FFCP PHASE1:Hg19::chr19:30206135..30206191,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83636 | |EntrezGene=83636 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25443 | |HGNC=25443 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NSK7,F8W6J3 | |UniProt=Q9NSK7,F8W6J3 | ||
|association_with_transcript=0bp_to_ENST00000323670,ENST00000342680_5end | |association_with_transcript=0bp_to_ENST00000323670,ENST00000342680_5end | ||
|cluster_id=chr19:30206135..30206191,- | |||
|description=CAGE_peak_1_at_C19orf12_5end | |description=CAGE_peak_1_at_C19orf12_5end | ||
|id=chr19:30206135..30206191,- | |id=chr19:30206135..30206191,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!5.40e-09!86;UBERON:0007284!5.40e-09!86;UBERON:0002346!9.31e-09!90;UBERON:0000955!1.54e-08!69;UBERON:0006238!1.54e-08!69;UBERON:0002616!1.79e-08!59;UBERON:0001017!2.29e-08!82;UBERON:0000153!3.89e-08!129;UBERON:0007811!3.89e-08!129;UBERON:0005743!4.77e-08!86;UBERON:0000119!8.63e-08!312;UBERON:0000033!8.69e-08!123;UBERON:0001869!9.79e-08!32;UBERON:0002619!1.19e-07!22;UBERON:0000483!1.22e-07!309;UBERON:0001049!2.45e-07!57;UBERON:0005068!2.45e-07!57;UBERON:0006241!2.45e-07!57;UBERON:0007135!2.45e-07!57;UBERON:0000956!2.62e-07!25;UBERON:0000203!2.62e-07!25;UBERON:0001950!3.01e-07!20;UBERON:0001893!3.46e-07!34;UBERON:0000073!3.94e-07!94;UBERON:0001016!3.94e-07!94;UBERON:0000475!4.23e-07!365;UBERON:0007023!5.05e-07!115;UBERON:0002020!5.22e-07!34;UBERON:0003528!5.22e-07!34;UBERON:0002791!9.80e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.44e-08;22!UBERON:0000956;1.53e-07;25!UBERON:0000203;1.53e-07;25!UBERON:0001950;2.02e-07;20!UBERON:0001869;3.26e-07;32!UBERON:0003528;8.61e-07;34!UBERON:0002020;8.61e-07;34!UBERON:0002791;8.94e-07;32!UBERON:0001893;9.06e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.09e-09,132;UBERON:0003075,1.78e-08,82;UBERON:0007284,1.78e-08,82;UBERON:0002346,3.03e-08,86;UBERON:0000955,4.20e-08,68;UBERON:0006238,4.20e-08,68;UBERON:0001017,5.88e-08,81;UBERON:0001869,9.78e-08,32;UBERON:0002619,1.19e-07,22;UBERON:0000119,2.15e-07,309;UBERON:0000956,2.62e-07,25;UBERON:0000203,2.62e-07,25;UBERON:0001950,3.01e-07,20;UBERON:0000483,3.02e-07,306;UBERON:0001893,3.46e-07,34;UBERON:0000073,3.58e-07,53;UBERON:0002616,3.58e-07,53;UBERON:0001016,5.21e-07,89;UBERON:0003528,5.22e-07,34;UBERON:0002020,5.22e-07,34;UBERON:0002791,5.63e-07,32;UBERON:0001049,6.66e-07,56;UBERON:0005068,6.66e-07,56;UBERON:0006241,6.66e-07,56;UBERON:0007135,6.66e-07,56;UBERON:0007023,8.24e-07,114 | |||
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| ||
|short_description=p1@C19orf12 | |short_description=p1@C19orf12 | ||
}} | }} |
Latest revision as of 03:52, 17 September 2015
Short description: | p1@C19orf12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C19orf12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000323670, ENST00000342680_5end |
EntrezGene: | C19orf12 |
HGNC: | 25443 |
UniProt: | Q9NSK7F8W6J3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.09e-09 | 132 |
neural plate | 1.78e-08 | 82 |
presumptive neural plate | 1.78e-08 | 82 |
neurectoderm | 3.03e-08 | 86 |
brain | 4.20e-08 | 68 |
future brain | 4.20e-08 | 68 |
central nervous system | 5.88e-08 | 81 |
cerebral hemisphere | 9.78e-08 | 32 |
regional part of cerebral cortex | 1.19e-07 | 22 |
cell layer | 2.15e-07 | 309 |
cerebral cortex | 2.62e-07 | 25 |
pallium | 2.62e-07 | 25 |
neocortex | 3.01e-07 | 20 |
epithelium | 3.02e-07 | 306 |
telencephalon | 3.46e-07 | 34 |
regional part of nervous system | 3.58e-07 | 53 |
regional part of brain | 3.58e-07 | 53 |
nervous system | 5.21e-07 | 89 |
brain grey matter | 5.22e-07 | 34 |
gray matter | 5.22e-07 | 34 |
regional part of telencephalon | 5.63e-07 | 32 |
neural tube | 6.66e-07 | 56 |
neural rod | 6.66e-07 | 56 |
future spinal cord | 6.66e-07 | 56 |
neural keel | 6.66e-07 | 56 |
adult organism | 8.24e-07 | 114 |