FFCP PHASE1:Hg19::chr19:41257160..41257167,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6626 | |EntrezGene=6626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11151 | |HGNC=11151 | ||
|TSSclassifier=strong | |||
|UniProt=B4DDC7 | |UniProt=B4DDC7 | ||
|association_with_transcript=34bp_to_ENST00000545469_5end | |association_with_transcript=34bp_to_ENST00000545469_5end | ||
|cluster_id=chr19:41257160..41257167,+ | |||
|coexpression_cluster_id=C3793 | |||
|description=CAGE_peak_6_at_SNRPA_5end | |description=CAGE_peak_6_at_SNRPA_5end | ||
|id=chr19:41257160..41257167,+ | |id=chr19:41257160..41257167,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.65e-14!254;CL:0000548!2.59e-12!679;CL:0000004!2.59e-12!679;CL:0000255!2.59e-12!679;CL:0000012!9.49e-12!682;CL:0002321!5.67e-09!248;CL:0000220!1.19e-08!246;CL:0000003!3.03e-07!722 | |ontology_enrichment_celltype=CL:0000066!4.65e-14!254;CL:0000548!2.59e-12!679;CL:0000004!2.59e-12!679;CL:0000255!2.59e-12!679;CL:0000012!9.49e-12!682;CL:0002321!5.67e-09!248;CL:0000220!1.19e-08!246;CL:0000003!3.03e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002319;5.20e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.65e-12,253;CL:0002321,1.55e-07,250;CL:0002319,4.95e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.45e-37!235;DOID:14566!2.15e-36!239;DOID:0050686!4.63e-19!137;DOID:0050687!8.97e-19!143;DOID:2531!1.29e-14!51;DOID:0060083!1.29e-14!51;DOID:305!5.75e-14!106;DOID:1240!5.84e-11!39;DOID:8692!5.03e-08!31;DOID:3095!6.85e-07!22;DOID:2994!6.85e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:2531;6.73e-10;51!DOID:0060083;6.73e-10;51!DOID:1240;7.71e-10;39!DOID:8692;4.13e-08;31!DOID:3095;6.10e-08;22!DOID:2994;6.10e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.76e-36,235;DOID:14566,1.67e-34,239;DOID:0050687,3.64e-17,143;DOID:0050686,6.12e-17,137;DOID:2531,7.29e-16,51;DOID:0060083,7.29e-16,51;DOID:1240,2.33e-12,39;DOID:305,2.54e-12,106;DOID:8692,5.60e-09,31;DOID:3095,4.70e-08,22;DOID:2994,4.70e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@SNRPA | |short_description=p6@SNRPA | ||
}} | }} |
Latest revision as of 02:56, 18 September 2015
Short description: | p6@SNRPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SNRPA_5end |
Coexpression cluster: | C3793_iPS_testicular_Alveolar_Burkitt_transitionalcell_neuroblastoma_small |
Association with transcript: | 34bp_to_ENST00000545469_5end |
EntrezGene: | SNRPA |
HGNC: | 11151 |
UniProt: | B4DDC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.65e-12 | 253 |
embryonic cell | 1.55e-07 | 250 |
neural cell | 4.95e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.76e-36 | 235 |
disease of cellular proliferation | 1.67e-34 | 239 |
cell type cancer | 3.64e-17 | 143 |
organ system cancer | 6.12e-17 | 137 |
hematologic cancer | 7.29e-16 | 51 |
immune system cancer | 7.29e-16 | 51 |
leukemia | 2.33e-12 | 39 |
carcinoma | 2.54e-12 | 106 |
myeloid leukemia | 5.60e-09 | 31 |
germ cell and embryonal cancer | 4.70e-08 | 22 |
germ cell cancer | 4.70e-08 | 22 |