FFCP PHASE1:Hg19::chr11:121459693..121459707,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:121459693..121459707,+
|short_description=p@chr11:121459693..121459707,+
|description=CAGE_peak_at_chr11:121459693..121459707,+
|association_with_transcri...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:121459693..121459707,+ | |||
|description=CAGE_peak_at_chr11:121459693..121459707,+ | |||
|id=chr11:121459693..121459707,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.47e-30!42;CL:0000763!3.69e-28!112;CL:0000049!3.69e-28!112;CL:0000860!3.82e-28!45;CL:0000037!2.30e-20!172;CL:0000566!2.30e-20!172;CL:0000839!2.05e-19!70;CL:0002032!8.02e-19!165;CL:0000837!8.02e-19!165;CL:0000988!1.02e-18!182;CL:0002194!3.91e-18!63;CL:0000576!3.91e-18!63;CL:0000040!3.91e-18!63;CL:0000559!3.91e-18!63;CL:0000766!1.78e-17!76;CL:0002009!2.03e-17!65;CL:0000557!1.62e-15!71;CL:0002031!1.46e-10!124;CL:0000738!1.19e-09!140;CL:0002087!3.80e-09!119;CL:0000764!1.27e-07!2;CL:0000765!1.27e-07!2;CL:0000050!1.27e-07!2;CL:0000038!1.27e-07!2;CL:0000558!1.27e-07!2;CL:0000547!1.27e-07!2;CL:0000549!1.27e-07!2;CL:0000550!1.27e-07!2;CL:0000552!1.27e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.55e-15;33!CL:0002057;4.55e-15;33!CL:0000037;8.35e-13;1!CL:0001024;8.35e-13;1!CL:0000473;6.69e-11;39!CL:0000234;6.69e-11;39!CL:0000763;2.62e-07;100!CL:0000576;3.61e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.65e-15,108;CL:0000049,2.65e-15,108;CL:0001024,8.85e-13,1;CL:0000037,1.05e-12,168;CL:0000860,4.18e-12,42;CL:0002057,4.18e-12,42;CL:0000988,5.91e-12,177;CL:0002032,1.99e-11,161;CL:0000837,1.99e-11,161;CL:0000473,1.63e-10,48;CL:0000234,1.63e-10,48;CL:0000766,1.05e-08,72;CL:0002194,2.78e-08,59;CL:0000576,2.78e-08,59;CL:0000040,2.78e-08,59;CL:0000559,2.78e-08,59;CL:0002009,5.40e-08,61;CL:0000839,2.39e-07,66;CL:0000557,3.14e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;2.59e-10;42!CL:0000049;8.48e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!4.15e-09!31;DOID:1240!2.09e-08!39;DOID:2531!4.97e-07!51;DOID:0060083!4.97e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1240;9.64e-09;39!DOID:8692;1.09e-08;31!DOID:2531;1.62e-07;51!DOID:0060083;1.62e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.89e-10,39;DOID:8692,5.19e-09,31;DOID:2531,1.41e-07,51;DOID:0060083,1.41e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!8.54e-15!80;UBERON:0001474!2.18e-13!86;UBERON:0002390!1.44e-11!102;UBERON:0003061!1.44e-11!102;UBERON:0004765!1.29e-10!101;UBERON:0001434!1.29e-10!101;UBERON:0002193!4.78e-10!112;UBERON:0002405!1.21e-09!115;UBERON:0001049!1.56e-08!57;UBERON:0005068!1.56e-08!57;UBERON:0006241!1.56e-08!57;UBERON:0007135!1.56e-08!57;UBERON:0002616!3.83e-08!59;UBERON:0000955!2.08e-07!69;UBERON:0006238!2.08e-07!69;UBERON:0001893!6.98e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.11e-08,76;UBERON:0001474,1.42e-07,82;UBERON:0004765,7.95e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,9.39521405871511,0,0,0,0,0,0,1.16318591023652,3.40088349319928,2.42584061187816,0.697287110717054,1.23350366406548,0.929119112685311,0,0.512321413058201,0,0,0,0,1.50593871634084,0.818718450173537,1.12361742222542,0.306083892370903,0.962787081228281,1.27867425159808,0,0.598390972864896,0.852449501065388,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60856642895129,1.12101712596307,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,5.36215036370627,0.423347165447766,16.2310970137278,3.08876895924805,0,0,0,0,0,0.201799707191048,0.425846237690326,9.61814965316141,0,0,0,1.56310476321632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,5.78352179414492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,9.39521405871511,0,0,0,0,0,0,1.16318591023652,3.40088349319928,2.42584061187816,0.697287110717054,1.23350366406548,0.929119112685311,0,0.512321413058201,0,0,0,0,1.50593871634084,0.818718450173537,1.12361742222542,0.306083892370903,0.962787081228281,1.27867425159808,0,0.598390972864896,0.852449501065388,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60856642895129,1.12101712596307,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,5.36215036370627,0.423347165447766,16.2310970137278,3.08876895924805,0,0,0,0,0,0.201799707191048,0.425846237690326,9.61814965316141,0,0,0,1.56310476321632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,5.78352179414492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:121459693..121459707,+ | |||
}} | }} |
Latest revision as of 19:13, 23 July 2015
Short description: | p@chr11:121459693..121459707, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121459693..121459707, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.65e-15 | 108 |
common myeloid progenitor | 2.65e-15 | 108 |
CD34-positive, CD38-negative hematopoietic stem cell | 8.85e-13 | 1 |
hematopoietic stem cell | 1.05e-12 | 168 |
classical monocyte | 4.18e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.18e-12 | 42 |
hematopoietic cell | 5.91e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.99e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-11 | 161 |
defensive cell | 1.63e-10 | 48 |
phagocyte | 1.63e-10 | 48 |
myeloid leukocyte | 1.05e-08 | 72 |
monopoietic cell | 2.78e-08 | 59 |
monocyte | 2.78e-08 | 59 |
monoblast | 2.78e-08 | 59 |
promonocyte | 2.78e-08 | 59 |
macrophage dendritic cell progenitor | 5.40e-08 | 61 |
myeloid lineage restricted progenitor cell | 2.39e-07 | 66 |
granulocyte monocyte progenitor cell | 3.14e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.11e-08 | 76 |
bone element | 1.42e-07 | 82 |
skeletal element | 7.95e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.89e-10 | 39 |
myeloid leukemia | 5.19e-09 | 31 |
hematologic cancer | 1.41e-07 | 51 |
immune system cancer | 1.41e-07 | 51 |