FFCP PHASE1:Hg19::chr13:93879085..93879136,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10082 | |EntrezGene=10082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4454 | |HGNC=4454 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y625 | |UniProt=Q9Y625 | ||
|association_with_transcript=0bp_to_ENST00000377047_5end | |association_with_transcript=0bp_to_ENST00000377047_5end | ||
|cluster_id=chr13:93879085..93879136,+ | |||
|coexpression_cluster_id=C1192 | |||
|description=CAGE_peak_2_at_GPC6_5end | |description=CAGE_peak_2_at_GPC6_5end | ||
|id=chr13:93879085..93879136,+ | |id=chr13:93879085..93879136,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.18e-23!180;CL:0000057!8.13e-11!75;CL:0000393!2.22e-08!60;CL:0000211!2.22e-08!60;CL:0000680!1.83e-07!57;CL:0000056!1.83e-07!57;CL:0000355!1.83e-07!57;CL:0000187!2.76e-07!54;CL:0002319!3.88e-07!25;CL:0000183!9.40e-07!59 | |ontology_enrichment_celltype=CL:0000055!4.18e-23!180;CL:0000057!8.13e-11!75;CL:0000393!2.22e-08!60;CL:0000211!2.22e-08!60;CL:0000680!1.83e-07!57;CL:0000056!1.83e-07!57;CL:0000355!1.83e-07!57;CL:0000187!2.76e-07!54;CL:0002319!3.88e-07!25;CL:0000183!9.40e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.51e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.53e-10,76;CL:0000393,2.86e-08,61;CL:0000211,2.86e-08,61;CL:0000680,2.45e-07,58;CL:0000056,2.45e-07,58;CL:0000355,2.45e-07,58;CL:0002319,3.75e-07,25;CL:0000187,3.83e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.53e-26!365;UBERON:0000481!3.02e-20!347;UBERON:0000119!1.93e-16!312;UBERON:0000483!3.69e-16!309;UBERON:0000073!1.54e-15!94;UBERON:0001016!1.54e-15!94;UBERON:0005743!2.58e-14!86;UBERON:0001017!8.22e-14!82;UBERON:0000468!1.57e-12!659;UBERON:0002346!1.69e-12!90;UBERON:0003075!9.04e-12!86;UBERON:0007284!9.04e-12!86;UBERON:0000025!1.13e-11!194;UBERON:0000924!1.25e-11!173;UBERON:0006601!1.25e-11!173;UBERON:0000477!5.02e-11!286;UBERON:0004121!5.77e-11!169;UBERON:0002100!1.38e-10!216;UBERON:0000955!1.60e-10!69;UBERON:0006238!1.60e-10!69;UBERON:0004111!2.57e-10!241;UBERON:0005256!3.89e-10!143;UBERON:0000033!6.10e-10!123;UBERON:0000922!1.38e-09!612;UBERON:0003056!1.41e-09!61;UBERON:0000153!1.68e-09!129;UBERON:0007811!1.68e-09!129;UBERON:0001049!1.12e-08!57;UBERON:0005068!1.12e-08!57;UBERON:0006241!1.12e-08!57;UBERON:0007135!1.12e-08!57;UBERON:0002616!1.21e-08!59;UBERON:0002050!1.49e-08!605;UBERON:0005423!1.49e-08!605;UBERON:0000923!2.86e-08!604;UBERON:0005291!2.86e-08!604;UBERON:0006598!2.86e-08!604;UBERON:0002532!2.86e-08!604;UBERON:0002385!7.58e-08!63;UBERON:0001015!7.58e-08!63;UBERON:0000383!7.58e-08!63;UBERON:0001134!1.24e-07!61;UBERON:0002036!1.24e-07!61;UBERON:0003082!1.24e-07!61;UBERON:0000479!2.16e-07!787;UBERON:0000467!2.50e-07!625;UBERON:0000480!3.75e-07!626;UBERON:0000062!4.88e-07!511;UBERON:0002780!5.61e-07!41;UBERON:0001890!5.61e-07!41;UBERON:0006240!5.61e-07!41;UBERON:0003080!7.25e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.51e-15,89;UBERON:0000119,3.02e-15,309;UBERON:0011216,4.34e-15,223;UBERON:0000483,5.76e-15,306;UBERON:0001017,2.77e-14,81;UBERON:0002346,1.73e-13,86;UBERON:0010314,5.86e-13,132;UBERON:0003075,1.15e-12,82;UBERON:0007284,1.15e-12,82;UBERON:0000025,7.96e-12,192;UBERON:0003104,2.73e-11,160;UBERON:0009142,2.73e-11,160;UBERON:0004121,3.21e-11,171;UBERON:0000924,3.21e-11,171;UBERON:0006601,3.21e-11,171;UBERON:0000955,7.57e-11,68;UBERON:0006238,7.57e-11,68;UBERON:0004111,1.56e-10,240;UBERON:0003056,1.16e-09,61;UBERON:0001049,4.11e-09,56;UBERON:0005068,4.11e-09,56;UBERON:0006241,4.11e-09,56;UBERON:0007135,4.11e-09,56;UBERON:0000479,5.59e-09,773;UBERON:0005256,1.73e-08,122;UBERON:0002100,2.76e-08,199;UBERON:0000073,4.59e-08,53;UBERON:0002616,4.59e-08,53;UBERON:0010371,5.43e-08,104;UBERON:0000922,8.17e-08,592;UBERON:0002385,1.46e-07,64;UBERON:0001015,1.46e-07,64;UBERON:0000383,1.46e-07,64;UBERON:0005423,2.38e-07,581;UBERON:0001134,2.44e-07,62;UBERON:0002036,2.44e-07,62;UBERON:0003082,2.44e-07,62;UBERON:0002780,3.18e-07,41;UBERON:0001890,3.18e-07,41;UBERON:0003080,3.18e-07,41;UBERON:0006240,3.18e-07,41 | |||
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| ||
|short_description=p2@GPC6 | |short_description=p2@GPC6 | ||
}} | }} |
Latest revision as of 04:53, 18 September 2015
Short description: | p2@GPC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPC6_5end |
Coexpression cluster: | C1192_extraskeletal_Cardiac_Lens_cholangiocellular_pineal_Fibroblast_rectum |
Association with transcript: | 0bp_to_ENST00000377047_5end |
EntrezGene: | GPC6 |
HGNC: | 4454 |
UniProt: | Q9Y625 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.53e-10 | 76 |
electrically responsive cell | 2.86e-08 | 61 |
electrically active cell | 2.86e-08 | 61 |
muscle precursor cell | 2.45e-07 | 58 |
myoblast | 2.45e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.45e-07 | 58 |
neural cell | 3.75e-07 | 25 |
muscle cell | 3.83e-07 | 55 |