FFCP PHASE1:Hg19::chr14:24042111..24042131,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84502 | |EntrezGene=84502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20156 | |HGNC=20156 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z967 | |UniProt=B7Z967 | ||
|association_with_transcript=78bp_to_AK304514_5end | |association_with_transcript=78bp_to_AK304514_5end | ||
|cluster_id=chr14:24042111..24042131,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_17_at_JPH4_5end | |description=CAGE_peak_17_at_JPH4_5end | ||
|id=chr14:24042111..24042131,- | |id=chr14:24042111..24042131,- | ||
|ontology_enrichment_celltype=CL:0000839!7.19e-48!70;CL:0000766!9.60e-46!76;CL:0000557!1.47e-44!71;CL:0002194!1.16e-37!63;CL:0000576!1.16e-37!63;CL:0000040!1.16e-37!63;CL:0000559!1.16e-37!63;CL:0000763!2.21e-37!112;CL:0000049!2.21e-37!112;CL:0002009!3.48e-36!65;CL:0002057!3.63e-36!42;CL:0000860!3.56e-33!45;CL:0002031!2.02e-24!124;CL:0002032!3.03e-23!165;CL:0000837!3.03e-23!165;CL:0000037!8.52e-23!172;CL:0000566!8.52e-23!172;CL:0000738!1.00e-22!140;CL:0000988!9.29e-21!182;CL:0002087!1.66e-18!119;CL:0002274!2.59e-13!5;CL:0000457!2.59e-13!5;CL:0002191!2.59e-13!5;CL:0000097!2.59e-13!5;CL:0000831!2.59e-13!5;CL:0002028!2.59e-13!5;CL:0002619!4.86e-08!3;CL:0000163!4.02e-07!9 | |ontology_enrichment_celltype=CL:0000839!7.19e-48!70;CL:0000766!9.60e-46!76;CL:0000557!1.47e-44!71;CL:0002194!1.16e-37!63;CL:0000576!1.16e-37!63;CL:0000040!1.16e-37!63;CL:0000559!1.16e-37!63;CL:0000763!2.21e-37!112;CL:0000049!2.21e-37!112;CL:0002009!3.48e-36!65;CL:0002057!3.63e-36!42;CL:0000860!3.56e-33!45;CL:0002031!2.02e-24!124;CL:0002032!3.03e-23!165;CL:0000837!3.03e-23!165;CL:0000037!8.52e-23!172;CL:0000566!8.52e-23!172;CL:0000738!1.00e-22!140;CL:0000988!9.29e-21!182;CL:0002087!1.66e-18!119;CL:0002274!2.59e-13!5;CL:0000457!2.59e-13!5;CL:0002191!2.59e-13!5;CL:0000097!2.59e-13!5;CL:0000831!2.59e-13!5;CL:0002028!2.59e-13!5;CL:0002619!4.86e-08!3;CL:0000163!4.02e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.89e-83;5!CL:0000163;2.34e-46;9!CL:0002619;1.00e-22;3!CL:0000766;2.94e-12;69!CL:0000235;4.94e-12;6!CL:0000151;8.30e-11;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.89e-83,5;CL:0002028,3.89e-83,5;CL:0000163,2.34e-46,9;CL:0000839,6.10e-24,66;CL:0000557,1.40e-23,67;CL:0002619,8.04e-23,3;CL:0000766,6.43e-22,72;CL:0000763,1.60e-17,108;CL:0000049,1.60e-17,108;CL:0002031,6.34e-13,120;CL:0000235,5.08e-12,6;CL:0000151,1.05e-11,36;CL:0002032,1.66e-11,161;CL:0000837,1.66e-11,161;CL:0000738,2.56e-11,136;CL:0000037,5.44e-11,168;CL:0000988,2.18e-10,177;CL:0002194,6.89e-07,59;CL:0000576,6.89e-07,59;CL:0000040,6.89e-07,59;CL:0000559,6.89e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.79e-40!80;UBERON:0002390!1.92e-37!102;UBERON:0003061!1.92e-37!102;UBERON:0001474!1.28e-36!86;UBERON:0002193!1.59e-34!112;UBERON:0004765!4.10e-31!101;UBERON:0001434!4.10e-31!101;UBERON:0002405!1.90e-28!115;UBERON:0007023!1.18e-15!115;UBERON:0002204!6.23e-15!167;UBERON:0003081!4.70e-14!216;UBERON:0000062!1.14e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.12e-17;1!UBERON:0006518;1.12e-17;1!UBERON:0008949;1.12e-17;1!UBERON:0000101;1.12e-17;1!UBERON:0002167;1.12e-17;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.61e-21,76;UBERON:0001474,3.41e-19,82;UBERON:0002171,7.37e-18,1;UBERON:0006518,7.37e-18,1;UBERON:0008949,7.37e-18,1;UBERON:0000101,7.37e-18,1;UBERON:0002167,7.37e-18,1;UBERON:0004765,1.93e-17,90;UBERON:0002405,7.33e-17,93;UBERON:0002390,5.68e-16,98;UBERON:0003061,5.68e-16,98;UBERON:0001434,1.22e-15,100;UBERON:0002193,1.95e-14,108;UBERON:0002204,4.56e-09,167;UBERON:0003081,2.66e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.928896739896456,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0.223915474239924,1.6194683300949,1.54545340580512,0.290796477559129,0.377875943688809,0.485168122375632,0.232429036905685,1.23350366406548,0.309706370895104,0,0.512321413058201,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0.918251677112708,0.320929027076094,0,0,0.398927315243264,0,0.580418477257168,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0.736555271975129,0.632924774881769,0.211255286311942,0.212604299965044,0,0.44931452458598,0.300353785683013,0.803627933485401,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18568910348575,0.234004265139238,1.48631162288728,0,0,0,0,0,0,2.46331618947972,5.37095447480679,5.80518723514162,3.02651902175619,3.53478813593864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,1.12318871245384,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.533937062838473,0,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.928896739896456,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0.223915474239924,1.6194683300949,1.54545340580512,0.290796477559129,0.377875943688809,0.485168122375632,0.232429036905685,1.23350366406548,0.309706370895104,0,0.512321413058201,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0.918251677112708,0.320929027076094,0,0,0.398927315243264,0,0.580418477257168,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0.736555271975129,0.632924774881769,0.211255286311942,0.212604299965044,0,0.44931452458598,0.300353785683013,0.803627933485401,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18568910348575,0.234004265139238,1.48631162288728,0,0,0,0,0,0,2.46331618947972,5.37095447480679,5.80518723514162,3.02651902175619,3.53478813593864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,1.12318871245384,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.533937062838473,0,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@JPH4 | |short_description=p17@JPH4 | ||
}} | }} |
Latest revision as of 12:14, 19 September 2015
Short description: | p17@JPH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_JPH4_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 78bp_to_AK304514_5end |
EntrezGene: | JPH4 |
HGNC: | 20156 |
UniProt: | B7Z967 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.89e-83 | 5 |
basophil mast progenitor cell | 3.89e-83 | 5 |
endocrine cell | 2.34e-46 | 9 |
myeloid lineage restricted progenitor cell | 6.10e-24 | 66 |
granulocyte monocyte progenitor cell | 1.40e-23 | 67 |
adult endothelial progenitor cell | 8.04e-23 | 3 |
myeloid leukocyte | 6.43e-22 | 72 |
myeloid cell | 1.60e-17 | 108 |
common myeloid progenitor | 1.60e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 6.34e-13 | 120 |
macrophage | 5.08e-12 | 6 |
secretory cell | 1.05e-11 | 36 |
hematopoietic oligopotent progenitor cell | 1.66e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-11 | 161 |
leukocyte | 2.56e-11 | 136 |
hematopoietic stem cell | 5.44e-11 | 168 |
hematopoietic cell | 2.18e-10 | 177 |
monopoietic cell | 6.89e-07 | 59 |
monocyte | 6.89e-07 | 59 |
monoblast | 6.89e-07 | 59 |
promonocyte | 6.89e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.61e-21 | 76 |
bone element | 3.41e-19 | 82 |
lower lobe of right lung | 7.37e-18 | 1 |
right lung lobe | 7.37e-18 | 1 |
lower lobe of lung | 7.37e-18 | 1 |
lobe of lung | 7.37e-18 | 1 |
right lung | 7.37e-18 | 1 |
skeletal element | 1.93e-17 | 90 |
immune system | 7.33e-17 | 93 |
hematopoietic system | 5.68e-16 | 98 |
blood island | 5.68e-16 | 98 |
skeletal system | 1.22e-15 | 100 |
hemolymphoid system | 1.95e-14 | 108 |
musculoskeletal system | 4.56e-09 | 167 |
lateral plate mesoderm | 2.66e-07 | 203 |