FFCP PHASE1:Hg19::chr19:47113027..47113062,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=808 | |EntrezGene=808 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1449 | |HGNC=1449 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_AL050207_5end | |association_with_transcript=27bp_to_AL050207_5end | ||
|cluster_id=chr19:47113027..47113062,+ | |||
|description=CAGE_peak_8_at_CALM3_5end | |description=CAGE_peak_8_at_CALM3_5end | ||
|id=chr19:47113027..47113062,+ | |id=chr19:47113027..47113062,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!8.75e-14!32;UBERON:0002619!3.08e-13!22;UBERON:0001017!5.13e-13!82;UBERON:0000955!8.57e-13!69;UBERON:0006238!8.57e-13!69;UBERON:0002020!8.72e-13!34;UBERON:0003528!8.72e-13!34;UBERON:0001049!2.29e-12!57;UBERON:0005068!2.29e-12!57;UBERON:0006241!2.29e-12!57;UBERON:0007135!2.29e-12!57;UBERON:0001893!2.64e-12!34;UBERON:0001950!2.96e-12!20;UBERON:0005743!4.03e-12!86;UBERON:0002616!6.19e-12!59;UBERON:0002791!7.54e-12!33;UBERON:0000956!1.37e-11!25;UBERON:0000203!1.37e-11!25;UBERON:0003080!2.37e-10!42;UBERON:0000073!3.19e-10!94;UBERON:0001016!3.19e-10!94;UBERON:0002780!6.29e-10!41;UBERON:0001890!6.29e-10!41;UBERON:0006240!6.29e-10!41;UBERON:0003075!1.18e-07!86;UBERON:0007284!1.18e-07!86;UBERON:0003056!3.24e-07!61;UBERON:0002346!5.00e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.04e-17;32!UBERON:0002619;3.46e-17;22!UBERON:0002791;5.58e-16;32!UBERON:0001950;1.19e-15;20!UBERON:0003528;1.43e-15;34!UBERON:0002020;1.43e-15;34!UBERON:0000956;1.98e-15;25!UBERON:0000203;1.98e-15;25!UBERON:0001893;6.88e-15;34!UBERON:0002780;1.89e-10;41!UBERON:0001890;1.89e-10;41!UBERON:0000073;3.11e-08;53!UBERON:0002616;3.11e-08;53!UBERON:0000955;1.52e-07;68!UBERON:0001017;1.83e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.28e-19,32;UBERON:0003528,1.31e-18,34;UBERON:0002020,1.31e-18,34;UBERON:0002619,7.51e-18,22;UBERON:0002791,9.41e-18,32;UBERON:0001893,1.47e-17,34;UBERON:0001049,4.63e-17,56;UBERON:0005068,4.63e-17,56;UBERON:0006241,4.63e-17,56;UBERON:0007135,4.63e-17,56;UBERON:0000073,1.73e-16,53;UBERON:0002616,1.73e-16,53;UBERON:0001950,2.12e-16,20;UBERON:0000956,6.28e-16,25;UBERON:0000203,6.28e-16,25;UBERON:0000955,3.72e-15,68;UBERON:0006238,3.72e-15,68;UBERON:0001017,4.45e-15,81;UBERON:0002780,4.60e-15,41;UBERON:0001890,4.60e-15,41;UBERON:0003080,4.60e-15,41;UBERON:0006240,4.60e-15,41;UBERON:0001016,1.34e-12,89;UBERON:0003075,3.99e-11,82;UBERON:0007284,3.99e-11,82;UBERON:0003056,5.07e-10,61;UBERON:0002346,6.35e-10,86;UBERON:0010371,6.63e-08,104 | |||
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| ||
|short_description=p8@CALM3 | |short_description=p8@CALM3 | ||
}} | }} |
Latest revision as of 21:08, 18 September 2015
Short description: | p8@CALM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CALM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_AL050207_5end |
EntrezGene: | CALM3 |
HGNC: | 1449 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 2.28e-19 | 32 |
brain grey matter | 1.31e-18 | 34 |
gray matter | 1.31e-18 | 34 |
regional part of cerebral cortex | 7.51e-18 | 22 |
regional part of telencephalon | 9.41e-18 | 32 |
telencephalon | 1.47e-17 | 34 |
neural tube | 4.63e-17 | 56 |
neural rod | 4.63e-17 | 56 |
future spinal cord | 4.63e-17 | 56 |
neural keel | 4.63e-17 | 56 |
regional part of nervous system | 1.73e-16 | 53 |
regional part of brain | 1.73e-16 | 53 |
neocortex | 2.12e-16 | 20 |
cerebral cortex | 6.28e-16 | 25 |
pallium | 6.28e-16 | 25 |
brain | 3.72e-15 | 68 |
future brain | 3.72e-15 | 68 |
central nervous system | 4.45e-15 | 81 |
regional part of forebrain | 4.60e-15 | 41 |
forebrain | 4.60e-15 | 41 |
anterior neural tube | 4.60e-15 | 41 |
future forebrain | 4.60e-15 | 41 |
nervous system | 1.34e-12 | 89 |
neural plate | 3.99e-11 | 82 |
presumptive neural plate | 3.99e-11 | 82 |
pre-chordal neural plate | 5.07e-10 | 61 |
neurectoderm | 6.35e-10 | 86 |
ecto-epithelium | 6.63e-08 | 104 |