FFCP PHASE1:Hg19::chr19:3557974..3557985,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126321 | |EntrezGene=126321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28299 | |HGNC=28299 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NUT3,E9PAJ8,A8MXP7 | |UniProt=Q6NUT3,E9PAJ8,A8MXP7 | ||
|association_with_transcript=-403bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | |association_with_transcript=-403bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | ||
|cluster_id=chr19:3557974..3557985,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_11_at_MFSD12_5end | |description=CAGE_peak_11_at_MFSD12_5end | ||
|id=chr19:3557974..3557985,- | |id=chr19:3557974..3557985,- | ||
|ontology_enrichment_celltype=CL:0000148!6.64e-40!10;CL:0000541!6.64e-40!10;CL:0000147!2.61e-28!14;CL:0002567!7.48e-26!3;CL:0002150!3.57e-25!3;CL:0000861!3.57e-25!3;CL:0000710!1.35e-19!20;CL:0002077!1.10e-18!33;CL:0000325!1.32e-15!39;CL:0000075!2.57e-14!27;CL:0000333!3.52e-11!41;CL:0002566!1.12e-09!1;CL:0000066!3.55e-09!254;CL:0000235!6.29e-08!10;CL:0000221!1.04e-07!71;CL:0000133!1.47e-07!59;CL:0000312!4.57e-07!5 | |ontology_enrichment_celltype=CL:0000148!6.64e-40!10;CL:0000541!6.64e-40!10;CL:0000147!2.61e-28!14;CL:0002567!7.48e-26!3;CL:0002150!3.57e-25!3;CL:0000861!3.57e-25!3;CL:0000710!1.35e-19!20;CL:0002077!1.10e-18!33;CL:0000325!1.32e-15!39;CL:0000075!2.57e-14!27;CL:0000333!3.52e-11!41;CL:0002566!1.12e-09!1;CL:0000066!3.55e-09!254;CL:0000235!6.29e-08!10;CL:0000221!1.04e-07!71;CL:0000133!1.47e-07!59;CL:0000312!4.57e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.62e-79;10!CL:0002567;5.01e-67;3!CL:0000147;1.39e-56;14!CL:0000710;1.06e-39;20!CL:0000075;1.80e-29;27!CL:0002566;2.62e-23;1!CL:0002077;2.24e-20;34!CL:0000149;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.62e-79,10;CL:0000541,4.62e-79,10;CL:0002567,5.01e-67,3;CL:0000147,1.39e-56,14;CL:0000710,1.06e-39,20;CL:0000075,1.80e-29,27;CL:0002077,1.93e-23,34;CL:0002566,2.62e-23,1;CL:0000333,1.46e-18,41;CL:0000133,4.20e-13,59;CL:0000221,8.41e-11,72;CL:0000149,8.61e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;1.26e-07;59 | |||
|ontology_enrichment_disease=DOID:305!1.07e-08!106;DOID:0050687!4.27e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.24e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.62e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.88e-55!9;UBERON:0001557!1.89e-25!19;UBERON:0008947!3.18e-12!38;UBERON:0003258!3.18e-12!38;UBERON:0000072!6.44e-10!46;UBERON:0000065!1.80e-08!53 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p11@MFSD12 | |short_description=p11@MFSD12 | ||
}} | }} |
Latest revision as of 09:45, 17 September 2015
Short description: | p11@MFSD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MFSD12_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -403bp_to_ENST00000355415, ENST00000389395, ENST00000398558, NM_001042680, NM_021731, NM_174983, uc002lxw.2, uc002lxx.2, uc002lxz.2_5end |
EntrezGene: | MFSD12 |
HGNC: | 28299 |
UniProt: | Q6NUT3E9PAJ8A8MXP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.62e-79 | 10 |
melanoblast | 4.62e-79 | 10 |
light melanocyte | 5.01e-67 | 3 |
pigment cell | 1.39e-56 | 14 |
neurecto-epithelial cell | 1.06e-39 | 20 |
columnar/cuboidal epithelial cell | 1.80e-29 | 27 |
ecto-epithelial cell | 1.93e-23 | 34 |
dark melanocyte | 2.62e-23 | 1 |
migratory neural crest cell | 1.46e-18 | 41 |
neurectodermal cell | 4.20e-13 | 59 |
ectodermal cell | 8.41e-11 | 72 |
visual pigment cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.62e-12 | 2 |