000127!3.16e-13!7;CL:0002453!3.16e-13!7;CL:0002319!1.55e-12!25;CL:0000133!1.85e-11!59;CL:0000047!2.08e-11!8;CL:0000221!2.26e-09!71 | |ontology_enrichment_celltype=CL:0002605!5.07e-30!3;CL:0000064!2.65e-13!3;CL:0005012!2.65e-13!3;CL:0000067!2.65e-13!3;CL:0002304!2.65e-13!3;CL:0000128!3.16e-13!7;CL:0000126!3.16e-13!7;CL:0000127!3.16e-13!7;CL:0002453!3.16e-13!7;CL:0002319!1.55e-12!25;CL:0000133!1.85e-11!59;CL:0000047!2.08e-11!8;CL:0000221!2.26e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0002605;2.12e-117;3!CL:0000128;4.98e-51;7!CL:0000126;4.98e-51;7!CL:0000127;4.98e-51;7!CL:0002319;5.28e-24;25!CL:0000243;1.23e-21;15!CL:0000125;1.23e-21;15!CL:0000047;4.21e-21;2!CL:0000095;1.85e-19;17!CL:0002149;5.54e-08;6!CL:0002255;5.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.59e-117,3;CL:0000128,5.43e-51,7;CL:0000126,5.43e-51,7;CL:0000127,5.43e-51,7;CL:0002453,5.43e-51,7;CL:0002319,5.28e-24,25;CL:0000243,1.28e-21,15;CL:0000125,1.28e-21,15;CL:0000030,1.28e-21,15;CL:0000339,1.28e-21,15;CL:0000095,1.91e-19,17;CL:0000123,1.91e-19,17;CL:0000133,4.78e-11,59;CL:0000221,3.20e-09,72;CL:0000333,4.57e-09,41;CL:0002149,5.54e-08,6;CL:0002255,5.54e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000339;1.23e-21;15!CL:0000133;9.34e-11;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3001;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001778!2.65e-13!3;UBERON:0001775!2.65e-13!3;UBERON:0000073!3.55e-12!94;UBERON:0001016!3.55e-12!94;UBERON:0001017!5.55e-12!82;UBERON:0005743!2.32e-11!86;UBERON:0000488!3.29e-10!4;UBERON:0004121!5.98e-10!169;UBERON:0000924!1.14e-09!173;UBERON:0006601!1.14e-09!173;UBERON:0002020!2.02e-09!34;UBERON:0003528!2.02e-09!34;UBERON:0000956!3.90e-09!25;UBERON:0000203!3.90e-09!25;UBERON:0003075!1.48e-07!86;UBERON:0007284!1.48e-07!86;UBERON:0000955!1.49e-07!69;UBERON:0006238!1.49e-07!69;UBERON:0001049!2.58e-07!57;UBERON:0005068!2.58e-07!57;UBERON:0006241!2.58e-07!57;UBERON:0007135!2.58e-07!57;UBERON:0002346!3.60e-07!90;UBERON:0001869!3.68e-07!32;UBERON:0002203!4.30e-07!6;UBERON:0001768!4.30e-07!6;UBERON:0002616!4.78e-07!59;UBERON:0002791!6.05e-07!33;UBERON:0003056!8.45e-07!61;UBERON:0001893!9.67e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.82e-14;25!UBERON:0000203;1.82e-14;25!UBERON:0002791;5.14e-12;32!UBERON:0001869;5.14e-12;32!UBERON:0003528;2.25e-11;34!UBERON:0002020;2.25e-11;34!UBERON:0001893;2.25e-11;34!UBERON:0002780;2.07e-07;41!UBERON:0001890;2.07e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.86e-14,25;UBERON:0000203,1.86e-14,25;UBERON:0002791,1.43e-11,32;UBERON:0001869,1.43e-11,32;UBERON:0003528,5.87e-11,34;UBERON:0002020,5.87e-11,34;UBERON:0001893,5.87e-11,34;UBERON:0002780,2.90e-09,41;UBERON:0001890,2.90e-09,41;UBERON:0003080,2.90e-09,41;UBERON:0006240,2.90e-09,41;UBERON:0001017,2.75e-08,81;UBERON:0001016,1.56e-07,89;UBERON:0000073,2.27e-07,53;UBERON:0002616,2.27e-07,53;UBERON:0001049,5.09e-07,56;UBERON:0005068,5.09e-07,56;UBERON:0006241,5.09e-07,56;UBERON:0007135,5.09e-07,56 | |||
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|short_description=p@chr14:33403217..33403226,+ | |short_description=p@chr14:33403217..33403226,+ | ||
}} | }} |
Latest revision as of 20:11, 24 July 2015
Short description: | p@chr14:33403217..33403226, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:33403217..33403226, + |
Coexpression cluster: | C516_endometrioid_clear_serous_anaplastic_malignant_oral_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.59e-117 | 3 |
oligodendrocyte | 5.43e-51 | 7 |
macroglial cell | 5.43e-51 | 7 |
astrocyte | 5.43e-51 | 7 |
oligodendrocyte precursor cell | 5.43e-51 | 7 |
neural cell | 5.28e-24 | 25 |
glial cell (sensu Vertebrata) | 1.28e-21 | 15 |
glial cell | 1.28e-21 | 15 |
glioblast | 1.28e-21 | 15 |
glioblast (sensu Vertebrata) | 1.28e-21 | 15 |
neuron associated cell | 1.91e-19 | 17 |
neuron associated cell (sensu Vertebrata) | 1.91e-19 | 17 |
neurectodermal cell | 4.78e-11 | 59 |
ectodermal cell | 3.20e-09 | 72 |
migratory neural crest cell | 4.57e-09 | 41 |
epithelial cell of uterus | 5.54e-08 | 6 |
stromal cell of endometrium | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.86e-14 | 25 |
pallium | 1.86e-14 | 25 |
regional part of telencephalon | 1.43e-11 | 32 |
cerebral hemisphere | 1.43e-11 | 32 |
brain grey matter | 5.87e-11 | 34 |
gray matter | 5.87e-11 | 34 |
telencephalon | 5.87e-11 | 34 |
regional part of forebrain | 2.90e-09 | 41 |
forebrain | 2.90e-09 | 41 |
anterior neural tube | 2.90e-09 | 41 |
future forebrain | 2.90e-09 | 41 |
central nervous system | 2.75e-08 | 81 |
nervous system | 1.56e-07 | 89 |
regional part of nervous system | 2.27e-07 | 53 |
regional part of brain | 2.27e-07 | 53 |
neural tube | 5.09e-07 | 56 |
neural rod | 5.09e-07 | 56 |
future spinal cord | 5.09e-07 | 56 |
neural keel | 5.09e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 5.54e-08 | 6 |