FFCP PHASE1:Hg19::chr19:49121124..49121145,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6141 | |EntrezGene=6141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10310 | |HGNC=10310 | ||
|TSSclassifier=strong | |||
|UniProt=Q07020,Q0QEW2 | |UniProt=Q07020,Q0QEW2 | ||
|association_with_transcript=0bp_to_ENST00000084795,uc002pjp.1_5end | |association_with_transcript=0bp_to_ENST00000084795,uc002pjp.1_5end | ||
|cluster_id=chr19:49121124..49121145,- | |||
|description=CAGE_peak_2_at_RPL18_5end | |description=CAGE_peak_2_at_RPL18_5end | ||
|id=chr19:49121124..49121145,- | |id=chr19:49121124..49121145,- | ||
|ontology_enrichment_celltype=CL:0002321!6.08e-10!248;CL:0000012!6.49e-10!682;CL:0000220!7.69e-10!246;CL:0000548!9.28e-10!679;CL:0000004!9.28e-10!679;CL:0000255!9.28e-10!679;CL:0002371!3.56e-09!591;CL:0000144!5.64e-09!625;CL:0000003!3.18e-08!722;CL:0000192!2.47e-07!42;CL:0000514!2.47e-07!42;CL:0000222!8.63e-07!119;CL:0000183!9.32e-07!59 | |ontology_enrichment_celltype=CL:0002321!6.08e-10!248;CL:0000012!6.49e-10!682;CL:0000220!7.69e-10!246;CL:0000548!9.28e-10!679;CL:0000004!9.28e-10!679;CL:0000255!9.28e-10!679;CL:0002371!3.56e-09!591;CL:0000144!5.64e-09!625;CL:0000003!3.18e-08!722;CL:0000192!2.47e-07!42;CL:0000514!2.47e-07!42;CL:0000222!8.63e-07!119;CL:0000183!9.32e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.16e-09,250;CL:0000393,9.79e-08,61;CL:0000211,9.79e-08,61;CL:0000192,1.27e-07,43;CL:0000514,1.27e-07,43;CL:0000359,3.52e-07,32;CL:0000680,7.84e-07,58;CL:0000056,7.84e-07,58;CL:0000355,7.84e-07,58;CL:0000222,8.33e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!1.91e-07!138 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,4.96e-09,148;UBERON:0007503,2.26e-08,78;UBERON:0005256,2.14e-07,122;UBERON:0002329,7.01e-07,71;UBERON:0003059,7.01e-07,71;UBERON:0007282,7.01e-07,71;UBERON:0004290,7.01e-07,71;UBERON:0009618,7.01e-07,71 | |||
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| ||
|short_description=p2@RPL18 | |short_description=p2@RPL18 | ||
}} | }} |
Latest revision as of 03:13, 19 September 2015
Short description: | p2@RPL18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000084795, uc002pjp.1_5end |
EntrezGene: | RPL18 |
HGNC: | 10310 |
UniProt: | Q07020Q0QEW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.16e-09 | 250 |
electrically responsive cell | 9.79e-08 | 61 |
electrically active cell | 9.79e-08 | 61 |
smooth muscle cell | 1.27e-07 | 43 |
smooth muscle myoblast | 1.27e-07 | 43 |
vascular associated smooth muscle cell | 3.52e-07 | 32 |
muscle precursor cell | 7.84e-07 | 58 |
myoblast | 7.84e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.84e-07 | 58 |
mesodermal cell | 8.33e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 4.96e-09 | 148 |
epithelial vesicle | 2.26e-08 | 78 |
trunk mesenchyme | 2.14e-07 | 122 |
somite | 7.01e-07 | 71 |
presomitic mesoderm | 7.01e-07 | 71 |
presumptive segmental plate | 7.01e-07 | 71 |
dermomyotome | 7.01e-07 | 71 |
trunk paraxial mesoderm | 7.01e-07 | 71 |