FFCP PHASE1:Hg19::chr19:36119912..36119923,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79171 | |EntrezGene=79171 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28117 | |HGNC=28117 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BTD8 | |UniProt=Q9BTD8 | ||
|association_with_transcript=-56bp_to_ENST00000262633,ENST00000360475,NM_024321,uc002oan.2,uc002oao.2,uc002oap.2,uc002oaq.2,uc010eef.2,uc010eeg.2,uc010xsx.1_5end | |association_with_transcript=-56bp_to_ENST00000262633,ENST00000360475,NM_024321,uc002oan.2,uc002oao.2,uc002oap.2,uc002oaq.2,uc010eef.2,uc010eeg.2,uc010xsx.1_5end | ||
|cluster_id=chr19:36119912..36119923,+ | |||
|description=CAGE_peak_3_at_RBM42_5end | |description=CAGE_peak_3_at_RBM42_5end | ||
|id=chr19:36119912..36119923,+ | |id=chr19:36119912..36119923,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.17e-08;9!UBERON:0001557;7.17e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.29e-09,9;UBERON:0008947,3.63e-07,38;UBERON:0003258,3.63e-07,38;UBERON:0005631,6.01e-07,14;UBERON:0000158,6.01e-07,14 | |||
|phase1_expression=0.363356758541113,1.92690471501885,0.986680828671798,0,0.893922188854576,0,0,1.26343974685366,0.261185628199839,1.72013755551056,3.48900583986214,0.873765488520689,1.31883489114227,0.495065411840187,0.331397375727916,1.34465029290355,0.602694528023977,0.730310090387373,0,0.369363174230364,0.612002073732759,1.56727360739044,0,0.547497700291537,0.502170558379211,0.534893840235659,0.656804715599566,0.472264687882075,0.786728553697808,0.383829398097213,0.309632246632152,0,1.50602959389125,0.739508020333575,0.154934401160603,0,0,0.553995408531877,0.401088894940283,0.217010870715852,1.34349284543955,0,0.515151135268373,1.01778767145695,1.88937971844405,1.4555043671269,2.32429036905685,1.6446715520873,0.619412741790207,1.43846196161075,0.256160706529101,0.945928919554341,0,1.93645405075148,0,0.752969358170419,0.272906150057846,1.34834090667051,1.53041946185451,0.320929027076094,1.27867425159808,0,0.199463657621632,0.852449501065388,0.870627715885752,0,1.24564449799115,0.75374599577023,0,0.868755378820466,0.605399502633369,1.47311054395026,0.316462387440884,0.845021145247767,0.637812899895131,0.628975936525128,1.01095768031846,0.750884464207532,1.12507910687956,0.570025487482497,1.59133341759272,2.37463399894024,1.75996244461323,0,0,0,0.800791974072025,0,0.661044872784862,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0.668745981562712,0.32592226663359,0.473447805734733,0,1.44833593950726,0.589211814949674,0.443067789167242,0.812411591295047,1.5370958367081,1.04047478047903,1.31550323682941,1.38175008892924,0.289803085735052,0.296573126324121,0.535081656179426,1.04535523804977,1.0197840842781,0.383220493601921,0.68725489096526,0.506039384039006,0.318565414324097,1.30216690771284,0,0.752875595388864,0.511946444617674,0,0.473554504088034,0.821127996921047,0,0,0.144824403882799,4.87613732627923,0.670700859703636,0.383587685530591,0,1.50401373190767,1.15877215168659,0,0.973269740605272,0.189069634328136,0.443458794925128,0.43917392846563,0.916853528483988,2.91436230634034,1.11235332835329,2.27183175558278,1.91542711029194,1.06366368415092,0,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,1.6507082516404,0.835979866147242,0.516833518338658,0,0,0.402829317109147,1.52054421143703,0.488124115096339,0.367663080345869,0,0.267899184852239,0.22452937262617,0.563057402416611,0,0,0.183201743930407,3.9534125230819,0,2.18047026071267,0,0.633152558322899,1.19168262731897,0.573673241497627,0.354668382198357,0,0,0.49333509683432,0,0.404132016209064,0.653847612453835,0.151357427644931,1.15235184896,0.234321431833797,0.624320153660641,1.71141546463335,0.597794722207204,0.587172493218824,0.485618833104395,0.140450806702248,0.204154171254893,0.982674538494144,0.826606249406124,1.18800285728205,0.989067717114227,0.910161361938026,2.87447256726495,0.168336113954066,0.375355559615893,0.277064115484183,0,0.612975591598039,0.751190294532984,0.794025282120147,1.25572744982203,0.85422955527427,0.423863802319124,1.50045548042201,0.412210116953756,0,1.48893485065272,1.18143432568886,0.779496041289589,1.7670364197088,0.368199594569197,0.323292113637624,1.06502877754984,0.906768884048762,0.67824236924195,2.12586938479627,1.36373060295417,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0.756962552626885,1.45990943630332,0,0.643240938192885,0,0.464367928031979,0,1.8929088006375,3.37169380156203,1.92808823906786,3.08823123650703,2.17879444092406,2.84724742933316,1.75280700608214,2.94332197688019,3.46272441251751,0,0,1.6462960453256,1.47008711385542,0,0.982827216677626,1.77236972004421,2.6487785964879,0.245976877086227,0.343135620597051,1.09750285408626,3.37205259772859,1.20634766893957,0.555530670951178,0.325808305310325,2.07986957055916,1.44331342025273,0,0.117408694235822,0.288732895522148,2.31492756288305,0.190254152234598,1.58040879591855,1.71697232418975,1.72351904261178,2.57404691653161,2.37809859661965,3.74935335947108,1.00789276919316,0.283550194484773,1.43293636324557,1.16253575405585,2.68367875415648,0,0.528290604079356,1.03664057770386,0.864719720501769,0.88369703398466,0.253991577168676,1.14596527667483,0,3.4214489204541,0.308482478109971,1.50171528921959,0.285826432630578,0.448524337381443,0.43596006883328,0.36669142910475,0.258543431515556,3.57656445851882,1.690605505112,1.06375246633948,3.12022310734098,1.54324424557285,5.67396528093113,3.99633268524149,0.285955987316295,0,0,0.325736184293735,0,0.791951872933429,1.20575750823834,1.74306691720059,1.3996218765488,1.2162378064119,0,2.10833939483032,0.239624855491583,0,0,1.59259437334337,2.26023954805422,0.716243852959582,0.336255431980582,0.394061520403854,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,0,0.749007023947182,2.99161459204025,1.24324654030811,0,1.00034104211935,0,0.415941723061614,0.892144943985809,0.946214490203608,0.35142424497814,0.601892199455438,4.5481500811197,1.03473071292505,1.32845119707087,0.737476674166813,0.781952530212746,0.195801157462741,0.686286847621712,0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| ||
|short_description=p3@RBM42 | |short_description=p3@RBM42 | ||
}} | }} |
Latest revision as of 12:43, 17 September 2015
Short description: | p3@RBM42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RBM42_5end |
Coexpression cluster: | NA |
Association with transcript: | -56bp_to_ENST00000262633, ENST00000360475, NM_024321, uc002oan.2, uc002oao.2, uc002oap.2, uc002oaq.2, uc010eef.2, uc010eeg.2, uc010xsx.1_5end |
EntrezGene: | RBM42 |
HGNC: | 28117 |
UniProt: | Q9BTD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 6.29e-09 | 9 |
respiratory primordium | 3.63e-07 | 38 |
endoderm of foregut | 3.63e-07 | 38 |
extraembryonic membrane | 6.01e-07 | 14 |
membranous layer | 6.01e-07 | 14 |