FFCP PHASE1:Hg19::chr13:98670838..98670857,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3843 | |EntrezGene=3843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6402 | |HGNC=6402 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468620_5end | |association_with_transcript=0bp_to_ENST00000468620_5end | ||
|cluster_id=chr13:98670838..98670857,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_7_at_IPO5_5end | |description=CAGE_peak_7_at_IPO5_5end | ||
|id=chr13:98670838..98670857,+ | |id=chr13:98670838..98670857,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;7.01e-08;5!CL:0000540;8.97e-07;6!CL:0000404;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.48e-07,6;CL:0000031,8.48e-07,6;CL:0000404,8.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!CL:0000031;8.97e-07;6 | |||
|ontology_enrichment_disease=DOID:162!3.88e-07!235;DOID:14566!4.46e-07!239 | |ontology_enrichment_disease=DOID:162!3.88e-07!235;DOID:14566!4.46e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3193;1.07e-17;2!DOID:962;1.07e-17;2!DOID:1192;2.89e-12;3!DOID:169;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,1.07e-17,2;DOID:962,1.07e-17,2;DOID:1192,2.89e-12,3;DOID:169,8.97e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;1.07e-17;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000013;7.01e-08;5!UBERON:0002410;7.01e-08;5!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,1.07e-17,2;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0000013,7.01e-08,5;UBERON:0002410,7.01e-08,5;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.152826811495903,0,0,0,0,0,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,7.85874452986276,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0.494533858557114,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,1.91381625495949,0,0,0,0,0.500170521059677,0,0.207970861530807,0.356857977594324,0.315404830067869,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0.165018999841176,0,0,0,0,0,0,0.275673144969061,0.214840489736547,0,0.0852266274161009,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0.163232808159148,0.282706142867882,0,0,0,0,0,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0,0.150323419414493,0.103688191397247,0.664653872707185,0,0,0,0,0.138674673013139,0,0,0.174118413160805,0,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0,0,0.19871461170299,0.0633107959558787,0,0.160317640503067,0,0,0,0.229073192331831,0,0.14405479798815,0,0.942776138467182,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0.83088067605837,0,0,0.0607495566580247,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0.279759015438889,0,0,0.107824811396682,0.314531883711793,0.109209638192014,0.33946505990805,0.212574920101683,0.371807292777007,1.11728983594649,0.954013051960256,0,0.80057074828547,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0.0981477185010256,0.11796972334774,0,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0,0.158013611732727,0.116241425368125,0.347716544605159,0,0,0,0.691259661814092,0,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0.509781344063451,0.0939839179798536,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0.432626562123789,0.252332849670158,0,0,0,0,0.0918948995348449,0.50141507858475,21.2938141993253,25.456592364837,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.152826811495903,0,0,0,0,0,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,7.85874452986276,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0.494533858557114,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,1.91381625495949,0,0,0,0,0.500170521059677,0,0.207970861530807,0.356857977594324,0.315404830067869,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0.165018999841176,0,0,0,0,0,0,0.275673144969061,0.214840489736547,0,0.0852266274161009,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0.163232808159148,0.282706142867882,0,0,0,0,0,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0,0.150323419414493,0.103688191397247,0.664653872707185,0,0,0,0,0.138674673013139,0,0,0.174118413160805,0,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0,0,0.19871461170299,0.0633107959558787,0,0.160317640503067,0,0,0,0.229073192331831,0,0.14405479798815,0,0.942776138467182,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0.83088067605837,0,0,0.0607495566580247,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0.279759015438889,0,0,0.107824811396682,0.314531883711793,0.109209638192014,0.33946505990805,0.212574920101683,0.371807292777007,1.11728983594649,0.954013051960256,0,0.80057074828547,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0.0981477185010256,0.11796972334774,0,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0,0.158013611732727,0.116241425368125,0.347716544605159,0,0,0,0.691259661814092,0,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0.509781344063451,0.0939839179798536,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0.432626562123789,0.252332849670158,0,0,0,0,0.0918948995348449,0.50141507858475,21.2938141993253,25.456592364837,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p7@IPO5 | |short_description=p7@IPO5 | ||
}} | }} |
Latest revision as of 07:06, 18 September 2015
Short description: | p7@IPO5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IPO5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000468620_5end |
EntrezGene: | IPO5 |
HGNC: | 6402 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.48e-07 | 6 |
neuroblast | 8.48e-07 | 6 |
electrically signaling cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 1.07e-17 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
sympathetic nervous system | 7.01e-08 | 5 |
autonomic nervous system | 7.01e-08 | 5 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 1.07e-17 | 2 |
neurofibroma | 1.07e-17 | 2 |
peripheral nervous system neoplasm | 2.89e-12 | 3 |
neuroendocrine tumor | 8.97e-07 | 6 |