FFCP PHASE1:Hg19::chr14:24898871..24898876,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643866 | |EntrezGene=643866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20146 | |HGNC=20146 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UW01 | |UniProt=Q6UW01 | ||
|association_with_transcript=-140bp_to_ENST00000267406,NM_001039771,uc001wpg.3_5end | |association_with_transcript=-140bp_to_ENST00000267406,NM_001039771,uc001wpg.3_5end | ||
|cluster_id=chr14:24898871..24898876,- | |||
|description=CAGE_peak_3_at_CBLN3_5end | |description=CAGE_peak_3_at_CBLN3_5end | ||
|id=chr14:24898871..24898876,- | |id=chr14:24898871..24898876,- | ||
|ontology_enrichment_celltype=CL:0000037!3.64e-14!172;CL:0000566!3.64e-14!172;CL:0000988!2.14e-13!182;CL:0002057!2.19e-13!42;CL:0000738!3.55e-13!140;CL:0000860!8.74e-12!45;CL:0002032!1.67e-11!165;CL:0000837!1.67e-11!165;CL:0002031!4.22e-11!124;CL:0002087!5.05e-11!119;CL:0000763!2.01e-07!112;CL:0000049!2.01e-07!112;CL:0000557!3.04e-07!71;CL:0002009!4.81e-07!65 | |ontology_enrichment_celltype=CL:0000037!3.64e-14!172;CL:0000566!3.64e-14!172;CL:0000988!2.14e-13!182;CL:0002057!2.19e-13!42;CL:0000738!3.55e-13!140;CL:0000860!8.74e-12!45;CL:0002032!1.67e-11!165;CL:0000837!1.67e-11!165;CL:0002031!4.22e-11!124;CL:0002087!5.05e-11!119;CL:0000763!2.01e-07!112;CL:0000049!2.01e-07!112;CL:0000557!3.04e-07!71;CL:0002009!4.81e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.70e-11;33!CL:0002057;1.70e-11;33!CL:0002393;7.72e-10;6!CL:0002397;7.72e-10;6!CL:0000766;8.96e-09;69!CL:0000576;9.55e-09;48!CL:0002087;2.53e-08;104!CL:0000784;5.35e-08;3!CL:0000473;6.37e-08;39!CL:0000234;6.37e-08;39!CL:0000767;4.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.90e-23,136;CL:0000037,3.43e-22,168;CL:0000988,2.61e-20,177;CL:0002031,4.93e-18,120;CL:0002032,6.91e-18,161;CL:0000837,6.91e-18,161;CL:0000860,5.47e-17,42;CL:0002057,5.47e-17,42;CL:0000557,7.00e-16,67;CL:0002087,1.57e-15,115;CL:0000766,2.15e-15,72;CL:0000763,2.13e-14,108;CL:0000049,2.13e-14,108;CL:0000473,4.06e-14,48;CL:0000234,4.06e-14,48;CL:0002009,1.19e-13,61;CL:0000839,2.93e-13,66;CL:0002194,1.98e-11,59;CL:0000576,1.98e-11,59;CL:0000040,1.98e-11,59;CL:0000559,1.98e-11,59;CL:0000134,9.12e-10,354;CL:0002320,2.89e-09,361;CL:0000219,4.92e-08,386;CL:0000784,5.07e-08,3;CL:0000767,3.37e-07,3;CL:0000034,5.90e-07,441;CL:0000623,6.30e-07,3;CL:0000825,6.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.95e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.02e-08!80;UBERON:0001474!4.08e-07!86 | |ontology_enrichment_uberon=UBERON:0002371!2.02e-08!80;UBERON:0001474!4.08e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-15,76;UBERON:0001474,6.00e-14,82;UBERON:0002390,1.98e-12,98;UBERON:0003061,1.98e-12,98;UBERON:0004765,5.13e-12,90;UBERON:0002405,2.21e-11,93;UBERON:0002193,1.59e-10,108;UBERON:0001434,4.66e-10,100;UBERON:0002384,4.50e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0,0,0,0.0764134057479513,0,0,3.54027849164014,1.53531759238885,2.32224184974114,3.67768489791571,0.6024118375565,0.369754010166788,0.0774672005803016,0.284338464974843,4.11040615068786,15.5118714388926,6.61796676651468,6.51032612147556,0,0,0,0,0.377875943688809,0.242584061187816,0.929716147622738,1.6446715520873,0.619412741790207,1.43846196161075,1.7931249457037,1.41889337933151,2.75796544589295,1.29096936716765,8.12558919566051,0.188242339542605,0.545812300115692,0.224723484445085,3.36692281607993,2.24650318953266,4.47535988059329,0,0.398927315243264,0.852449501065388,2.61188314765726,0.56738522469114,0.622822248995575,0.251248665256743,0,1.3031330682307,1.81619850790011,1.10483290796269,2.53169909952708,0.845021145247767,2.12604299965044,2.93522103711726,1.34794357375794,0.750884464207532,0.964353520182481,0,0,0.365328307529268,3.51992488922645,1.09227722252426,0,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0,5.69212969109448,0.587237189370939,2.29363936875137,2.64342657158052,5.60508562981536,0.790152254325231,0,0.786021525498329,0.411202997999018,0.167186495390678,0.32592226663359,0.473447805734733,0,0.445641827540694,0,0.221533894583621,0,0.25618263945135,0,0.493313713811028,1.38175008892924,0,0,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0.752875595388864,0,0,0.473554504088034,0,1.61285394579786,1.33720097891754,0.868946423296794,2.43806866313962,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0.370784442784429,0.324547393654683,0,0,3.81584998888547,7.43593384014166,8.17206502925043,0,0,0,0,0,0.275118041940067,0.417989933073621,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0.560677600142307,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0.352303495931295,0.161872944368132,0.561803226808994,0,0,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0.113432183160021,1.07633781413317,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0,1.26216887122057,0,0,0.710019185033229,0.302256294682921,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0.171567810298526,0,1.1240175325762,0,0.648119116109707,0.325808305310325,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,1.07470227243418,0.290633938513962,0.766765358330422,0,0,1.86595303986695,5.47655822984453,2.14612136824846,0.190493682876507,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0.845302752556,0,1.04007436911366,0,1.41849132023278,0.532844358032199,0.285955987316295,0,0,0.325736184293735,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.336255431980582,1.97030760201927,1.72502059887614,1.79680250791648,0,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0.343143423810856,0.620304078368662,2.37285620900479,2.13455115606889,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0.902399225814824,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.551346289938122,0,0.145016693914229,0,0,0.165284915360978,0,0.893288987462089,0.10115778085555,0,0,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0.563391205064483,0.286822704408103,0.0982490410131212,0,0.709522128141196,0,0.658589785919804,0,0,0.288666338176536,1.34060455107157,5.44454924306613,0,0,0,0,0.459446800413919,0,0,0.569647187174163,0,0,0,0,0,0.427296284509893,0.962479855263359,0.245040215981032,0,1.298422916788,0.213425530045242,0,0.399158742865633,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0,0,0.338583555603207,0.642352300414798,0.201799707191048,1.27753871307098,1.03051603426729,0,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0,0.33307196799782,0,2.24568648489864,0.146508179271894,0.242721043499027,0.111443384277478,0.284136146806413,0,0,0.307160702099232,0.994147647766298,0,0.333926115068718,1.31843099381408,0.422250816255987,0.398495976502139,0.828851746593443,0.503865495708552,0.102268682502155,0.861593638227486,0,0.449341755736634,0,0.511572370226872,0.197286811273867,0,0,0.969332746095218,0.185536196323703,1.99613798001194,0,0.0874599999961957,0,1.593108275997,1.01701460117107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| ||
|short_description=p3@CBLN3 | |short_description=p3@CBLN3 | ||
}} | }} |
Latest revision as of 14:48, 19 September 2015
Short description: | p3@CBLN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CBLN3_5end |
Coexpression cluster: | NA |
Association with transcript: | -140bp_to_ENST00000267406, NM_001039771, uc001wpg.3_5end |
EntrezGene: | CBLN3 |
HGNC: | 20146 |
UniProt: | Q6UW01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.90e-23 | 136 |
hematopoietic stem cell | 3.43e-22 | 168 |
hematopoietic cell | 2.61e-20 | 177 |
hematopoietic lineage restricted progenitor cell | 4.93e-18 | 120 |
hematopoietic oligopotent progenitor cell | 6.91e-18 | 161 |
hematopoietic multipotent progenitor cell | 6.91e-18 | 161 |
classical monocyte | 5.47e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.47e-17 | 42 |
granulocyte monocyte progenitor cell | 7.00e-16 | 67 |
nongranular leukocyte | 1.57e-15 | 115 |
myeloid leukocyte | 2.15e-15 | 72 |
myeloid cell | 2.13e-14 | 108 |
common myeloid progenitor | 2.13e-14 | 108 |
defensive cell | 4.06e-14 | 48 |
phagocyte | 4.06e-14 | 48 |
macrophage dendritic cell progenitor | 1.19e-13 | 61 |
myeloid lineage restricted progenitor cell | 2.93e-13 | 66 |
monopoietic cell | 1.98e-11 | 59 |
monocyte | 1.98e-11 | 59 |
monoblast | 1.98e-11 | 59 |
promonocyte | 1.98e-11 | 59 |
mesenchymal cell | 9.12e-10 | 354 |
connective tissue cell | 2.89e-09 | 361 |
motile cell | 4.92e-08 | 386 |
plasmacytoid dendritic cell | 5.07e-08 | 3 |
basophil | 3.37e-07 | 3 |
stem cell | 5.90e-07 | 441 |
natural killer cell | 6.30e-07 | 3 |
pro-NK cell | 6.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-15 | 76 |
bone element | 6.00e-14 | 82 |
hematopoietic system | 1.98e-12 | 98 |
blood island | 1.98e-12 | 98 |
skeletal element | 5.13e-12 | 90 |
immune system | 2.21e-11 | 93 |
hemolymphoid system | 1.59e-10 | 108 |
skeletal system | 4.66e-10 | 100 |
connective tissue | 4.50e-09 | 371 |