FFCP PHASE1:Hg19::chr14:23865526..23865550,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:23865526..23865550,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr14:23865526..23865550,- | |description=CAGE_peak_at_chr14:23865526..23865550,- | ||
|id=chr14:23865526..23865550,- | |id=chr14:23865526..23865550,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.78e-26;1!UBERON:0000358;5.93e-26;1!UBERON:0004140;9.79e-26;1!UBERON:0005062;1.43e-25;4!UBERON:0007284;1.43e-25;4 | |||
|ontology_enrichment_disease=DOID:114!7.15e-24!2;DOID:178!8.85e-13!1;DOID:326!8.85e-13!1;DOID:3978!8.85e-13!1;DOID:3394!8.85e-13!1;DOID:5844!8.85e-13!1;DOID:1287!1.97e-12!4 | |ontology_enrichment_disease=DOID:114!7.15e-24!2;DOID:178!8.85e-13!1;DOID:326!8.85e-13!1;DOID:3978!8.85e-13!1;DOID:3394!8.85e-13!1;DOID:5844!8.85e-13!1;DOID:1287!1.97e-12!4 | ||
|ontology_enrichment_disease_v019=DOID:114;1.14e-50;2!DOID:178;3.58e-26;1!DOID:326;3.58e-26;1!DOID:3978;3.58e-26;1!DOID:3394;3.58e-26;1!DOID:5844;3.58e-26;1!DOID:1287;5.94e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.14e-50,2;DOID:178,3.58e-26,1;DOID:326,3.58e-26,1;DOID:3978,3.58e-26,1;DOID:3394,3.58e-26,1;DOID:5844,3.58e-26,1;DOID:1287,5.94e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0003978!4.82e-34!3;UBERON:0009751!4.82e-34!3;UBERON:0000946!4.82e-34!3;UBERON:0002523!4.82e-34!3;UBERON:0005983!4.82e-34!3;UBERON:0002165!4.82e-34!3;UBERON:0002062!4.82e-34!3;UBERON:0007280!4.82e-34!3;UBERON:0004151!7.56e-34!3;UBERON:0007100!1.67e-32!27;UBERON:0002081!2.23e-23!2;UBERON:0002133!2.79e-23!2;UBERON:0001630!7.65e-23!2;UBERON:0005090!7.65e-23!2;UBERON:0003103!4.39e-18!69;UBERON:0000948!2.01e-16!24;UBERON:0005498!2.01e-16!24;UBERON:0004140!2.01e-16!24;UBERON:0009881!2.01e-16!24;UBERON:0004141!2.01e-16!24;UBERON:0003084!2.01e-16!24;UBERON:0007005!2.01e-16!24;UBERON:0004139!2.01e-16!24;UBERON:0004291!2.01e-16!24;UBERON:0007023!2.08e-14!115;UBERON:0002079!7.89e-13!1;UBERON:0002135!9.92e-13!1;UBERON:0002146!1.40e-12!1;UBERON:0005623!1.40e-12!1;UBERON:0007029!1.96e-12!1;UBERON:0002426!2.20e-12!1;UBERON:0003831!2.20e-12!1;UBERON:0003898!2.20e-12!1;UBERON:0004830!2.20e-12!1;UBERON:0001774!2.20e-12!1;UBERON:0003830!2.20e-12!1;UBERON:0005175!2.20e-12!1;UBERON:0003897!2.20e-12!1;UBERON:0001103!2.20e-12!1;UBERON:0010084!2.20e-12!1;UBERON:0002134!2.46e-12!1;UBERON:0005208!2.46e-12!1;UBERON:0005946!2.46e-12!1;UBERON:0005965!2.46e-12!1;UBERON:0002078!2.46e-12!1;UBERON:0002084!2.75e-12!1;UBERON:0002082!2.75e-12!1;UBERON:0004706!2.75e-12!1;UBERON:0005418!3.08e-12!1;UBERON:0001389!3.08e-12!1;UBERON:0000026!3.08e-12!1;UBERON:0008784!3.08e-12!1;UBERON:0006058!3.08e-12!1;UBERON:0003663!3.08e-12!1;UBERON:0001383!3.08e-12!1;UBERON:0004256!3.08e-12!1;UBERON:0002529!3.08e-12!1;UBERON:0004708!3.08e-12!1;UBERON:0002101!3.08e-12!1;UBERON:0004709!3.08e-12!1;UBERON:0003661!3.08e-12!1;UBERON:0002471!3.08e-12!1;UBERON:0004357!3.08e-12!1;UBERON:0009872!3.08e-12!1;UBERON:0004347!3.08e-12!1;UBERON:0005420!3.08e-12!1;UBERON:0005732!3.08e-12!1;UBERON:0006057!3.08e-12!1;UBERON:0000978!3.08e-12!1;UBERON:0002103!3.08e-12!1;UBERON:0001665!3.08e-12!1;UBERON:0003823!3.08e-12!1;UBERON:0000154!3.08e-12!1;UBERON:0005733!3.08e-12!1;UBERON:0005730!3.08e-12!1;UBERON:0001009!1.48e-08!113;UBERON:0002342!9.24e-08!14;UBERON:0005062!9.24e-08!14;UBERON:0003127!7.20e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.08e-48;25!UBERON:0003978;1.08e-33;3!UBERON:0000946;1.08e-33;3!UBERON:0002079;2.78e-26;1!UBERON:0002135;4.61e-26;1!UBERON:0002146;9.79e-26;1!UBERON:0005623;9.79e-26;1!UBERON:0000948;2.09e-18;22!UBERON:0002081;7.30e-14;2!UBERON:0002133;9.40e-14;2!UBERON:0003103;9.25e-12;61!UBERON:0010313;7.30e-11;10!UBERON:0004151;1.10e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.09e-44,27;UBERON:0003978,1.08e-33,3;UBERON:0009751,1.08e-33,3;UBERON:0000946,1.08e-33,3;UBERON:0002523,1.08e-33,3;UBERON:0005983,1.08e-33,3;UBERON:0002165,1.08e-33,3;UBERON:0002062,1.08e-33,3;UBERON:0007280,1.08e-33,3;UBERON:0002079,2.78e-26,1;UBERON:0002135,4.61e-26,1;UBERON:0002146,9.79e-26,1;UBERON:0005623,9.79e-26,1;UBERON:0003103,7.24e-18,68;UBERON:0000948,6.17e-17,24;UBERON:0005498,6.17e-17,24;UBERON:0004140,6.17e-17,24;UBERON:0009881,6.17e-17,24;UBERON:0004141,6.17e-17,24;UBERON:0003084,6.17e-17,24;UBERON:0007005,6.17e-17,24;UBERON:0004139,6.17e-17,24;UBERON:0004291,6.17e-17,24;UBERON:0004797,4.37e-15,7;UBERON:0002081,7.30e-14,2;UBERON:0010227,7.30e-14,2;UBERON:0002133,9.40e-14,2;UBERON:0001009,7.30e-11,112;UBERON:0010313,7.30e-11,10;UBERON:0002342,7.30e-11,10;UBERON:0005062,7.30e-11,10;UBERON:0004151,1.10e-09,3;UBERON:0007023,6.31e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.7748840445289,1.14580212005842,0.717873024576814,15.3752830384223,46.3564131987496,1.11585728720936,1.2764859772478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4379925065874,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0.435433495793923,0,0,0,0.99798106963804,0,0,0,0,4.69281884806909,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.7748840445289,1.14580212005842,0.717873024576814,15.3752830384223,46.3564131987496,1.11585728720936,1.2764859772478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4379925065874,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0.435433495793923,0,0,0,0.99798106963804,0,0,0,0,4.69281884806909,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr14:23865526..23865550,- | |short_description=p@chr14:23865526..23865550,- | ||
}} | }} |
Latest revision as of 19:32, 24 July 2015
Short description: | p@chr14:23865526..23865550, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:23865526..23865550, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.09e-44 | 27 |
valve | 1.08e-33 | 3 |
cardiac mesenchyme | 1.08e-33 | 3 |
cardial valve | 1.08e-33 | 3 |
tunica intima | 1.08e-33 | 3 |
heart layer | 1.08e-33 | 3 |
endocardium | 1.08e-33 | 3 |
endocardial cushion | 1.08e-33 | 3 |
presumptive endocardium | 1.08e-33 | 3 |
left cardiac atrium | 2.78e-26 | 1 |
mitral valve | 4.61e-26 | 1 |
pulmonary valve | 9.79e-26 | 1 |
semi-lunar valve | 9.79e-26 | 1 |
compound organ | 7.24e-18 | 68 |
heart | 6.17e-17 | 24 |
primitive heart tube | 6.17e-17 | 24 |
primary heart field | 6.17e-17 | 24 |
anterior lateral plate mesoderm | 6.17e-17 | 24 |
heart tube | 6.17e-17 | 24 |
heart primordium | 6.17e-17 | 24 |
cardiac mesoderm | 6.17e-17 | 24 |
cardiogenic plate | 6.17e-17 | 24 |
heart rudiment | 6.17e-17 | 24 |
blood vessel layer | 4.37e-15 | 7 |
cardiac atrium | 7.30e-14 | 2 |
future cardiac atrium | 7.30e-14 | 2 |
atrioventricular valve | 9.40e-14 | 2 |
circulatory system | 7.30e-11 | 112 |
neural crest-derived structure | 7.30e-11 | 10 |
neural crest | 7.30e-11 | 10 |
neural fold | 7.30e-11 | 10 |
cardiac chamber | 1.10e-09 | 3 |
adult organism | 6.31e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.14e-50 | 2 |
vascular disease | 3.58e-26 | 1 |
ischemia | 3.58e-26 | 1 |
extrinsic cardiomyopathy | 3.58e-26 | 1 |
myocardial ischemia | 3.58e-26 | 1 |
myocardial infarction | 3.58e-26 | 1 |
cardiovascular system disease | 5.94e-26 | 4 |