FFCP PHASE1:Hg19::chr11:124543604..124543654,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:124543604..124543654,-
|short_description=p1@SIAE
|description=CAGE_peak_1_at_SIAE_5end
|association_with_transcript=62bp_to_ENST00000436137,uc001qan.2,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54414 | |EntrezGene=54414 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18187 | |HGNC=18187 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HAT2 | |UniProt=Q9HAT2 | ||
|association_with_transcript=62bp_to_ENST00000436137,uc001qan.2,uc001qao.1_5end | |||
|cluster_id=chr11:124543604..124543654,- | |||
|description=CAGE_peak_1_at_SIAE_5end | |||
|id=chr11:124543604..124543654,- | |||
|ontology_enrichment_celltype=CL:0000057!3.04e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.65e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.42e-15!659;UBERON:0000480!4.30e-15!626;UBERON:0000467!8.05e-15!625;UBERON:0000481!2.01e-14!347;UBERON:0000475!3.06e-13!365;UBERON:0000477!3.19e-13!286;UBERON:0004111!5.56e-12!241;UBERON:0000483!1.97e-10!309;UBERON:0000119!2.56e-10!312;UBERON:0000062!1.58e-09!511;UBERON:0000923!3.83e-09!604;UBERON:0005291!3.83e-09!604;UBERON:0006598!3.83e-09!604;UBERON:0002532!3.83e-09!604;UBERON:0002050!5.42e-09!605;UBERON:0005423!5.42e-09!605;UBERON:0007023!7.27e-09!115;UBERON:0000922!7.59e-08!612;UBERON:0000025!4.29e-07!194;UBERON:0004119!6.49e-07!169;UBERON:0000925!6.49e-07!169;UBERON:0006595!6.49e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,8.00e-12,240;UBERON:0000483,4.09e-11,306;UBERON:0000119,5.40e-11,309;UBERON:0007023,6.88e-09,114;UBERON:0005423,9.15e-09,581;UBERON:0002050,4.57e-08,564;UBERON:0000923,5.40e-08,560;UBERON:0010316,5.40e-08,560;UBERON:0005291,5.40e-08,560;UBERON:0006598,5.40e-08,560;UBERON:0010317,5.40e-08,560;UBERON:0002532,5.40e-08,560;UBERON:0004119,1.81e-07,160;UBERON:0000925,1.81e-07,160;UBERON:0006595,1.81e-07,160;UBERON:0003102,4.30e-07,99;UBERON:0000025,5.54e-07,192;UBERON:0001007,6.86e-07,145;UBERON:0001555,6.86e-07,145;UBERON:0007026,6.86e-07,145;UBERON:0011216,8.41e-07,223;UBERON:0000922,8.65e-07,592 | |||
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| ||
|short_description=p1@SIAE | |||
}} | }} |
Latest revision as of 11:25, 16 September 2015
Short description: | p1@SIAE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIAE_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000436137, uc001qan.2, uc001qao.1_5end |
EntrezGene: | SIAE |
HGNC: | 18187 |
UniProt: | Q9HAT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.65e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 8.00e-12 | 240 |
epithelium | 4.09e-11 | 306 |
cell layer | 5.40e-11 | 309 |
adult organism | 6.88e-09 | 114 |
developing anatomical structure | 9.15e-09 | 581 |
embryonic structure | 4.57e-08 | 564 |
germ layer | 5.40e-08 | 560 |
germ layer / neural crest | 5.40e-08 | 560 |
embryonic tissue | 5.40e-08 | 560 |
presumptive structure | 5.40e-08 | 560 |
germ layer / neural crest derived structure | 5.40e-08 | 560 |
epiblast (generic) | 5.40e-08 | 560 |
endoderm-derived structure | 1.81e-07 | 160 |
endoderm | 1.81e-07 | 160 |
presumptive endoderm | 1.81e-07 | 160 |
surface structure | 4.30e-07 | 99 |
tube | 5.54e-07 | 192 |
digestive system | 6.86e-07 | 145 |
digestive tract | 6.86e-07 | 145 |
primitive gut | 6.86e-07 | 145 |
organ system subdivision | 8.41e-07 | 223 |
embryo | 8.65e-07 | 592 |