FFCP PHASE1:Hg19::chr11:133821941..133821975,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:133821941..133821975,-
|short_description=p@chr11:133821941..133821975,-
|description=CAGE_peak_at_chr11:133821941..133821975,-
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:133821941..133821975,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr11:133821941..133821975,- | |||
|id=chr11:133821941..133821975,- | |||
|ontology_enrichment_celltype=CL:0000153!7.76e-08!9;CL:0000447!7.76e-08!9;CL:0000667!2.76e-07!6;CL:0000058!2.76e-07!6;CL:0000138!2.76e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000153;7.96e-13;9!CL:0000447;7.96e-13;9!CL:0000138;1.28e-10;6!CL:0000327;2.89e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,3.39e-13,9;CL:0000447,3.39e-13,9;CL:0000058,7.24e-11,6;CL:0000138,7.24e-11,6;CL:0000327,1.79e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.02e-09;3!UBERON:0007297;8.15e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.46e-45!115;UBERON:0001049!7.57e-25!57;UBERON:0005068!7.57e-25!57;UBERON:0006241!7.57e-25!57;UBERON:0007135!7.57e-25!57;UBERON:0003075!6.62e-24!86;UBERON:0007284!6.62e-24!86;UBERON:0005743!3.45e-22!86;UBERON:0002346!5.70e-22!90;UBERON:0001017!8.03e-22!82;UBERON:0000073!9.35e-22!94;UBERON:0001016!9.35e-22!94;UBERON:0000955!1.06e-21!69;UBERON:0006238!1.06e-21!69;UBERON:0002616!1.25e-20!59;UBERON:0000153!1.13e-16!129;UBERON:0007811!1.13e-16!129;UBERON:0000033!6.26e-16!123;UBERON:0003080!6.51e-15!42;UBERON:0003056!1.06e-14!61;UBERON:0002780!3.76e-14!41;UBERON:0001890!3.76e-14!41;UBERON:0006240!3.76e-14!41;UBERON:0004121!1.94e-13!169;UBERON:0000924!1.24e-12!173;UBERON:0006601!1.24e-12!173;UBERON:0003076!6.38e-12!15;UBERON:0003057!6.38e-12!15;UBERON:0001893!2.52e-11!34;UBERON:0002020!3.72e-11!34;UBERON:0003528!3.72e-11!34;UBERON:0002791!1.10e-10!33;UBERON:0001869!3.64e-10!32;UBERON:0004733!7.73e-10!12;UBERON:0002028!7.73e-10!12;UBERON:0007277!7.73e-10!12;UBERON:0001950!3.14e-09!20;UBERON:0002680!3.17e-09!9;UBERON:0001895!3.17e-09!9;UBERON:0010092!3.17e-09!9;UBERON:0002619!3.73e-09!22;UBERON:0004732!8.19e-09!13;UBERON:0000956!1.61e-08!25;UBERON:0000203!1.61e-08!25;UBERON:0000062!1.80e-08!511;UBERON:0000468!2.74e-07!659;UBERON:0002037!3.94e-07!6;UBERON:0006215!3.94e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;9.87e-12;114!UBERON:0003296;1.59e-11;4!UBERON:0010133;1.59e-11;4!UBERON:0004733;5.80e-10;12!UBERON:0002028;5.80e-10;12!UBERON:0006947;4.03e-09;3!UBERON:0004054;4.03e-09;3!UBERON:0004732;4.15e-09;13!UBERON:0000073;9.85e-09;53!UBERON:0002616;9.85e-09;53!UBERON:0003135;3.47e-08;11!UBERON:0002037;9.44e-08;6!UBERON:0002680;2.22e-07;9!UBERON:0001895;2.22e-07;9!UBERON:0007100;4.40e-07;25!UBERON:0005904;6.53e-07;4!UBERON:0000007;8.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.67e-40,114;UBERON:0000073,2.24e-13,53;UBERON:0002616,2.24e-13,53;UBERON:0001049,2.10e-12,56;UBERON:0005068,2.10e-12,56;UBERON:0006241,2.10e-12,56;UBERON:0007135,2.10e-12,56;UBERON:0010314,5.83e-12,132;UBERON:0003296,1.61e-11,4;UBERON:0010133,1.61e-11,4;UBERON:0003075,3.11e-11,82;UBERON:0007284,3.11e-11,82;UBERON:0002346,1.93e-10,86;UBERON:0004733,8.24e-10,12;UBERON:0002028,8.24e-10,12;UBERON:0007277,8.24e-10,12;UBERON:0006947,3.41e-09,3;UBERON:0004054,3.41e-09,3;UBERON:0000955,3.49e-09,68;UBERON:0006238,3.49e-09,68;UBERON:0004732,5.73e-09,13;UBERON:0003135,3.10e-08,11;UBERON:0001017,7.43e-08,81;UBERON:0002037,1.04e-07,6;UBERON:0006215,1.04e-07,6;UBERON:0010371,1.16e-07,104;UBERON:0003076,1.27e-07,15;UBERON:0003057,1.27e-07,15;UBERON:0001016,2.09e-07,89;UBERON:0002680,2.81e-07,9;UBERON:0001895,2.81e-07,9;UBERON:0010092,2.81e-07,9;UBERON:0002780,5.54e-07,41;UBERON:0001890,5.54e-07,41;UBERON:0003080,5.54e-07,41;UBERON:0006240,5.54e-07,41;UBERON:0005904,5.77e-07,4;UBERON:0000007,7.64e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0.408001382488506,1.25381888591235,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.80719576192283,2.50668955317945,1.44846518960824,0.795285947051099,5.83961844363163,0.756278537312543,0.443458794925128,0.175669571386252,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,1.06748995729705,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0,0,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0.757301322732344,0.0920498986422993,0.646584227275248,0.710019185033229,0,0,0,0,0,0,0,0.232387885739037,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,1.15930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.812839312631559,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89996871767898,1.31717957183961,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,2.98871982376605,1.65770349318689,0.503865495708552,0,0,0,0,0,0,1.7755813014648,0,0,0,0.463840490809256,0,0,0,1.44999915086959,0,0,0,0,0,0.347249989866585,0,0.723578631752448,18.30980835805,36.0488387375792,13.5951904718632,0.87754158861589,0.10893846351899,0,8.07977714289869,0,0,0.359030577639089,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.973033209536731,1.22206028986725,0,0,0,1.21322039365219,1.60515529459758,0,0,0,0,2.76209081994573,0,0.30607276163049,1.0741718536843,0.150323419414493,0.103688191397247,0,0,0,0,1.13843818411917,0,0,0,0,4.54289337429278,0,0,0,0,1.26085721434945,2.82419605412801,2.25980740780532,0.274083849293502,0,1.13959432720582,0.391102765469606,0.0801588202515337,1.70762395791482,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.418411385249333,0.203996435272644,0.577901179803038,0.600420288709789,0.136905378891993,0,0,0,4.46851842035607,5.27068975226872,0,3.59422200898184,6.00916467391199,4.24025769139558,4.16537529417703,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,1.5476039091159,1.27574068981852,0,0.0788057072991982,0.786818822024972,0,0,0,2.85878130549347,1.32418394073086,0,0.542999601753713,0,0,0,0,0.340776043570843,0,0,0,0.646414781807753,0.66116300871345,0,0,0.320362237703084,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.976210119215705,1.8778639605975,0,2.10765197920019,1.30402446176905,0,0.124980407962107,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0.50313580350515,3.55924488638614,0,0.604923695052956,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0.219284049578707,0.353378291891762,0,0,0.512483037175893,1.0362910251936,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0.127894371303652,1.1860729253635,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0,0.578063025868136,1.41696576325585,1.27707087245721,0.82046545696302,0,1.03735878696327,0.645902582527404,0,0,0,0,0,0,1.3807198521202,0,1.20336525358812,0,0,0,0,0.147856086217045,0.87798860003913,0,0.620060389503552,1.64881106504158,0,0,2.48105589194647,0,0,2.14280734351315,3.69912094440706,4.85572483389305,6.82986574053893,0.266107110487916,0,0,1.15548546060614,0.986591603442736,0,0,4.23862701392776,0,0,5.47895232305697,0.647782773655864,0,6.36141243172241,0.158013611732727,0.813689977576877,0,0.801711364730253,0,2.21934020222135,4.14755797088455,0.430227358820278,0,0,7.19757985324579,0,0,0,0,0,0,0,0.102662806856247,2.3196288626764,0.971421986118279,0,0,0,0,0,0.754814217833368,0.231522474323834,0,0,3.18692818280077,0,0.981542335574726,0.891139200981258,0.4226557275834,0,0,0.128915775947154,0,0,0,0,1.46067277649303,0,0.286679166302903,0,1.29183831362738,0.872701380680755,0.5290268405154,0.371995018166751,0.924351257262837,0.432626562123789,0,0,0,0.203977659483963,0,0.918948995348449,0,2.04602485189246,1.60778478093707,0,0.620597975171371,3.83821167421766,2.85677317756488,0.129177819672012,0,0.224263725161227,3.24600507218641,5.86139847978836,2.61260097476354,2.39563310759697,0.875576689189638,0.143444410785353,0,0,0,0,0,2.34640942403454,2.44482888365733,4.06896178315738,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0.408001382488506,1.25381888591235,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.80719576192283,2.50668955317945,1.44846518960824,0.795285947051099,5.83961844363163,0.756278537312543,0.443458794925128,0.175669571386252,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,1.06748995729705,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0,0,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0.757301322732344,0.0920498986422993,0.646584227275248,0.710019185033229,0,0,0,0,0,0,0,0.232387885739037,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,1.15930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.812839312631559,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89996871767898,1.31717957183961,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,2.98871982376605,1.65770349318689,0.503865495708552,0,0,0,0,0,0,1.7755813014648,0,0,0,0.463840490809256,0,0,0,1.44999915086959,0,0,0,0,0,0.347249989866585,0,0.723578631752448,18.30980835805,36.0488387375792,13.5951904718632,0.87754158861589,0.10893846351899,0,8.07977714289869,0,0,0.359030577639089,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.973033209536731,1.22206028986725,0,0,0,1.21322039365219,1.60515529459758,0,0,0,0,2.76209081994573,0,0.30607276163049,1.0741718536843,0.150323419414493,0.103688191397247,0,0,0,0,1.13843818411917,0,0,0,0,4.54289337429278,0,0,0,0,1.26085721434945,2.82419605412801,2.25980740780532,0.274083849293502,0,1.13959432720582,0.391102765469606,0.0801588202515337,1.70762395791482,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.418411385249333,0.203996435272644,0.577901179803038,0.600420288709789,0.136905378891993,0,0,0,4.46851842035607,5.27068975226872,0,3.59422200898184,6.00916467391199,4.24025769139558,4.16537529417703,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,1.5476039091159,1.27574068981852,0,0.0788057072991982,0.786818822024972,0,0,0,2.85878130549347,1.32418394073086,0,0.542999601753713,0,0,0,0,0.340776043570843,0,0,0,0.646414781807753,0.66116300871345,0,0,0.320362237703084,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.976210119215705,1.8778639605975,0,2.10765197920019,1.30402446176905,0,0.124980407962107,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0.50313580350515,3.55924488638614,0,0.604923695052956,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0.219284049578707,0.353378291891762,0,0,0.512483037175893,1.0362910251936,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0.127894371303652,1.1860729253635,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0,0.578063025868136,1.41696576325585,1.27707087245721,0.82046545696302,0,1.03735878696327,0.645902582527404,0,0,0,0,0,0,1.3807198521202,0,1.20336525358812,0,0,0,0,0.147856086217045,0.87798860003913,0,0.620060389503552,1.64881106504158,0,0,2.48105589194647,0,0,2.14280734351315,3.69912094440706,4.85572483389305,6.82986574053893,0.266107110487916,0,0,1.15548546060614,0.986591603442736,0,0,4.23862701392776,0,0,5.47895232305697,0.647782773655864,0,6.36141243172241,0.158013611732727,0.813689977576877,0,0.801711364730253,0,2.21934020222135,4.14755797088455,0.430227358820278,0,0,7.19757985324579,0,0,0,0,0,0,0,0.102662806856247,2.3196288626764,0.971421986118279,0,0,0,0,0,0.754814217833368,0.231522474323834,0,0,3.18692818280077,0,0.981542335574726,0.891139200981258,0.4226557275834,0,0,0.128915775947154,0,0,0,0,1.46067277649303,0,0.286679166302903,0,1.29183831362738,0.872701380680755,0.5290268405154,0.371995018166751,0.924351257262837,0.432626562123789,0,0,0,0.203977659483963,0,0.918948995348449,0,2.04602485189246,1.60778478093707,0,0.620597975171371,3.83821167421766,2.85677317756488,0.129177819672012,0,0.224263725161227,3.24600507218641,5.86139847978836,2.61260097476354,2.39563310759697,0.875576689189638,0.143444410785353,0,0,0,0,0,2.34640942403454,2.44482888365733,4.06896178315738,0.665756774185513,0.201273793591026,0 | ||
|short_description=p@chr11:133821941..133821975,- | |||
}} | }} |
Latest revision as of 20:09, 23 July 2015
Short description: | p@chr11:133821941..133821975, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:133821941..133821975, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 3.39e-13 | 9 |
carbohydrate secreting cell | 3.39e-13 | 9 |
chondroblast | 7.24e-11 | 6 |
chondrocyte | 7.24e-11 | 6 |
extracellular matrix secreting cell | 1.79e-07 | 15 |