FFCP PHASE1:Hg19::chr19:46476791..46476819,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4858 | |EntrezGene=4858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7887 | |HGNC=7887 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNW9 | |UniProt=Q9UNW9 | ||
|association_with_transcript=-134bp_to_ENST00000263257,NM_002516,uc002pdv.2_5end | |association_with_transcript=-134bp_to_ENST00000263257,NM_002516,uc002pdv.2_5end | ||
|cluster_id=chr19:46476791..46476819,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_NOVA2_5end | |description=CAGE_peak_1_at_NOVA2_5end | ||
|id=chr19:46476791..46476819,- | |id=chr19:46476791..46476819,- | ||
|ontology_enrichment_celltype=CL:0002139!3.65e-19!24;CL:0000115!1.29e-17!35;CL:0000071!1.32e-15!18;CL:0002546!1.32e-15!18;CL:0002078!4.21e-14!44;CL:0000213!1.48e-09!57;CL:0000215!1.48e-09!57;CL:1000413!8.76e-09!9;CL:0002319!8.06e-08!25;CL:0000047!3.47e-07!8 | |ontology_enrichment_celltype=CL:0002139!3.65e-19!24;CL:0000115!1.29e-17!35;CL:0000071!1.32e-15!18;CL:0002546!1.32e-15!18;CL:0002078!4.21e-14!44;CL:0000213!1.48e-09!57;CL:0000215!1.48e-09!57;CL:1000413!8.76e-09!9;CL:0002319!8.06e-08!25;CL:0000047!3.47e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.56e-24;24!CL:0000071;2.72e-19;18!CL:0000115;3.39e-19;36!CL:1000413;1.10e-10;9!CL:0002078;1.79e-10;45!CL:0002544;1.57e-07;6!CL:0002543;4.57e-07;6!CL:0000213;5.58e-07;58!CL:0000215;5.58e-07;58!CL:0000540;7.77e-07;6!CL:0000404;7.77e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.17e-24,24;CL:0000115,8.82e-23,36;CL:0000071,2.36e-19,18;CL:0002546,2.36e-19,18;CL:0002078,6.86e-16,45;CL:1000413,1.03e-10,9;CL:0000213,5.76e-10,58;CL:0000215,5.76e-10,58;CL:0000047,1.08e-08,8;CL:0002544,1.58e-07,6;CL:0002543,4.30e-07,6;CL:0000540,8.66e-07,6;CL:0000031,8.66e-07,6;CL:0000404,8.66e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.72e-19;18!UBERON:0006601;7.25e-12;82!CL:0000031;7.77e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-47!115;UBERON:0001017!7.31e-46!82;UBERON:0000025!8.86e-46!194;UBERON:0005743!1.15e-43!86;UBERON:0000073!3.44e-43!94;UBERON:0001016!3.44e-43!94;UBERON:0004111!1.10e-41!241;UBERON:0001049!3.86e-39!57;UBERON:0005068!3.86e-39!57;UBERON:0006241!3.86e-39!57;UBERON:0007135!3.86e-39!57;UBERON:0000955!1.35e-36!69;UBERON:0006238!1.35e-36!69;UBERON:0000477!2.81e-35!286;UBERON:0003075!2.03e-34!86;UBERON:0007284!2.03e-34!86;UBERON:0002346!1.46e-33!90;UBERON:0002616!1.03e-32!59;UBERON:0003080!3.65e-31!42;UBERON:0002780!1.37e-30!41;UBERON:0001890!1.37e-30!41;UBERON:0006240!1.37e-30!41;UBERON:0001893!3.39e-26!34;UBERON:0002020!4.76e-26!34;UBERON:0003528!4.76e-26!34;UBERON:0002791!1.81e-25!33;UBERON:0001869!1.20e-24!32;UBERON:0000483!1.87e-24!309;UBERON:0000119!4.28e-24!312;UBERON:0004121!6.42e-24!169;UBERON:0000055!8.12e-24!69;UBERON:0000924!8.41e-24!173;UBERON:0006601!8.41e-24!173;UBERON:0003056!8.26e-23!61;UBERON:0001981!2.05e-21!60;UBERON:0007500!2.05e-21!60;UBERON:0004537!2.05e-21!60;UBERON:0006965!2.05e-21!60;UBERON:0004872!2.44e-21!84;UBERON:0002049!3.36e-21!79;UBERON:0007798!3.36e-21!79;UBERON:0000153!9.77e-20!129;UBERON:0007811!9.77e-20!129;UBERON:0000956!1.42e-19!25;UBERON:0000203!1.42e-19!25;UBERON:0000033!2.31e-19!123;UBERON:0002619!1.90e-18!22;UBERON:0001009!4.46e-18!113;UBERON:0001950!5.92e-17!20;UBERON:0004535!7.52e-17!110;UBERON:0001986!1.32e-15!18;UBERON:0004638!1.32e-15!18;UBERON:0004852!1.32e-15!18;UBERON:0000468!2.04e-15!659;UBERON:0000922!2.70e-15!612;UBERON:0000467!1.53e-14!625;UBERON:0003914!2.08e-14!118;UBERON:0000480!2.16e-14!626;UBERON:0001637!5.20e-13!42;UBERON:0003509!5.20e-13!42;UBERON:0004572!5.20e-13!42;UBERON:0002050!1.39e-12!605;UBERON:0005423!1.39e-12!605;UBERON:0000923!2.88e-12!604;UBERON:0005291!2.88e-12!604;UBERON:0006598!2.88e-12!604;UBERON:0002532!2.88e-12!604;UBERON:0000487!3.61e-12!22;UBERON:0000481!4.35e-12!347;UBERON:0006914!2.22e-11!25;UBERON:0004573!1.60e-10!33;UBERON:0004571!1.60e-10!33;UBERON:0000475!4.26e-10!365;UBERON:0003076!4.42e-09!15;UBERON:0003057!4.42e-09!15;UBERON:0003915!8.76e-09!9;UBERON:0004700!8.76e-09!9;UBERON:0001917!8.76e-09!9;UBERON:0000064!1.06e-08!219;UBERON:0000947!3.12e-08!21;UBERON:0010191!3.12e-08!21;UBERON:0002420!5.07e-08!9;UBERON:0007245!5.07e-08!9;UBERON:0010009!5.07e-08!9;UBERON:0010011!5.07e-08!9;UBERON:0000454!5.07e-08!9;UBERON:0004732!6.14e-08!13;UBERON:0002308!6.67e-08!9;UBERON:0000125!6.67e-08!9;UBERON:0001871!3.73e-07!7;UBERON:0004733!3.76e-07!12;UBERON:0002028!3.76e-07!12;UBERON:0007277!3.76e-07!12;UBERON:0007100!6.22e-07!27;UBERON:0003103!8.87e-07!69 | |||
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| ||
|short_description=p1@NOVA2 | |short_description=p1@NOVA2 | ||
}} | }} |
Latest revision as of 19:45, 18 September 2015
Short description: | p1@NOVA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOVA2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -134bp_to_ENST00000263257, NM_002516, uc002pdv.2_5end |
EntrezGene: | NOVA2 |
HGNC: | 7887 |
UniProt: | Q9UNW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.17e-24 | 24 |
endothelial cell | 8.82e-23 | 36 |
blood vessel endothelial cell | 2.36e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.36e-19 | 18 |
meso-epithelial cell | 6.86e-16 | 45 |
endothelial cell of artery | 1.03e-10 | 9 |
lining cell | 5.76e-10 | 58 |
barrier cell | 5.76e-10 | 58 |
neuronal stem cell | 1.08e-08 | 8 |
aortic endothelial cell | 1.58e-07 | 6 |
vein endothelial cell | 4.30e-07 | 6 |
neuron | 8.66e-07 | 6 |
neuroblast | 8.66e-07 | 6 |
electrically signaling cell | 8.66e-07 | 6 |