FFCP PHASE1:Hg19::chr14:32887167..32887184,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000556520,ENST00000557371_5end | |association_with_transcript=0bp_to_ENST00000556520,ENST00000557371_5end | ||
|cluster_id=chr14:32887167..32887184,- | |||
|description=CAGE_peak_1_at_ENST00000556520_5end,CAGE_peak_1_at_ENST00000557371_5end | |description=CAGE_peak_1_at_ENST00000556520_5end,CAGE_peak_1_at_ENST00000557371_5end | ||
|id=chr14:32887167..32887184,- | |id=chr14:32887167..32887184,- | ||
|ontology_enrichment_celltype=CL:0000148!5.66e-21!10;CL:0000541!5.66e-21!10;CL:0000147!1.11e-14!14;CL:0002567!4.04e-14!3;CL:0000710!1.05e-12!20;CL:0000075!4.65e-09!27;CL:0000333!3.30e-08!41;CL:0002077!3.60e-07!33 | |ontology_enrichment_celltype=CL:0000148!5.66e-21!10;CL:0000541!5.66e-21!10;CL:0000147!1.11e-14!14;CL:0002567!4.04e-14!3;CL:0000710!1.05e-12!20;CL:0000075!4.65e-09!27;CL:0000333!3.30e-08!41;CL:0002077!3.60e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002567;4.97e-59;3!CL:0000148;4.18e-49;10!CL:0000147;3.43e-35;14!CL:0000710;9.86e-25;20!CL:0002566;1.88e-21;1!CL:0000075;2.18e-18;27!CL:0002077;3.58e-12;34!CL:0000322;5.73e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,4.07e-59,3;CL:0000148,4.18e-49,10;CL:0000541,4.18e-49,10;CL:0000147,3.43e-35,14;CL:0000710,9.86e-25,20;CL:0002566,1.88e-21,1;CL:0000075,2.18e-18,27;CL:0000333,1.72e-16,41;CL:0002077,1.21e-14,34;CL:0000133,1.30e-11,59;CL:0000221,1.48e-09,72;CL:0000322,5.93e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000133;1.01e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!8.75e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.02e-11;2!DOID:3910;2.60e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.82e-11,2;DOID:3910,2.73e-11,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.60e-11;2!UBERON:0002173;2.60e-11;2!UBERON:0002186;2.60e-11;2!UBERON:0004821;5.73e-08;3!UBERON:0007499;5.73e-08;3!UBERON:0003215;5.73e-08;3!UBERON:0010368;5.73e-08;3!UBERON:0009911;5.73e-08;3!UBERON:0002299;5.73e-08;3!UBERON:0006524;5.73e-08;3!UBERON:0008874;5.73e-08;3!UBERON:0002169;5.73e-08;3!UBERON:0004894;5.73e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.73e-11,2;UBERON:0002173,2.73e-11,2;UBERON:0002186,2.73e-11,2;UBERON:0004821,5.93e-08,3;UBERON:0003215,5.93e-08,3;UBERON:0010368,5.93e-08,3;UBERON:0009911,5.93e-08,3;UBERON:0002299,5.93e-08,3;UBERON:0006524,5.93e-08,3;UBERON:0008874,5.93e-08,3;UBERON:0002169,5.93e-08,3;UBERON:0004894,5.93e-08,3 | |||
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| ||
|short_description=p1@ENST00000556520,p1@ENST00000557371 | |short_description=p1@ENST00000556520,p1@ENST00000557371 | ||
}} | }} |
Latest revision as of 20:10, 24 July 2015
Short description: | p1@ENST00000556520, p1@ENST00000557371 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000556520_5end, CAGE_peak_1_at_ENST00000557371_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000556520, ENST00000557371_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 4.07e-59 | 3 |
melanocyte | 4.18e-49 | 10 |
melanoblast | 4.18e-49 | 10 |
pigment cell | 3.43e-35 | 14 |
neurecto-epithelial cell | 9.86e-25 | 20 |
dark melanocyte | 1.88e-21 | 1 |
columnar/cuboidal epithelial cell | 2.18e-18 | 27 |
migratory neural crest cell | 1.72e-16 | 41 |
ecto-epithelial cell | 1.21e-14 | 34 |
neurectodermal cell | 1.30e-11 | 59 |
ectodermal cell | 1.48e-09 | 72 |
pneumocyte | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.73e-11 | 2 |
alveolar duct | 2.73e-11 | 2 |
bronchiole | 2.73e-11 | 2 |
pulmonary alveolus epithelium | 5.93e-08 | 3 |
alveolus | 5.93e-08 | 3 |
pulmonary lobule | 5.93e-08 | 3 |
lobule | 5.93e-08 | 3 |
alveolus of lung | 5.93e-08 | 3 |
alveolar system | 5.93e-08 | 3 |
pulmonary acinus | 5.93e-08 | 3 |
alveolar sac | 5.93e-08 | 3 |
alveolar wall | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.82e-11 | 2 |
lung adenocarcinoma | 2.73e-11 | 2 |