FFCP PHASE1:Hg19::chr13:93879137..93879148,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10082 | |EntrezGene=10082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4454 | |HGNC=4454 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y625 | |UniProt=Q9Y625 | ||
|association_with_transcript=42bp_to_ENST00000377047_5end | |association_with_transcript=42bp_to_ENST00000377047_5end | ||
|cluster_id=chr13:93879137..93879148,+ | |||
|coexpression_cluster_id=C1192 | |||
|description=CAGE_peak_10_at_GPC6_5end | |description=CAGE_peak_10_at_GPC6_5end | ||
|id=chr13:93879137..93879148,+ | |id=chr13:93879137..93879148,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.15e-14!180;CL:0000057!3.24e-07!75;CL:0002319!4.53e-07!25 | |ontology_enrichment_celltype=CL:0000055!2.15e-14!180;CL:0000057!3.24e-07!75;CL:0002319!4.53e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000327;3.48e-10;15!CL:0000499;2.05e-08;28!CL:0000153;8.43e-08;9!CL:0000447;8.43e-08;9!CL:0000138;4.41e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000327,1.91e-10,15;CL:0000499,1.50e-08,28;CL:0000153,6.72e-08,9;CL:0000447,6.72e-08,9;CL:0000058,4.40e-07,6;CL:0000138,4.40e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.05e-15!365;UBERON:0000481!8.39e-13!347;UBERON:0000119!1.32e-10!312;UBERON:0000483!1.34e-10!309;UBERON:0000073!1.25e-08!94;UBERON:0001016!1.25e-08!94;UBERON:0005743!1.29e-08!86;UBERON:0000468!1.50e-08!659;UBERON:0001017!3.76e-08!82;UBERON:0000477!9.41e-08!286;UBERON:0000025!1.32e-07!194;UBERON:0002346!1.67e-07!90;UBERON:0002100!9.70e-07!216 | |ontology_enrichment_uberon=UBERON:0000475!2.05e-15!365;UBERON:0000481!8.39e-13!347;UBERON:0000119!1.32e-10!312;UBERON:0000483!1.34e-10!309;UBERON:0000073!1.25e-08!94;UBERON:0001016!1.25e-08!94;UBERON:0005743!1.29e-08!86;UBERON:0000468!1.50e-08!659;UBERON:0001017!3.76e-08!82;UBERON:0000477!9.41e-08!286;UBERON:0000025!1.32e-07!194;UBERON:0002346!1.67e-07!90;UBERON:0002100!9.70e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000488;1.61e-07;4!UBERON:0002423;6.08e-07;25!UBERON:0002107;7.50e-07;19!UBERON:0006925;7.50e-07;19!UBERON:0007625;8.42e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.34e-07,4;UBERON:0009497,5.52e-07,25;UBERON:0000015,5.52e-07,25;UBERON:0002423,5.52e-07,25;UBERON:0006235,5.52e-07,25;UBERON:0004161,5.52e-07,25;UBERON:0002107,6.61e-07,19;UBERON:0006925,6.61e-07,19;UBERON:0008836,6.61e-07,19;UBERON:0007625,6.78e-07,11 | |||
|phase1_expression=0.54503513781167,1.49870366723688,1.69145284915165,0,3.5756887554183,1.74467704820074,0,0.631719873426831,1.82829939739887,1.22866968250754,0,0,0,1.48519623552056,0.994192127183747,0,0,0,0,1.10808952269109,0.612002073732759,1.25381888591235,4.57977579409691,2.18999080116615,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,4.69490601792545,1.53435074212236,5.06014813338393,2.00535164254356,3.62116297402059,0,2.91980922181582,6.80650683581289,5.76496433402666,5.62142628436007,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,1.19168262731897,8.03142538096678,0,2.24271040056923,0,0.98667019366864,4.97937656639626,0.808264032418128,0.653847612453835,0.302714855289863,1.15235184896,0,0,0,0,0,0.323745888736263,0.140450806702248,0.204154171254893,0,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0.226864366320042,1.4351170855109,0.640672166455702,0.211931901159562,0.600182192168805,0.412210116953756,0.772921620136887,1.30281799432113,1.5189869901714,0.68205903612839,1.51460264546469,0.736399189138395,0.484938170456436,2.13005755509969,1.20902517873168,0,0,0,0,0,0.132529768321485,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,2.94017422771084,1.26755034821831,0,1.18157981336281,0,0,2.91665277507493,0,0,0,0,0,0,2.88662684050547,2.66639931442677,13.9716346140628,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79556075716608,0,3.74887975697556,3.57656445851882,0.845302752556,0.26593811658487,0,0,0,0,4.14636181608628,0.542621605391443,0,0.65147236858747,4.97548728239564,0,3.61727252471503,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,2.54094624222463,0,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,4.17151071845076,0,0.271265023699736,0,0,0,0.117141414992713,1.50473049863859,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.744323423456331,0.767309866440312,1.12264037773229,1.53766979106841,0,3.05622450172854,0,0.462629081407967,0.532685175939381,0.246381468041427,1.55776328755086,0.116210378459959,0,0,0.184161977871793,2.41110341145674,0.546273504020151,1.31124414959424,0,0.462092022626489,0.784349769176855,0,1.47772280450026,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0.831076008928724,0,0,0,0,0.656029291399411,0.325378394664303,0.618246069886334,0.27470839445503,0.165018999841176,0,0,4.82051789532479,1.16004861950546,0.616194468458578,1.5350367472613,0.827019434907183,2.68550612170684,0.580066775656914,1.10794615640931,10.3277161350215,0,0.192190067365106,0,0,0.464845549297286,3.1481234683064,0,1.23213432070436,0,0,0,0.858749320451947,0.372158369359667,0.632758849437452,2.66882271493355,0.255897791311334,5.13526785640705,1.59101623962968,0,1.61885211824983,1.64722217841633,1.64937363283961,0.202182481573316,0,0.421258456238981,0,0,0,1.50149902548784,1.41405431953713,4.52032466480971,1.10273068709225,0,0,0,0,0.202910376962704,0.30982349809975,0,0.430234056612155,0.0982490410131212,0.35667105148125,0,1.68886108238131,1.31717957183961,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0.338583555603207,0,0,0,0,0.614481528616916,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.556543525114529,0,0,1.79323189425963,0.828851746593443,0,0.20453736500431,0,0,0,0,0,0.887790650732402,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0,0,0.689486746482929,1.16641845353302,2.60437492399938,0.885741385813839,0.60298219312704,0,0.221158519862449,0,0.219385397153973,0,0,0.615602068030377,7.63411774174908,0,0,0,0,0,0.533034776018635,0,0.784901281975124,0,0,0,0,0,0,0,0,0,0.216388639742091,1.99052386215701,1.06149077404007,0.611030144933625,0,0,0.104421949505455,0.202203398942031,0.802577647298789,0,0,0,0,0.394584402849391,3.62972148145992,0.61214552326098,7.898322453561,0,0.311064574191741,0,0,0,0,0,0.138674673013139,0,0,0,0.698906672968121,0.687944129886466,0,0,0,0.387956065953678,29.5658024416526,0.90392296312213,1.37041924646751,0,0.443175571691151,0,3.44682927081595,3.41524791582964,0,0,0,1.88754497648161,0,0,0,0.67952103036807,0.313808538937,0,0.288950589901519,0,0,0,0.429765441419957,0,0.558564802544508,0.458320848023367,0,0,0,0.223171457441873,1.74677028465488,1.44119953416961,0,0.709048640765013,1.15382201733633,0.606631894687664,1.47641222272123,0,0.795229689809303,0,0.482259445395058,0.412618309791701,0.83088067605837,0.2249738915515,0.77380195455795,0.425246896606173,0,0.315222829196793,1.62609223218494,0.950403028674658,0.179287339332845,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,3.40776043570843,0.1133120915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| ||
|short_description=p10@GPC6 | |short_description=p10@GPC6 | ||
}} | }} |
Latest revision as of 04:55, 18 September 2015
Short description: | p10@GPC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GPC6_5end |
Coexpression cluster: | C1192_extraskeletal_Cardiac_Lens_cholangiocellular_pineal_Fibroblast_rectum |
Association with transcript: | 42bp_to_ENST00000377047_5end |
EntrezGene: | GPC6 |
HGNC: | 4454 |
UniProt: | Q9Y625 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extracellular matrix secreting cell | 1.91e-10 | 15 |
stromal cell | 1.50e-08 | 28 |
GAG secreting cell | 6.72e-08 | 9 |
carbohydrate secreting cell | 6.72e-08 | 9 |
chondroblast | 4.40e-07 | 6 |
chondrocyte | 4.40e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 1.34e-07 | 4 |
epithelium of foregut-midgut junction | 5.52e-07 | 25 |
anatomical boundary | 5.52e-07 | 25 |
hepatobiliary system | 5.52e-07 | 25 |
foregut-midgut junction | 5.52e-07 | 25 |
septum transversum | 5.52e-07 | 25 |
liver | 6.61e-07 | 19 |
digestive gland | 6.61e-07 | 19 |
liver bud | 6.61e-07 | 19 |
pigment epithelium of eye | 6.78e-07 | 11 |