FFCP PHASE1:Hg19::chr14:106320631..106320646,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3507 | |EntrezGene=3507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5541 | |HGNC=5541 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-130bp_to_J00258_5end | |association_with_transcript=-130bp_to_J00258_5end | ||
|cluster_id=chr14:106320631..106320646,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_9_at_IGHM_5end | |description=CAGE_peak_9_at_IGHM_5end | ||
|id=chr14:106320631..106320646,- | |id=chr14:106320631..106320646,- | ||
|ontology_enrichment_celltype=CL:0000945!1.66e-66!24;CL:0000826!1.66e-66!24;CL:0000236!4.29e-38!14;CL:0000542!5.57e-33!53;CL:0000051!5.57e-33!53;CL:0000838!1.66e-30!52;CL:0002087!9.07e-14!119;CL:0000738!5.53e-12!140;CL:0000037!2.31e-11!172;CL:0000566!2.31e-11!172;CL:0002032!4.06e-11!165;CL:0000837!4.06e-11!165;CL:0002031!1.46e-10!124;CL:0000988!2.29e-10!182 | |ontology_enrichment_celltype=CL:0000945!1.66e-66!24;CL:0000826!1.66e-66!24;CL:0000236!4.29e-38!14;CL:0000542!5.57e-33!53;CL:0000051!5.57e-33!53;CL:0000838!1.66e-30!52;CL:0002087!9.07e-14!119;CL:0000738!5.53e-12!140;CL:0000037!2.31e-11!172;CL:0000566!2.31e-11!172;CL:0002032!4.06e-11!165;CL:0000837!4.06e-11!165;CL:0002031!1.46e-10!124;CL:0000988!2.29e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.50e-75;24!CL:0000236;2.94e-46;13!CL:0000542;8.93e-30;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.51e-75,24;CL:0000826,2.51e-75,24;CL:0000236,4.75e-43,14;CL:0000542,3.81e-38,53;CL:0000051,3.81e-38,53;CL:0000838,1.16e-33,52;CL:0002087,3.68e-16,115;CL:0000738,2.26e-15,136;CL:0002031,3.30e-13,120;CL:0002032,1.33e-12,161;CL:0000837,1.33e-12,161;CL:0000037,5.66e-12,168;CL:0000988,3.09e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000051;8.93e-30;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:12603;2.66e-11;1!DOID:0060058;5.17e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.53e-11,1;DOID:0060058,5.03e-09,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;9.96e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.10e-10,1 | |||
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| ||
|short_description=p9@IGHM | |short_description=p9@IGHM | ||
}} | }} |
Latest revision as of 20:33, 18 September 2015
Short description: | p9@IGHM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_IGHM_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -130bp_to_J00258_5end |
EntrezGene: | IGHM |
HGNC: | 5541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.51e-75 | 24 |
pro-B cell | 2.51e-75 | 24 |
B cell | 4.75e-43 | 14 |
lymphocyte | 3.81e-38 | 53 |
common lymphoid progenitor | 3.81e-38 | 53 |
lymphoid lineage restricted progenitor cell | 1.16e-33 | 52 |
nongranular leukocyte | 3.68e-16 | 115 |
leukocyte | 2.26e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 3.30e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.33e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.33e-12 | 161 |
hematopoietic stem cell | 5.66e-12 | 168 |
hematopoietic cell | 3.09e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.10e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.53e-11 | 1 |
lymphoma | 5.03e-09 | 10 |