FFCP PHASE1:Hg19::chr19:41770978..41771004,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11100 | |EntrezGene=11100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17011 | |HGNC=17011 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010eho.2_5end | |association_with_transcript=0bp_to_uc010eho.2_5end | ||
|cluster_id=chr19:41770978..41771004,+ | |||
|description=CAGE_peak_3_at_HNRNPUL1_5end | |description=CAGE_peak_3_at_HNRNPUL1_5end | ||
|id=chr19:41770978..41771004,+ | |id=chr19:41770978..41771004,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.92e-39!679;CL:0000004!1.92e-39!679;CL:0000255!1.92e-39!679;CL:0000012!4.01e-38!682;CL:0002321!1.11e-28!248;CL:0000220!1.13e-28!246;CL:0000144!1.15e-27!625;CL:0002371!1.74e-23!591;CL:0000003!4.18e-23!722;CL:0000066!4.18e-22!254;CL:0000055!6.79e-22!180;CL:0000222!1.31e-18!119;CL:0000063!1.49e-13!578;CL:0000183!9.96e-13!59;CL:0000680!8.75e-12!57;CL:0000056!8.75e-12!57;CL:0000355!8.75e-12!57;CL:0000187!2.22e-11!54;CL:0000192!2.80e-09!42;CL:0000514!2.80e-09!42;CL:0000393!6.52e-09!60;CL:0000211!6.52e-09!60;CL:0000057!6.61e-09!75;CL:0000359!7.28e-08!32;CL:0000076!6.09e-07!62 | |ontology_enrichment_celltype=CL:0000548!1.92e-39!679;CL:0000004!1.92e-39!679;CL:0000255!1.92e-39!679;CL:0000012!4.01e-38!682;CL:0002321!1.11e-28!248;CL:0000220!1.13e-28!246;CL:0000144!1.15e-27!625;CL:0002371!1.74e-23!591;CL:0000003!4.18e-23!722;CL:0000066!4.18e-22!254;CL:0000055!6.79e-22!180;CL:0000222!1.31e-18!119;CL:0000063!1.49e-13!578;CL:0000183!9.96e-13!59;CL:0000680!8.75e-12!57;CL:0000056!8.75e-12!57;CL:0000355!8.75e-12!57;CL:0000187!2.22e-11!54;CL:0000192!2.80e-09!42;CL:0000514!2.80e-09!42;CL:0000393!6.52e-09!60;CL:0000211!6.52e-09!60;CL:0000057!6.61e-09!75;CL:0000359!7.28e-08!32;CL:0000076!6.09e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.48e-07;32!CL:1000507;5.12e-07;10!CL:1000494;5.12e-07;10!CL:0000192;6.02e-07;43!CL:0000187;8.50e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.08e-29,250;CL:0000066,5.74e-22,253;CL:0000222,7.09e-19,121;CL:0000680,9.66e-12,58;CL:0000056,9.66e-12,58;CL:0000355,9.66e-12,58;CL:0000187,2.47e-11,55;CL:0000192,3.21e-09,43;CL:0000514,3.21e-09,43;CL:0000057,5.93e-09,76;CL:0000393,6.77e-09,61;CL:0000211,6.77e-09,61;CL:0000359,6.86e-08,32;CL:1000507,5.09e-07,10;CL:1000494,5.09e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000355;1.98e-07;58!CL:0000514;6.02e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!3.15e-15!138;UBERON:0003914!8.29e-15!118;UBERON:0005256!1.23e-14!143;UBERON:0003104!2.13e-13!238;UBERON:0009142!2.13e-13!238;UBERON:0000486!5.14e-13!82;UBERON:0002100!1.04e-12!216;UBERON:0000914!3.57e-10!83;UBERON:0002329!3.57e-10!83;UBERON:0003077!3.57e-10!83;UBERON:0003059!3.57e-10!83;UBERON:0007282!3.57e-10!83;UBERON:0009618!3.57e-10!83;UBERON:0007285!3.57e-10!83;UBERON:0004290!4.71e-10!70;UBERON:0001637!2.12e-09!42;UBERON:0003509!2.12e-09!42;UBERON:0004572!2.12e-09!42;UBERON:0001134!2.34e-09!61;UBERON:0002036!2.34e-09!61;UBERON:0003082!2.34e-09!61;UBERON:0002049!1.29e-08!79;UBERON:0007798!1.29e-08!79;UBERON:0004872!1.91e-08!84;UBERON:0002385!1.93e-08!63;UBERON:0001015!1.93e-08!63;UBERON:0000383!1.93e-08!63;UBERON:0001981!2.46e-08!60;UBERON:0007500!2.46e-08!60;UBERON:0004537!2.46e-08!60;UBERON:0006965!2.46e-08!60;UBERON:0000055!6.90e-08!69;UBERON:0001048!2.73e-07!168;UBERON:0004573!3.98e-07!33;UBERON:0004571!3.98e-07!33;UBERON:0000119!4.69e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.23e-07;74!UBERON:0001637;4.37e-07;42!UBERON:0003509;4.37e-07;42!UBERON:0004572;4.37e-07;42!UBERON:0004211;5.12e-07;10!UBERON:0009773;5.12e-07;10!UBERON:0001231;5.12e-07;10!UBERON:0004810;5.12e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,4.53e-16,148;UBERON:0003914,6.85e-15,117;UBERON:0002100,1.60e-13,199;UBERON:0000486,5.25e-13,83;UBERON:0003104,2.47e-12,160;UBERON:0009142,2.47e-12,160;UBERON:0005256,2.63e-11,122;UBERON:0007503,2.71e-11,78;UBERON:0002329,4.84e-10,71;UBERON:0003059,4.84e-10,71;UBERON:0007282,4.84e-10,71;UBERON:0004290,4.84e-10,71;UBERON:0009618,4.84e-10,71;UBERON:0003077,1.85e-09,72;UBERON:0007285,1.85e-09,72;UBERON:0001637,1.97e-09,42;UBERON:0003509,1.97e-09,42;UBERON:0004572,1.97e-09,42;UBERON:0001134,2.45e-09,62;UBERON:0002036,2.45e-09,62;UBERON:0003082,2.45e-09,62;UBERON:0007524,2.98e-09,73;UBERON:0002049,1.81e-08,78;UBERON:0007798,1.81e-08,78;UBERON:0002385,2.24e-08,64;UBERON:0001015,2.24e-08,64;UBERON:0000383,2.24e-08,64;UBERON:0004872,2.66e-08,83;UBERON:0007500,3.50e-08,59;UBERON:0001981,3.50e-08,59;UBERON:0004537,3.50e-08,59;UBERON:0006965,3.50e-08,59;UBERON:0000055,9.71e-08,68;UBERON:0000119,3.67e-07,309;UBERON:0004573,3.78e-07,33;UBERON:0004571,3.78e-07,33;UBERON:0004810,5.09e-07,10 | |||
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| ||
|short_description=p3@HNRNPUL1 | |short_description=p3@HNRNPUL1 | ||
}} | }} |
Latest revision as of 04:22, 18 September 2015
Short description: | p3@HNRNPUL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HNRNPUL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010eho.2_5end |
EntrezGene: | HNRNPUL1 |
HGNC: | 17011 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.08e-29 | 250 |
epithelial cell | 5.74e-22 | 253 |
mesodermal cell | 7.09e-19 | 121 |
muscle precursor cell | 9.66e-12 | 58 |
myoblast | 9.66e-12 | 58 |
multi-potent skeletal muscle stem cell | 9.66e-12 | 58 |
muscle cell | 2.47e-11 | 55 |
smooth muscle cell | 3.21e-09 | 43 |
smooth muscle myoblast | 3.21e-09 | 43 |
fibroblast | 5.93e-09 | 76 |
electrically responsive cell | 6.77e-09 | 61 |
electrically active cell | 6.77e-09 | 61 |
vascular associated smooth muscle cell | 6.86e-08 | 32 |
kidney tubule cell | 5.09e-07 | 10 |
nephron tubule epithelial cell | 5.09e-07 | 10 |