FFCP PHASE1:Hg19::chr14:102196739..102196744,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=145200 | |EntrezGene=145200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20119 | |HGNC=20119 | ||
|TSSclassifier=strong | |||
|UniProt=G3V466 | |UniProt=G3V466 | ||
|association_with_transcript=-29bp_to_ENST00000556973,NR_026774,uc010awj.2_5end | |association_with_transcript=-29bp_to_ENST00000556973,NR_026774,uc010awj.2_5end | ||
|cluster_id=chr14:102196739..102196744,+ | |||
|coexpression_cluster_id=C617 | |||
|description=CAGE_peak_1_at_LINC00239_5end | |description=CAGE_peak_1_at_LINC00239_5end | ||
|id=chr14:102196739..102196744,+ | |id=chr14:102196739..102196744,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.04e-26!140;CL:0002087!3.29e-23!119;CL:0000037!1.64e-20!172;CL:0000566!1.64e-20!172;CL:0002032!2.79e-19!165;CL:0000837!2.79e-19!165;CL:0002031!4.44e-19!124;CL:0000988!7.97e-19!182;CL:0002057!1.32e-13!42;CL:0000838!2.81e-13!52;CL:0000766!4.67e-13!76;CL:0000542!6.00e-13!53;CL:0000051!6.00e-13!53;CL:0000860!1.87e-12!45;CL:0000623!7.07e-11!3;CL:0000825!7.07e-11!3;CL:0000094!2.66e-10!8;CL:0002194!6.58e-09!63;CL:0000576!6.58e-09!63;CL:0000040!6.58e-09!63;CL:0000559!6.58e-09!63;CL:0000084!1.01e-08!25;CL:0000827!1.01e-08!25;CL:0002009!1.59e-08!65;CL:0000763!4.13e-08!112;CL:0000049!4.13e-08!112;CL:0000771!5.66e-08!2;CL:0000839!1.14e-07!70;CL:0000557!1.64e-07!71;CL:0000081!2.24e-07!11;CL:0000134!6.56e-07!358 | |ontology_enrichment_celltype=CL:0000738!5.04e-26!140;CL:0002087!3.29e-23!119;CL:0000037!1.64e-20!172;CL:0000566!1.64e-20!172;CL:0002032!2.79e-19!165;CL:0000837!2.79e-19!165;CL:0002031!4.44e-19!124;CL:0000988!7.97e-19!182;CL:0002057!1.32e-13!42;CL:0000838!2.81e-13!52;CL:0000766!4.67e-13!76;CL:0000542!6.00e-13!53;CL:0000051!6.00e-13!53;CL:0000860!1.87e-12!45;CL:0000623!7.07e-11!3;CL:0000825!7.07e-11!3;CL:0000094!2.66e-10!8;CL:0002194!6.58e-09!63;CL:0000576!6.58e-09!63;CL:0000040!6.58e-09!63;CL:0000559!6.58e-09!63;CL:0000084!1.01e-08!25;CL:0000827!1.01e-08!25;CL:0002009!1.59e-08!65;CL:0000763!4.13e-08!112;CL:0000049!4.13e-08!112;CL:0000771!5.66e-08!2;CL:0000839!1.14e-07!70;CL:0000557!1.64e-07!71;CL:0000081!2.24e-07!11;CL:0000134!6.56e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000771;7.72e-34;2!CL:0000623;1.25e-22;3!CL:0000094;3.20e-09;8!CL:0000860;1.04e-07;33!CL:0002057;1.04e-07;33!CL:0000473;1.05e-07;39!CL:0000234;1.05e-07;39!CL:0000081;6.07e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,8.39e-34,2;CL:0000623,1.40e-22,3;CL:0000825,1.40e-22,3;CL:0000094,3.27e-09,8;CL:0000738,4.93e-09,136;CL:0000766,5.73e-08,72;CL:0002032,1.63e-07,161;CL:0000837,1.63e-07,161;CL:0000037,3.61e-07,168;CL:0000081,6.16e-07,11;CL:0000988,9.17e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3111;2.66e-18;1!DOID:3603;2.66e-18;1!DOID:4556;6.14e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,2.66e-18,1;DOID:3603,2.66e-18,1;DOID:4556,6.14e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001474!2.66e-07!86 | |ontology_enrichment_uberon=UBERON:0001474!2.66e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@LINC00239 | |short_description=p1@LINC00239 | ||
}} | }} |
Latest revision as of 12:19, 18 September 2015
Short description: | p1@LINC00239 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00239_5end |
Coexpression cluster: | C617_mucinous_gall_signet_bile_maxillary_keratoacanthoma_Alveolar |
Association with transcript: | -29bp_to_ENST00000556973, NR_026774, uc010awj.2_5end |
EntrezGene: | LINC00239 |
HGNC: | 20119 |
UniProt: | G3V466 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 8.39e-34 | 2 |
natural killer cell | 1.40e-22 | 3 |
pro-NK cell | 1.40e-22 | 3 |
granulocyte | 3.27e-09 | 8 |
leukocyte | 4.93e-09 | 136 |
myeloid leukocyte | 5.73e-08 | 72 |
hematopoietic oligopotent progenitor cell | 1.63e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.63e-07 | 161 |
hematopoietic stem cell | 3.61e-07 | 168 |
blood cell | 6.16e-07 | 11 |
hematopoietic cell | 9.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 2.66e-18 | 1 |
mucinous cystadenocarcinoma | 2.66e-18 | 1 |
lung large cell carcinoma | 6.14e-07 | 3 |