FFCP PHASE1:Hg19::chr13:99405077..99405084,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6564 | |EntrezGene=6564 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10920 | |HGNC=10920 | ||
|TSSclassifier=strong | |||
|UniProt=B2CQT6,P46059 | |UniProt=B2CQT6,P46059 | ||
|association_with_transcript=-148bp_to_NM_005073,uc001vno.2_5end | |association_with_transcript=-148bp_to_NM_005073,uc001vno.2_5end | ||
|cluster_id=chr13:99405077..99405084,- | |||
|description=CAGE_peak_5_at_SLC15A1_5end | |description=CAGE_peak_5_at_SLC15A1_5end | ||
|id=chr13:99405077..99405084,- | |id=chr13:99405077..99405084,- | ||
|ontology_enrichment_celltype=CL:0000313!3.25e-09!1 | |ontology_enrichment_celltype=CL:0000313!3.25e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002178;5.04e-34;3!CL:0000083;6.30e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,5.96e-34,3;CL:0000083,5.56e-26,4;CL:0000223,4.33e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!7.68e-18!2;DOID:299!2.53e-15!25;DOID:2152!3.25e-09!1;DOID:305!2.18e-07!106 | |ontology_enrichment_disease=DOID:4929!7.68e-18!2;DOID:299!2.53e-15!25;DOID:2152!3.25e-09!1;DOID:305!2.18e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:4929;3.52e-50;2!DOID:1793;6.30e-26;4!DOID:170;8.34e-18;6!DOID:299;4.64e-17;25!DOID:3119;1.93e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.74e-50,2;DOID:1793,5.56e-26,4;DOID:170,7.67e-18,6;DOID:299,4.64e-17,25;DOID:3119,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000160!1.25e-17!27;UBERON:0005409!4.22e-17!35;UBERON:0001155!8.75e-15!9;UBERON:0000059!3.94e-12!11;UBERON:0004913!9.44e-10!1;UBERON:0003703!9.44e-10!1;UBERON:0001174!9.44e-10!1;UBERON:0004914!9.44e-10!1;UBERON:0001154!1.43e-09!1;UBERON:0001153!1.43e-09!1;UBERON:0004911!3.25e-09!1;UBERON:0002394!5.51e-09!4;UBERON:0003928!5.51e-09!4;UBERON:0002363!5.72e-09!1;UBERON:0007647!5.72e-09!1;UBERON:0010115!5.72e-09!1;UBERON:0002108!6.07e-09!14;UBERON:0004907!1.66e-07!5 | |ontology_enrichment_uberon=UBERON:0000160!1.25e-17!27;UBERON:0005409!4.22e-17!35;UBERON:0001155!8.75e-15!9;UBERON:0000059!3.94e-12!11;UBERON:0004913!9.44e-10!1;UBERON:0003703!9.44e-10!1;UBERON:0001174!9.44e-10!1;UBERON:0004914!9.44e-10!1;UBERON:0001154!1.43e-09!1;UBERON:0001153!1.43e-09!1;UBERON:0004911!3.25e-09!1;UBERON:0002394!5.51e-09!4;UBERON:0003928!5.51e-09!4;UBERON:0002363!5.72e-09!1;UBERON:0007647!5.72e-09!1;UBERON:0010115!5.72e-09!1;UBERON:0002108!6.07e-09!14;UBERON:0004907!1.66e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;4.66e-21;5!UBERON:0010039;4.66e-21;5!UBERON:0001264;2.87e-11;10!UBERON:0001041;1.93e-08;14!UBERON:0002075;7.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.07e-13,8;UBERON:0010039,1.07e-13,8;UBERON:0001264,2.73e-11,10;UBERON:0002075,7.18e-07,18 | |||
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|short_description=p5@SLC15A1 | |short_description=p5@SLC15A1 | ||
}} | }} |
Latest revision as of 07:53, 18 September 2015
Short description: | p5@SLC15A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC15A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -148bp_to_NM_005073, uc001vno.2_5end |
EntrezGene: | SLC15A1 |
HGNC: | 10920 |
UniProt: | B2CQT6P46059 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 5.96e-34 | 3 |
epithelial cell of pancreas | 5.56e-26 | 4 |
endodermal cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
stomach | 1.07e-13 | 8 |
food storage organ | 1.07e-13 | 8 |
pancreas | 2.73e-11 | 10 |
viscus | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.74e-50 | 2 |
pancreatic cancer | 5.56e-26 | 4 |
endocrine gland cancer | 7.67e-18 | 6 |
adenocarcinoma | 4.64e-17 | 25 |
gastrointestinal system cancer | 2.00e-08 | 14 |